RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 NKX2-3Q8TAU0 364 aa15.77■□□□□ 0.11
CHRNA1-205ENST00000409542 U2AF1L4Q8WU68 220 aaKnown RBP15.77■□□□□ 0.11
CHRNA1-205ENST00000409542 LPIN2Q92539 896 aa15.77■□□□□ 0.11
CHRNA1-205ENST00000409542 CRBNQ96SW2 442 aa15.77■□□□□ 0.11
CHRNA1-205ENST00000409542 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.77■□□□□ 0.11
CHRNA1-205ENST00000409542 ATRNL1Q5VV63 1379 aa15.77■□□□□ 0.11
CHRNA1-205ENST00000409542 SLC5A1P13866 664 aa15.76■□□□□ 0.11
CHRNA1-205ENST00000409542 SH3BP5LQ7L8J4 393 aa15.76■□□□□ 0.11
CHRNA1-205ENST00000409542 PARK7Q99497 189 aaKnown RBP15.76■□□□□ 0.11
CHRNA1-205ENST00000409542 CXCL11O14625 94 aa15.75■□□□□ 0.11
CHRNA1-205ENST00000409542 ZBTB7BO15156 539 aaPredicted RBP15.75■□□□□ 0.11
CHRNA1-205ENST00000409542 ELNP15502 786 aa15.75■□□□□ 0.11
CHRNA1-205ENST00000409542 FCGRTP55899 365 aa15.75■□□□□ 0.11
CHRNA1-205ENST00000409542 UBXN2AP68543 259 aa15.75■□□□□ 0.11
CHRNA1-205ENST00000409542 ZHX2Q9Y6X8 837 aa15.75■□□□□ 0.11
CHRNA1-205ENST00000409542 COL6A3P12111 3177 aa15.75■□□□□ 0.11
CHRNA1-205ENST00000409542 A0A0G2JLL6 359 aaPredicted RBP15.74■□□□□ 0.11
CHRNA1-205ENST00000409542 FARP2O94887 1054 aaPredicted RBP15.74■□□□□ 0.11
CHRNA1-205ENST00000409542 SGPL1O95470 568 aa15.74■□□□□ 0.11
CHRNA1-205ENST00000409542 PTPRAP18433 802 aa15.74■□□□□ 0.11
CHRNA1-205ENST00000409542 PHKA1P46020 1223 aa15.74■□□□□ 0.11
CHRNA1-205ENST00000409542 PRRT2Q7Z6L0 340 aaPredicted RBP15.74■□□□□ 0.11
CHRNA1-205ENST00000409542 CCDC84Q86UT8 332 aaPredicted RBP15.74■□□□□ 0.11
CHRNA1-205ENST00000409542 HTATIP2Q9BUP3 242 aa15.74■□□□□ 0.11
CHRNA1-205ENST00000409542 SIL1Q9H173 461 aa15.74■□□□□ 0.11
CHRNA1-205ENST00000409542 AFG3L2Q9Y4W6 797 aa15.74■□□□□ 0.11
CHRNA1-205ENST00000409542 DOCK3Q8IZD9 2030 aa15.73■□□□□ 0.11
CHRNA1-205ENST00000409542 DDTLA6NHG4 134 aaPredicted RBP15.73■□□□□ 0.11
CHRNA1-205ENST00000409542 SOX1O00570 391 aaPredicted RBP15.73■□□□□ 0.11
CHRNA1-205ENST00000409542 ADCY3O60266 1144 aa15.73■□□□□ 0.11
CHRNA1-205ENST00000409542 LDHBP07195 334 aaKnown RBP15.73■□□□□ 0.11
CHRNA1-205ENST00000409542 FLT3LGP49771 235 aa15.73■□□□□ 0.11
CHRNA1-205ENST00000409542 RGS3P49796 1198 aa15.73■□□□□ 0.11
CHRNA1-205ENST00000409542 GADL1Q6ZQY3 521 aa15.73■□□□□ 0.11
CHRNA1-205ENST00000409542 SCYL3Q8IZE3 742 aa15.73■□□□□ 0.11
CHRNA1-205ENST00000409542 SLAIN1Q8ND83 568 aa15.73■□□□□ 0.11
CHRNA1-205ENST00000409542 SSH1Q8WYL5 1049 aa15.73■□□□□ 0.11
CHRNA1-205ENST00000409542 DDX4Q9NQI0 724 aaKnown RBP15.73■□□□□ 0.11
CHRNA1-205ENST00000409542 PHIPQ8WWQ0 1821 aa15.73■□□□□ 0.11
CHRNA1-205ENST00000409542 DOCK2Q92608 1830 aa15.73■□□□□ 0.11
CHRNA1-205ENST00000409542 INHAP05111 366 aa15.72■□□□□ 0.11
CHRNA1-205ENST00000409542 MS4A1P11836 297 aa15.72■□□□□ 0.11
CHRNA1-205ENST00000409542 PTPRFP10586 1907 aa15.72■□□□□ 0.11
CHRNA1-205ENST00000409542 MYH2Q9UKX2 1941 aa15.72■□□□□ 0.11
CHRNA1-205ENST00000409542 LAMA3Q16787 3333 aa15.72■□□□□ 0.11
CHRNA1-205ENST00000409542 PTPRCP08575 1304 aa15.72■□□□□ 0.11
CHRNA1-205ENST00000409542 ADORA1P30542 326 aa15.71■□□□□ 0.11
CHRNA1-205ENST00000409542 MAP3K10Q02779 954 aa15.71■□□□□ 0.11
CHRNA1-205ENST00000409542 ATP2B3Q16720 1220 aa15.71■□□□□ 0.11
CHRNA1-205ENST00000409542 IDI2Q9BXS1 227 aa15.71■□□□□ 0.11
CHRNA1-205ENST00000409542 SALL1Q9NSC2 1324 aa15.71■□□□□ 0.11
CHRNA1-205ENST00000409542 RFX7Q2KHR2 1363 aa15.71■□□□□ 0.11
CHRNA1-205ENST00000409542 ALPK3Q96L96 1907 aa15.71■□□□□ 0.11
CHRNA1-205ENST00000409542 FASTKD5Q7L8L6 764 aaKnown RBP15.71■□□□□ 0.1
CHRNA1-205ENST00000409542 LRCH3Q96II8 777 aa15.71■□□□□ 0.1
CHRNA1-205ENST00000409542 DEFB118Q96PH6 123 aa15.71■□□□□ 0.1
CHRNA1-205ENST00000409542 PA2G4Q9UQ80 394 aaKnown RBP15.71■□□□□ 0.1
CHRNA1-205ENST00000409542 NR2E3Q9Y5X4 410 aa15.71■□□□□ 0.1
CHRNA1-205ENST00000409542 GAKO14976 1311 aa15.7■□□□□ 0.1
CHRNA1-205ENST00000409542 ENTPD3O75355 529 aa15.7■□□□□ 0.1
CHRNA1-205ENST00000409542 TFRCP02786 760 aaKnown RBP15.7■□□□□ 0.1
CHRNA1-205ENST00000409542 DIS3LQ8TF46 1054 aaKnown RBP15.7■□□□□ 0.1
CHRNA1-205ENST00000409542 PICK1Q9NRD5 415 aa15.7■□□□□ 0.1
CHRNA1-205ENST00000409542 STAP2Q9UGK3 403 aa15.7■□□□□ 0.1
CHRNA1-205ENST00000409542 DENND2AQ9ULE3 1009 aa15.7■□□□□ 0.1
CHRNA1-205ENST00000409542 TRIM75PA6NK02 468 aa15.69■□□□□ 0.1
CHRNA1-205ENST00000409542 TNPO2O14787 897 aaKnown RBP15.69■□□□□ 0.1
CHRNA1-205ENST00000409542 IRF5Q13568 498 aa15.69■□□□□ 0.1
CHRNA1-205ENST00000409542 TREML2Q5T2D2 321 aa15.69■□□□□ 0.1
CHRNA1-205ENST00000409542 C20orf194Q5TEA3 1177 aa15.69■□□□□ 0.1
CHRNA1-205ENST00000409542 ZSCAN29Q8IWY8 852 aaPredicted RBP15.69■□□□□ 0.1
CHRNA1-205ENST00000409542 PIAS4Q8N2W9 510 aaPredicted RBP15.69■□□□□ 0.1
CHRNA1-205ENST00000409542 ANKRD13CQ8N6S4 541 aa15.69■□□□□ 0.1
CHRNA1-205ENST00000409542 PXYLP1Q8TE99 480 aa15.69■□□□□ 0.1
CHRNA1-205ENST00000409542 CRISPLD2Q9H0B8 497 aa15.69■□□□□ 0.1
CHRNA1-205ENST00000409542 PAK6Q9NQU5 681 aaPredicted RBP15.69■□□□□ 0.1
CHRNA1-205ENST00000409542 CEP126Q9P2H0 1117 aa15.69■□□□□ 0.1
CHRNA1-205ENST00000409542 LRRFIP2Q9Y608 721 aaKnown RBP15.69■□□□□ 0.1
CHRNA1-205ENST00000409542 A0A0C4DFX4 3053 aa15.69■□□□□ 0.1
CHRNA1-205ENST00000409542 DOCK1Q14185 1865 aa15.68■□□□□ 0.1
CHRNA1-205ENST00000409542 FAM196BA6NMK8 535 aa15.68■□□□□ 0.1
CHRNA1-205ENST00000409542 EVI5O60447 810 aa15.68■□□□□ 0.1
CHRNA1-205ENST00000409542 CIAO1O76071 339 aa15.68■□□□□ 0.1
CHRNA1-205ENST00000409542 PICALMQ13492 652 aa15.68■□□□□ 0.1
CHRNA1-205ENST00000409542 CCDC102BQ68D86 513 aa15.68■□□□□ 0.1
CHRNA1-205ENST00000409542 ZNF384Q8TF68 577 aa15.68■□□□□ 0.1
CHRNA1-205ENST00000409542 PAWRQ96IZ0 340 aaKnown RBP15.68■□□□□ 0.1
CHRNA1-205ENST00000409542 GNL3LQ9NVN8 582 aaKnown RBP15.68■□□□□ 0.1
CHRNA1-205ENST00000409542 TAOK2Q9UL54 1235 aa15.68■□□□□ 0.1
CHRNA1-205ENST00000409542 SLC45A1Q9Y2W3 748 aa15.68■□□□□ 0.1
CHRNA1-205ENST00000409542 CTNND1O60716 968 aaKnown RBP15.67■□□□□ 0.1
CHRNA1-205ENST00000409542 BTDP43251 543 aa15.67■□□□□ 0.1
CHRNA1-205ENST00000409542 TIMM10P62072 90 aa15.67■□□□□ 0.1
CHRNA1-205ENST00000409542 RASGRF1Q13972 1273 aa15.67■□□□□ 0.1
CHRNA1-205ENST00000409542 SLC17A8Q8NDX2 589 aa15.67■□□□□ 0.1
CHRNA1-205ENST00000409542 SEMA3EO15041 775 aa15.66■□□□□ 0.1
CHRNA1-205ENST00000409542 RHBDL3P58872 404 aa15.66■□□□□ 0.1
CHRNA1-205ENST00000409542 TRIM32Q13049 653 aa15.66■□□□□ 0.1
CHRNA1-205ENST00000409542 RRP1BQ14684 758 aaKnown RBP15.66■□□□□ 0.1
CHRNA1-205ENST00000409542 SMCR8Q8TEV9 937 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms