RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ADD2P35612 726 aa20.21■□□□□ 0.83
SDCBP-202ENST00000413219 PDE4BQ07343 736 aa20.21■□□□□ 0.83
SDCBP-202ENST00000413219 SGMS1Q86VZ5 419 aa20.21■□□□□ 0.83
SDCBP-202ENST00000413219 TBC1D10CQ8IV04 446 aa20.21■□□□□ 0.83
SDCBP-202ENST00000413219 TXLNBQ8N3L3 684 aa20.21■□□□□ 0.83
SDCBP-202ENST00000413219 ZNF512BQ96KM6 892 aaPredicted RBP20.21■□□□□ 0.83
SDCBP-202ENST00000413219 ZBTB43O43298 467 aa20.2■□□□□ 0.82
SDCBP-202ENST00000413219 GOLGA8FQ08AF8 430 aa20.2■□□□□ 0.82
SDCBP-202ENST00000413219 GOLGA8DPQ0D2H9 430 aa20.2■□□□□ 0.82
SDCBP-202ENST00000413219 KIFC2Q96AC6 838 aa20.2■□□□□ 0.82
SDCBP-202ENST00000413219 WDR24Q96S15 920 aa20.2■□□□□ 0.82
SDCBP-202ENST00000413219 PLA2G12BQ9BX93 195 aa20.2■□□□□ 0.82
SDCBP-202ENST00000413219 ZBTB3Q9H5J0 574 aa20.2■□□□□ 0.82
SDCBP-202ENST00000413219 MAN1B1Q9UKM7 699 aa20.2■□□□□ 0.82
SDCBP-202ENST00000413219 TULP2O00295 520 aa20.2■□□□□ 0.82
SDCBP-202ENST00000413219 SEC31AO94979 1220 aaKnown RBP20.2■□□□□ 0.82
SDCBP-202ENST00000413219 WASF1Q92558 559 aa20.2■□□□□ 0.82
SDCBP-202ENST00000413219 ARFGAP3Q9NP61 516 aa20.2■□□□□ 0.82
SDCBP-202ENST00000413219 SARSP49591 514 aaKnown RBP20.19■□□□□ 0.82
SDCBP-202ENST00000413219 TRIM28Q13263 835 aaKnown RBP20.19■□□□□ 0.82
SDCBP-202ENST00000413219 POSTNQ15063 836 aa20.19■□□□□ 0.82
SDCBP-202ENST00000413219 TTF1Q15361 905 aaPredicted RBP20.19■□□□□ 0.82
SDCBP-202ENST00000413219 HSP90AB3PQ58FF7 597 aa20.19■□□□□ 0.82
SDCBP-202ENST00000413219 NUTM2AQ8IVF1 878 aaPredicted RBP20.19■□□□□ 0.82
SDCBP-202ENST00000413219 PHKBQ93100 1093 aa20.19■□□□□ 0.82
SDCBP-202ENST00000413219 ECM29Q5VYK3 1845 aa20.19■□□□□ 0.82
SDCBP-202ENST00000413219 UBN2Q6ZU65 1347 aa20.19■□□□□ 0.82
SDCBP-202ENST00000413219 GOLGA8AA7E2F4 631 aa20.18■□□□□ 0.82
SDCBP-202ENST00000413219 A1BGP04217 495 aa20.18■□□□□ 0.82
SDCBP-202ENST00000413219 MORC3Q14149 939 aa20.18■□□□□ 0.82
SDCBP-202ENST00000413219 UBE3CQ15386 1083 aa20.18■□□□□ 0.82
SDCBP-202ENST00000413219 IGDCC4Q8TDY8 1250 aa20.18■□□□□ 0.82
SDCBP-202ENST00000413219 GOLGA1Q92805 767 aa20.18■□□□□ 0.82
SDCBP-202ENST00000413219 NFE2L3Q9Y4A8 694 aa20.18■□□□□ 0.82
SDCBP-202ENST00000413219 NID2Q14112 1375 aa20.18■□□□□ 0.82
SDCBP-202ENST00000413219 KCPQ6ZWJ8 1503 aa20.18■□□□□ 0.82
SDCBP-202ENST00000413219 RANBP6O60518 1105 aaKnown RBP20.18■□□□□ 0.82
SDCBP-202ENST00000413219 SASH3O75995 380 aa20.18■□□□□ 0.82
SDCBP-202ENST00000413219 CSF1RP07333 972 aa20.18■□□□□ 0.82
SDCBP-202ENST00000413219 LIFRP42702 1097 aa20.18■□□□□ 0.82
SDCBP-202ENST00000413219 GPS2Q13227 327 aa20.18■□□□□ 0.82
SDCBP-202ENST00000413219 CT47A1Q5JQC4 288 aaPredicted RBP20.18■□□□□ 0.82
SDCBP-202ENST00000413219 KANK3Q6NY19 840 aa20.18■□□□□ 0.82
SDCBP-202ENST00000413219 TOGARAM2Q6ZUX3 1019 aa20.18■□□□□ 0.82
SDCBP-202ENST00000413219 NOSTRINQ8IVI9 506 aa20.18■□□□□ 0.82
SDCBP-202ENST00000413219 PDILTQ8N807 584 aa20.18■□□□□ 0.82
SDCBP-202ENST00000413219 ZNF579Q8NAF0 562 aaKnown RBP20.18■□□□□ 0.82
SDCBP-202ENST00000413219 CDK11BP21127 795 aaKnown RBP20.17■□□□□ 0.82
SDCBP-202ENST00000413219 PTPREP23469 700 aa20.17■□□□□ 0.82
SDCBP-202ENST00000413219 HNRNPH2P55795 449 aaKnown RBP20.17■□□□□ 0.82
SDCBP-202ENST00000413219 SSRP1Q08945 709 aaKnown RBP20.17■□□□□ 0.82
SDCBP-202ENST00000413219 ALX1Q15699 326 aa20.17■□□□□ 0.82
SDCBP-202ENST00000413219 MICU3Q86XE3 530 aa20.17■□□□□ 0.82
SDCBP-202ENST00000413219 PANX2Q96RD6 677 aa20.17■□□□□ 0.82
SDCBP-202ENST00000413219 LY9Q9HBG7 655 aa20.17■□□□□ 0.82
SDCBP-202ENST00000413219 FAM217BQ9NTX9 383 aaPredicted RBP20.17■□□□□ 0.82
SDCBP-202ENST00000413219 RAI14Q9P0K7 980 aa20.17■□□□□ 0.82
SDCBP-202ENST00000413219 ERVV-2B6SEH9 535 aa20.17■□□□□ 0.82
SDCBP-202ENST00000413219 FMNL1O95466 1100 aaPredicted RBP20.17■□□□□ 0.82
SDCBP-202ENST00000413219 OAS2P29728 719 aaKnown RBP20.17■□□□□ 0.82
SDCBP-202ENST00000413219 IRX5P78411 483 aaPredicted RBP20.17■□□□□ 0.82
SDCBP-202ENST00000413219 TCIRG1Q13488 830 aa20.17■□□□□ 0.82
SDCBP-202ENST00000413219 SMC1AQ14683 1233 aaKnown RBP20.17■□□□□ 0.82
SDCBP-202ENST00000413219 TAF7LQ5H9L4 462 aa20.17■□□□□ 0.82
SDCBP-202ENST00000413219 MUM1L1Q5H9M0 696 aa20.17■□□□□ 0.82
SDCBP-202ENST00000413219 FAM177A1Q8N128 213 aaPredicted RBP20.17■□□□□ 0.82
SDCBP-202ENST00000413219 STK11IPQ8N1F8 1099 aa20.17■□□□□ 0.82
SDCBP-202ENST00000413219 SMARCE1Q969G3 411 aa20.17■□□□□ 0.82
SDCBP-202ENST00000413219 TMEM51Q9NW97 253 aa20.17■□□□□ 0.82
SDCBP-202ENST00000413219 RIC1Q4ADV7 1423 aa20.17■□□□□ 0.82
SDCBP-202ENST00000413219 POLR3GO15318 223 aaPredicted RBP20.16■□□□□ 0.82
SDCBP-202ENST00000413219 PCCAP05165 728 aaPredicted RBP20.16■□□□□ 0.82
SDCBP-202ENST00000413219 ERCC5P28715 1186 aaPredicted RBP20.16■□□□□ 0.82
SDCBP-202ENST00000413219 MCAMP43121 646 aa20.16■□□□□ 0.82
SDCBP-202ENST00000413219 SLC20A2Q08357 652 aa20.16■□□□□ 0.82
SDCBP-202ENST00000413219 BRD3Q15059 726 aa20.16■□□□□ 0.82
SDCBP-202ENST00000413219 SAFBQ15424 915 aaKnown RBP eCLIP20.16■□□□□ 0.82
SDCBP-202ENST00000413219 PARD6BQ9BYG5 372 aa20.16■□□□□ 0.82
SDCBP-202ENST00000413219 TSPYL1Q9H0U9 437 aa20.16■□□□□ 0.82
SDCBP-202ENST00000413219 FBXO2Q9UK22 296 aaPredicted RBP20.16■□□□□ 0.82
SDCBP-202ENST00000413219 DENND2AQ9ULE3 1009 aa20.16■□□□□ 0.82
SDCBP-202ENST00000413219 PAPPAQ13219 1627 aa20.16■□□□□ 0.82
SDCBP-202ENST00000413219 CCDC151A5D8V7 595 aa20.15■□□□□ 0.82
SDCBP-202ENST00000413219 B4E1Z4 1266 aa20.15■□□□□ 0.82
SDCBP-202ENST00000413219 FOXN1O15353 648 aa20.15■□□□□ 0.82
SDCBP-202ENST00000413219 IFNAR1P17181 557 aa20.15■□□□□ 0.82
SDCBP-202ENST00000413219 RXRAP19793 462 aa20.15■□□□□ 0.82
SDCBP-202ENST00000413219 TXLNAP40222 546 aa20.15■□□□□ 0.82
SDCBP-202ENST00000413219 FMR1Q06787 632 aaKnown RBP eCLIP20.15■□□□□ 0.82
SDCBP-202ENST00000413219 IFIT5Q13325 482 aaKnown RBP20.15■□□□□ 0.82
SDCBP-202ENST00000413219 TUBB2AQ13885 445 aa20.15■□□□□ 0.82
SDCBP-202ENST00000413219 NR1I3Q14994 352 aa20.15■□□□□ 0.82
SDCBP-202ENST00000413219 SLC9C2Q5TAH2 1124 aa20.15■□□□□ 0.82
SDCBP-202ENST00000413219 PI16Q6UXB8 463 aa20.15■□□□□ 0.82
SDCBP-202ENST00000413219 NFXL1Q6ZNB6 911 aa20.15■□□□□ 0.82
SDCBP-202ENST00000413219 TUBB2BQ9BVA1 445 aa20.15■□□□□ 0.82
SDCBP-202ENST00000413219 NAA15Q9BXJ9 866 aaKnown RBP20.15■□□□□ 0.82
SDCBP-202ENST00000413219 FUT8Q9BYC5 575 aa20.15■□□□□ 0.82
SDCBP-202ENST00000413219 A0A1B0GTH6 734 aa20.15■□□□□ 0.82
SDCBP-202ENST00000413219 CCDC175P0C221 793 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms