RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 TRPM4Q8TD43 1214 aa14.99□□□□□ -0.01
PMS1-204ENST00000409823 DICER1Q9UPY3 1922 aaKnown RBP14.98□□□□□ -0.01
PMS1-204ENST00000409823 TIAM2Q8IVF5 1701 aa14.98□□□□□ -0.01
PMS1-204ENST00000409823 H7C1D1 291 aa14.98□□□□□ -0.01
PMS1-204ENST00000409823 IGSF3O75054 1194 aa14.98□□□□□ -0.01
PMS1-204ENST00000409823 SLURP2P0DP57 97 aa14.98□□□□□ -0.01
PMS1-204ENST00000409823 ZKSCAN1P17029 563 aaPredicted RBP14.98□□□□□ -0.01
PMS1-204ENST00000409823 DDRGK1Q96HY6 314 aa14.98□□□□□ -0.01
PMS1-204ENST00000409823 NBPF3Q9H094 633 aa14.98□□□□□ -0.01
PMS1-204ENST00000409823 ATP8A2Q9NTI2 1148 aa14.98□□□□□ -0.01
PMS1-204ENST00000409823 ZNF280AP59817 542 aaPredicted RBP14.98□□□□□ -0.01
PMS1-204ENST00000409823 RNF20Q5VTR2 975 aa14.98□□□□□ -0.01
PMS1-204ENST00000409823 STOX1Q6ZVD7 989 aa14.98□□□□□ -0.01
PMS1-204ENST00000409823 MKRN1Q9UHC7 482 aaKnown RBP14.98□□□□□ -0.01
PMS1-204ENST00000409823 CTNNA3Q9UI47 895 aa14.98□□□□□ -0.01
PMS1-204ENST00000409823 DCAF8L1A6NGE4 600 aa14.97□□□□□ -0.01
PMS1-204ENST00000409823 PLCD1P51178 756 aa14.97□□□□□ -0.01
PMS1-204ENST00000409823 KIF4BQ2VIQ3 1234 aa14.97□□□□□ -0.01
PMS1-204ENST00000409823 TBC1D10CQ8IV04 446 aa14.97□□□□□ -0.01
PMS1-204ENST00000409823 JAKMIP1Q96N16 626 aaKnown RBP14.97□□□□□ -0.01
PMS1-204ENST00000409823 NKX2-3Q8TAU0 364 aa14.97□□□□□ -0.01
PMS1-204ENST00000409823 TCEANC2Q96MN5 208 aa14.97□□□□□ -0.01
PMS1-204ENST00000409823 ZNF70Q9UC06 446 aaPredicted RBP14.97□□□□□ -0.01
PMS1-204ENST00000409823 FAM198AQ9UFP1 575 aa14.97□□□□□ -0.01
PMS1-204ENST00000409823 BAZ2AQ9UIF9 1905 aaKnown RBP14.97□□□□□ -0.01
PMS1-204ENST00000409823 PRDM1O75626 825 aa14.96□□□□□ -0.01
PMS1-204ENST00000409823 POLR3DP05423 398 aaPredicted RBP14.96□□□□□ -0.01
PMS1-204ENST00000409823 PPARAQ07869 468 aa14.96□□□□□ -0.01
PMS1-204ENST00000409823 ZSCAN29Q8IWY8 852 aaPredicted RBP14.96□□□□□ -0.01
PMS1-204ENST00000409823 TACC3Q9Y6A5 838 aa14.96□□□□□ -0.01
PMS1-204ENST00000409823 CASTP20810 708 aaKnown RBP14.96□□□□□ -0.01
PMS1-204ENST00000409823 LMOD1P29536 600 aaPredicted RBP14.96□□□□□ -0.01
PMS1-204ENST00000409823 ALX1Q15699 326 aa14.96□□□□□ -0.01
PMS1-204ENST00000409823 CHST3Q7LGC8 479 aa14.96□□□□□ -0.01
PMS1-204ENST00000409823 ZNF526Q8TF50 670 aaPredicted RBP14.96□□□□□ -0.01
PMS1-204ENST00000409823 DYNLL2Q96FJ2 89 aa14.96□□□□□ -0.01
PMS1-204ENST00000409823 TOMM22Q9NS69 142 aa14.96□□□□□ -0.01
PMS1-204ENST00000409823 GLTPD2A6NH11 291 aa14.96□□□□□ -0.02
PMS1-204ENST00000409823 E7EWF7 191 aa14.96□□□□□ -0.02
PMS1-204ENST00000409823 MYO1BO43795 1136 aa14.96□□□□□ -0.02
PMS1-204ENST00000409823 HIRAP54198 1017 aaPredicted RBP14.96□□□□□ -0.02
PMS1-204ENST00000409823 RRP12Q5JTH9 1297 aaKnown RBP14.96□□□□□ -0.02
PMS1-204ENST00000409823 EPB41L2O43491 1005 aaKnown RBP14.95□□□□□ -0.02
PMS1-204ENST00000409823 CERS3Q8IU89 383 aa14.95□□□□□ -0.02
PMS1-204ENST00000409823 CDAN1Q8IWY9 1227 aa14.95□□□□□ -0.02
PMS1-204ENST00000409823 SPDYE2Q495Y8 402 aa14.95□□□□□ -0.02
PMS1-204ENST00000409823 SLC44A5Q8NCS7 719 aa14.95□□□□□ -0.02
PMS1-204ENST00000409823 ZBED3Q96IU2 234 aaPredicted RBP14.95□□□□□ -0.02
PMS1-204ENST00000409823 OSBPL5Q9H0X9 879 aaPredicted RBP14.95□□□□□ -0.02
PMS1-204ENST00000409823 TMOD2Q9NZR1 351 aa14.95□□□□□ -0.02
PMS1-204ENST00000409823 DDTLA6NHG4 134 aaPredicted RBP14.94□□□□□ -0.02
PMS1-204ENST00000409823 NEK4P51957 841 aa14.94□□□□□ -0.02
PMS1-204ENST00000409823 GIMAP6Q6P9H5 292 aa14.94□□□□□ -0.02
PMS1-204ENST00000409823 MTMR14Q8NCE2 650 aa14.94□□□□□ -0.02
PMS1-204ENST00000409823 LARP6Q9BRS8 491 aaKnown RBP14.94□□□□□ -0.02
PMS1-204ENST00000409823 TMEM39BQ9GZU3 492 aa14.94□□□□□ -0.02
PMS1-204ENST00000409823 HACL1Q9UJ83 578 aa14.94□□□□□ -0.02
PMS1-204ENST00000409823 NEDD4P46934 1319 aa14.94□□□□□ -0.02
PMS1-204ENST00000409823 FAM196BA6NMK8 535 aa14.94□□□□□ -0.02
PMS1-204ENST00000409823 NOL8Q76FK4 1167 aaKnown RBP14.94□□□□□ -0.02
PMS1-204ENST00000409823 LRRC2Q9BYS8 371 aa14.94□□□□□ -0.02
PMS1-204ENST00000409823 ARPP21Q9UBL0 812 aaPredicted RBP14.94□□□□□ -0.02
PMS1-204ENST00000409823 ANAPC15P60006 121 aa14.93□□□□□ -0.02
PMS1-204ENST00000409823 C12orf60Q5U649 245 aa14.93□□□□□ -0.02
PMS1-204ENST00000409823 ANGEL2Q5VTE6 544 aaKnown RBP14.93□□□□□ -0.02
PMS1-204ENST00000409823 SH3BP5LQ7L8J4 393 aa14.93□□□□□ -0.02
PMS1-204ENST00000409823 KCNB2Q92953 911 aa14.93□□□□□ -0.02
PMS1-204ENST00000409823 IDI2Q9BXS1 227 aa14.93□□□□□ -0.02
PMS1-204ENST00000409823 RPAP1Q9BWH6 1393 aaPredicted RBP14.93□□□□□ -0.02
PMS1-204ENST00000409823 CD2BP2O95400 341 aaKnown RBP14.93□□□□□ -0.02
PMS1-204ENST00000409823 PRAMEF18Q5VWM3 479 aa14.93□□□□□ -0.02
PMS1-204ENST00000409823 DLK2Q6UY11 383 aa14.93□□□□□ -0.02
PMS1-204ENST00000409823 NEK1Q96PY6 1258 aa14.93□□□□□ -0.02
PMS1-204ENST00000409823 B4E1Z4 1266 aa14.92□□□□□ -0.02
PMS1-204ENST00000409823 MFSD6Q6ZSS7 791 aa14.92□□□□□ -0.02
PMS1-204ENST00000409823 AMOTL1Q8IY63 956 aa14.92□□□□□ -0.02
PMS1-204ENST00000409823 GGA3Q9NZ52 723 aa14.92□□□□□ -0.02
PMS1-204ENST00000409823 ZMYM6O95789 1325 aa14.92□□□□□ -0.02
PMS1-204ENST00000409823 EAPPQ56P03 285 aaPredicted RBP14.92□□□□□ -0.02
PMS1-204ENST00000409823 AKNAD1Q5T1N1 836 aa14.92□□□□□ -0.02
PMS1-204ENST00000409823 ADARB2Q9NS39 739 aaKnown RBP14.92□□□□□ -0.02
PMS1-204ENST00000409823 CNTNAP1P78357 1384 aa14.91□□□□□ -0.02
PMS1-204ENST00000409823 EPHX2P34913 555 aa14.91□□□□□ -0.02
PMS1-204ENST00000409823 RASA3Q14644 834 aa14.91□□□□□ -0.02
PMS1-204ENST00000409823 TSGA10IPQ3SY00 556 aa14.91□□□□□ -0.02
PMS1-204ENST00000409823 SBK1Q52WX2 424 aa14.91□□□□□ -0.02
PMS1-204ENST00000409823 CSRNP1Q96S65 589 aa14.91□□□□□ -0.02
PMS1-204ENST00000409823 CDK5RAP2Q96SN8 1893 aa14.91□□□□□ -0.02
PMS1-204ENST00000409823 POTECB2RU33 542 aa14.9□□□□□ -0.02
PMS1-204ENST00000409823 KDM4AO75164 1064 aa14.9□□□□□ -0.02
PMS1-204ENST00000409823 TRDNQ13061 729 aa14.9□□□□□ -0.02
PMS1-204ENST00000409823 BLOC1S2Q6QNY1 142 aa14.9□□□□□ -0.02
PMS1-204ENST00000409823 RALYLQ86SE5 291 aaKnown RBP14.9□□□□□ -0.02
PMS1-204ENST00000409823 L3MBTL3Q96JM7 780 aaPredicted RBP14.9□□□□□ -0.02
PMS1-204ENST00000409823 ZKSCAN3Q9BRR0 538 aa14.9□□□□□ -0.02
PMS1-204ENST00000409823 RANBP6O60518 1105 aaKnown RBP14.9□□□□□ -0.02
PMS1-204ENST00000409823 KRT32Q14532 448 aa14.9□□□□□ -0.02
PMS1-204ENST00000409823 FAM47AQ5JRC9 791 aa14.9□□□□□ -0.02
PMS1-204ENST00000409823 MIGA2Q7L4E1 593 aa14.9□□□□□ -0.02
PMS1-204ENST00000409823 CYP46A1Q9Y6A2 500 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms