RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 TRAPPC3LQ5T215 181 aa18.71■□□□□ 0.59
PTPRN2-205ENST00000409483 MAPKAPK5Q8IW41 473 aa18.71■□□□□ 0.59
PTPRN2-205ENST00000409483 CPSF1Q10570 1443 aaKnown RBP18.71■□□□□ 0.59
PTPRN2-205ENST00000409483 BTBD18B2RXH4 712 aa18.71■□□□□ 0.59
PTPRN2-205ENST00000409483 CHMP4BP1P59074 171 aa18.71■□□□□ 0.59
PTPRN2-205ENST00000409483 TXLNBQ8N3L3 684 aa18.71■□□□□ 0.59
PTPRN2-205ENST00000409483 GUCA1BQ9UMX6 200 aa18.71■□□□□ 0.59
PTPRN2-205ENST00000409483 QRICH2Q9H0J4 1663 aa18.71■□□□□ 0.59
PTPRN2-205ENST00000409483 PTPN21Q16825 1174 aa18.71■□□□□ 0.59
PTPRN2-205ENST00000409483 PPP1R9BQ96SB3 815 aa18.71■□□□□ 0.59
PTPRN2-205ENST00000409483 PCDHA7Q9UN72 937 aa18.71■□□□□ 0.59
PTPRN2-205ENST00000409483 NFE2L3Q9Y4A8 694 aa18.71■□□□□ 0.59
PTPRN2-205ENST00000409483 CLIC4Q9Y696 253 aa18.71■□□□□ 0.59
PTPRN2-205ENST00000409483 TMCO5BA8MYB1 307 aa18.71■□□□□ 0.58
PTPRN2-205ENST00000409483 FGFR1OPO95684 399 aaKnown RBP18.71■□□□□ 0.58
PTPRN2-205ENST00000409483 C6orf50Q9HD87 102 aa18.71■□□□□ 0.58
PTPRN2-205ENST00000409483 PUS7LQ9H0K6 701 aaKnown RBP18.7■□□□□ 0.58
PTPRN2-205ENST00000409483 GJB4Q9NTQ9 266 aa18.7■□□□□ 0.58
PTPRN2-205ENST00000409483 ARAP3Q8WWN8 1544 aa18.7■□□□□ 0.58
PTPRN2-205ENST00000409483 GOLGA6L9A6NEM1 432 aa18.7■□□□□ 0.58
PTPRN2-205ENST00000409483 PFKFB1P16118 471 aa18.7■□□□□ 0.58
PTPRN2-205ENST00000409483 PAFAH1B1P43034 410 aa18.7■□□□□ 0.58
PTPRN2-205ENST00000409483 ZNF274Q96GC6 653 aaPredicted RBP18.7■□□□□ 0.58
PTPRN2-205ENST00000409483 ANKRD2Q9GZV1 360 aa18.7■□□□□ 0.58
PTPRN2-205ENST00000409483 PDE8BO95263 885 aa18.7■□□□□ 0.58
PTPRN2-205ENST00000409483 NECTIN1Q15223 517 aa18.7■□□□□ 0.58
PTPRN2-205ENST00000409483 ZMYM1Q5SVZ6 1142 aa18.7■□□□□ 0.58
PTPRN2-205ENST00000409483 RRP36Q96EU6 259 aaKnown RBP18.7■□□□□ 0.58
PTPRN2-205ENST00000409483 XPO4Q9C0E2 1151 aaKnown RBP18.7■□□□□ 0.58
PTPRN2-205ENST00000409483 NRBP1Q9UHY1 535 aa18.7■□□□□ 0.58
PTPRN2-205ENST00000409483 CCDC175P0C221 793 aa18.69■□□□□ 0.58
PTPRN2-205ENST00000409483 CTAGE1Q96RT6 745 aa18.69■□□□□ 0.58
PTPRN2-205ENST00000409483 MROH5Q6ZUA9 1318 aa18.69■□□□□ 0.58
PTPRN2-205ENST00000409483 ZNF654Q8IZM8 581 aa18.69■□□□□ 0.58
PTPRN2-205ENST00000409483 PYM1Q9BRP8 204 aaKnown RBP18.69■□□□□ 0.58
PTPRN2-205ENST00000409483 CTNND2Q9UQB3 1225 aa18.69■□□□□ 0.58
PTPRN2-205ENST00000409483 CHGBP05060 677 aa18.69■□□□□ 0.58
PTPRN2-205ENST00000409483 NDUFA8P51970 172 aa18.69■□□□□ 0.58
PTPRN2-205ENST00000409483 PRPF4BQ13523 1007 aaKnown RBP18.69■□□□□ 0.58
PTPRN2-205ENST00000409483 WDR78Q5VTH9 848 aa18.69■□□□□ 0.58
PTPRN2-205ENST00000409483 GIGYF2Q6Y7W6 1299 aaKnown RBP18.69■□□□□ 0.58
PTPRN2-205ENST00000409483 CAPZA3Q96KX2 299 aa18.69■□□□□ 0.58
PTPRN2-205ENST00000409483 BLZF1Q9H2G9 400 aa18.69■□□□□ 0.58
PTPRN2-205ENST00000409483 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.69■□□□□ 0.588e-7■■□□□ 12.5
PTPRN2-205ENST00000409483 MAP3K15Q6ZN16 1313 aa18.69■□□□□ 0.58
PTPRN2-205ENST00000409483 BAG1Q99933 345 aaPredicted RBP18.68■□□□□ 0.58
PTPRN2-205ENST00000409483 FBXO3Q9UK99 471 aa18.68■□□□□ 0.58
PTPRN2-205ENST00000409483 MYO6Q9UM54 1294 aa18.68■□□□□ 0.58
PTPRN2-205ENST00000409483 IBSPP21815 317 aaPredicted RBP18.68■□□□□ 0.58
PTPRN2-205ENST00000409483 PPARAQ07869 468 aa18.68■□□□□ 0.58
PTPRN2-205ENST00000409483 ZNF569Q5MCW4 686 aa18.68■□□□□ 0.58
PTPRN2-205ENST00000409483 NPHP4O75161 1426 aaPredicted RBP18.68■□□□□ 0.58
PTPRN2-205ENST00000409483 TFAP4Q01664 338 aa18.68■□□□□ 0.58
PTPRN2-205ENST00000409483 SPAG1Q07617 926 aa18.68■□□□□ 0.58
PTPRN2-205ENST00000409483 LONRF3Q496Y0 759 aa18.68■□□□□ 0.58
PTPRN2-205ENST00000409483 NSUN7Q8NE18 718 aaKnown RBP18.68■□□□□ 0.58
PTPRN2-205ENST00000409483 AIFM3Q96NN9 605 aa18.68■□□□□ 0.58
PTPRN2-205ENST00000409483 GBP3Q9H0R5 595 aa18.68■□□□□ 0.58
PTPRN2-205ENST00000409483 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.68■□□□□ 0.582e-6■□□□□ 10.4
PTPRN2-205ENST00000409483 PRKAB2O43741 272 aa18.68■□□□□ 0.58
PTPRN2-205ENST00000409483 RPS8P62241 208 aaKnown RBP18.68■□□□□ 0.58
PTPRN2-205ENST00000409483 TGFBRAP1Q8WUH2 860 aa18.68■□□□□ 0.58
PTPRN2-205ENST00000409483 HLTFQ14527 1009 aaKnown RBP eCLIP18.67■□□□□ 0.588e-7■■■□□ 15.4
PTPRN2-205ENST00000409483 TTC38Q5R3I4 469 aa18.67■□□□□ 0.58
PTPRN2-205ENST00000409483 SERTAD1Q9UHV2 236 aa18.67■□□□□ 0.58
PTPRN2-205ENST00000409483 PPRC1Q5VV67 1664 aaKnown RBP18.67■□□□□ 0.58
PTPRN2-205ENST00000409483 ERLIN2O94905 339 aa18.67■□□□□ 0.58
PTPRN2-205ENST00000409483 ADALQ6DHV7 355 aa18.67■□□□□ 0.58
PTPRN2-205ENST00000409483 SPAG5Q96R06 1193 aa18.67■□□□□ 0.58
PTPRN2-205ENST00000409483 KIAA1468Q9P260 1216 aa18.67■□□□□ 0.58
PTPRN2-205ENST00000409483 MACROD2A1Z1Q3 448 aa18.67■□□□□ 0.58
PTPRN2-205ENST00000409483 CUTAO60888 179 aa18.67■□□□□ 0.58
PTPRN2-205ENST00000409483 FAM114A1Q8IWE2 563 aa18.67■□□□□ 0.58
PTPRN2-205ENST00000409483 ZDHHC9Q9Y397 364 aa18.67■□□□□ 0.58
PTPRN2-205ENST00000409483 CHRNDQ07001 517 aa18.66■□□□□ 0.58
PTPRN2-205ENST00000409483 IGSF22Q8N9C0 903 aa18.66■□□□□ 0.58
PTPRN2-205ENST00000409483 PIGBQ92521 554 aa18.66■□□□□ 0.58
PTPRN2-205ENST00000409483 EEF2KMTQ96G04 330 aa18.66■□□□□ 0.58
PTPRN2-205ENST00000409483 BMS1Q14692 1282 aaKnown RBP18.66■□□□□ 0.58
PTPRN2-205ENST00000409483 KRT79Q5XKE5 535 aa18.66■□□□□ 0.58
PTPRN2-205ENST00000409483 SYCP3Q8IZU3 236 aa18.66■□□□□ 0.58
PTPRN2-205ENST00000409483 VEZTQ9HBM0 779 aa18.66■□□□□ 0.58
PTPRN2-205ENST00000409483 PARP1P09874 1014 aaKnown RBP18.66■□□□□ 0.58
PTPRN2-205ENST00000409483 RHOXF2BP0C7M4 288 aa18.66■□□□□ 0.58
PTPRN2-205ENST00000409483 FBXO18Q8NFZ0 1043 aa18.66■□□□□ 0.58
PTPRN2-205ENST00000409483 RHOXF2Q9BQY4 288 aa18.66■□□□□ 0.58
PTPRN2-205ENST00000409483 ZMYND15Q9H091 742 aa18.66■□□□□ 0.58
PTPRN2-205ENST00000409483 LOC102724428A0A0B4J2F2 783 aa18.66■□□□□ 0.58
PTPRN2-205ENST00000409483 U2AF2P26368 475 aaKnown RBP eCLIP18.66■□□□□ 0.581e-7■■■□□ 18.2
PTPRN2-205ENST00000409483 SIK1P57059 783 aa18.66■□□□□ 0.58
PTPRN2-205ENST00000409483 TXKP42681 527 aa18.65■□□□□ 0.58
PTPRN2-205ENST00000409483 NLRP12P59046 1061 aa18.65■□□□□ 0.58
PTPRN2-205ENST00000409483 TNIP1Q15025 636 aa18.65■□□□□ 0.58
PTPRN2-205ENST00000409483 VPS36Q86VN1 386 aa18.65■□□□□ 0.58
PTPRN2-205ENST00000409483 RBM28Q9NW13 759 aaKnown RBP18.65■□□□□ 0.58
PTPRN2-205ENST00000409483 PYCARDQ9ULZ3 195 aa18.65■□□□□ 0.58
PTPRN2-205ENST00000409483 TNKSO95271 1327 aa18.65■□□□□ 0.58
PTPRN2-205ENST00000409483 WDR17Q8IZU2 1322 aa18.65■□□□□ 0.58
PTPRN2-205ENST00000409483 POSTNQ15063 836 aa18.65■□□□□ 0.58
PTPRN2-205ENST00000409483 CARD10Q9BWT7 1032 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms