RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 PDIA3P30101 505 aaKnown RBP17.74■□□□□ 0.43
LIMS2-205ENST00000409455 GNG11P61952 73 aa17.74■□□□□ 0.43
LIMS2-205ENST00000409455 MAP3K9P80192 1104 aa17.74■□□□□ 0.43
LIMS2-205ENST00000409455 EXOSC10Q01780 885 aaKnown RBP17.74■□□□□ 0.43
LIMS2-205ENST00000409455 MYL5Q02045 173 aa17.74■□□□□ 0.43
LIMS2-205ENST00000409455 JAKMIP3Q5VZ66 844 aa17.74■□□□□ 0.43
LIMS2-205ENST00000409455 RABGGTAQ92696 567 aa17.74■□□□□ 0.43
LIMS2-205ENST00000409455 PSD3Q9NYI0 1048 aa17.74■□□□□ 0.43
LIMS2-205ENST00000409455 NDUFB9Q9Y6M9 179 aa17.74■□□□□ 0.43
LIMS2-205ENST00000409455 MYO1CO00159 1063 aa17.74■□□□□ 0.43
LIMS2-205ENST00000409455 ONECUT3O60422 494 aaPredicted RBP17.74■□□□□ 0.43
LIMS2-205ENST00000409455 TNNI3KQ59H18 835 aa17.74■□□□□ 0.43
LIMS2-205ENST00000409455 VSTM4Q8IW00 320 aa17.74■□□□□ 0.43
LIMS2-205ENST00000409455 ZNF594Q96JF6 807 aaPredicted RBP17.74■□□□□ 0.43
LIMS2-205ENST00000409455 CCDC85AQ96PX6 553 aaPredicted RBP17.74■□□□□ 0.43
LIMS2-205ENST00000409455 MRFAP1Q9Y605 127 aa17.74■□□□□ 0.43
LIMS2-205ENST00000409455 FPGT-TNNI3KV9GXZ4 949 aa17.74■□□□□ 0.43
LIMS2-205ENST00000409455 SH3TC1Q8TE82 1336 aa17.74■□□□□ 0.43
LIMS2-205ENST00000409455 CHGBP05060 677 aa17.73■□□□□ 0.43
LIMS2-205ENST00000409455 POLR3DP05423 398 aaPredicted RBP17.73■□□□□ 0.43
LIMS2-205ENST00000409455 GOLGA1Q92805 767 aa17.73■□□□□ 0.43
LIMS2-205ENST00000409455 HSD3B7Q9H2F3 369 aa17.73■□□□□ 0.43
LIMS2-205ENST00000409455 EFCC1Q9HA90 598 aa17.73■□□□□ 0.43
LIMS2-205ENST00000409455 RSPH14Q9UHP6 348 aa17.73■□□□□ 0.43
LIMS2-205ENST00000409455 PFKFB1P16118 471 aa17.73■□□□□ 0.43
LIMS2-205ENST00000409455 LMAN1P49257 510 aa17.73■□□□□ 0.43
LIMS2-205ENST00000409455 SYNE3Q6ZMZ3 975 aa17.73■□□□□ 0.43
LIMS2-205ENST00000409455 RSRC2Q7L4I2 434 aaKnown RBP17.73■□□□□ 0.43
LIMS2-205ENST00000409455 BRAPQ7Z569 592 aa17.73■□□□□ 0.43
LIMS2-205ENST00000409455 SEPT12Q8IYM1 358 aa17.73■□□□□ 0.43
LIMS2-205ENST00000409455 ZNF34Q8IZ26 560 aa17.73■□□□□ 0.43
LIMS2-205ENST00000409455 LINC00116Q8NCU8 138 aa17.73■□□□□ 0.43
LIMS2-205ENST00000409455 FBXO18Q8NFZ0 1043 aa17.73■□□□□ 0.43
LIMS2-205ENST00000409455 FUT8Q9BYC5 575 aa17.73■□□□□ 0.43
LIMS2-205ENST00000409455 PARD6BQ9BYG5 372 aa17.73■□□□□ 0.43
LIMS2-205ENST00000409455 QTRT2Q9H974 415 aaKnown RBP17.73■□□□□ 0.43
LIMS2-205ENST00000409455 TRMT112Q9UI30 125 aaKnown RBP17.73■□□□□ 0.43
LIMS2-205ENST00000409455 LAMA4Q16363 1823 aa17.73■□□□□ 0.43
LIMS2-205ENST00000409455 UBN2Q6ZU65 1347 aa17.73■□□□□ 0.43
LIMS2-205ENST00000409455 ISM2Q6H9L7 571 aa17.72■□□□□ 0.43
LIMS2-205ENST00000409455 DDX46Q7L014 1031 aaKnown RBP17.72■□□□□ 0.43
LIMS2-205ENST00000409455 ATG9AQ7Z3C6 839 aa17.72■□□□□ 0.43
LIMS2-205ENST00000409455 C10orf67Q8IYJ2 551 aa17.72■□□□□ 0.43
LIMS2-205ENST00000409455 DPF2Q92785 391 aa17.72■□□□□ 0.43
LIMS2-205ENST00000409455 C8orf76Q96K31 380 aa17.72■□□□□ 0.43
LIMS2-205ENST00000409455 ADAM21Q9UKJ8 722 aa17.72■□□□□ 0.43
LIMS2-205ENST00000409455 MYO1BO43795 1136 aa17.72■□□□□ 0.43
LIMS2-205ENST00000409455 CMA1P23946 247 aa17.72■□□□□ 0.43
LIMS2-205ENST00000409455 WDR24Q96S15 920 aa17.72■□□□□ 0.43
LIMS2-205ENST00000409455 HAUS7Q99871 368 aa17.72■□□□□ 0.43
LIMS2-205ENST00000409455 PLA2G12BQ9BX93 195 aa17.72■□□□□ 0.43
LIMS2-205ENST00000409455 THSD7AQ9UPZ6 1657 aa17.72■□□□□ 0.43
LIMS2-205ENST00000409455 CAMTA2O94983 1202 aa17.71■□□□□ 0.43
LIMS2-205ENST00000409455 FDPSP14324 419 aaKnown RBP17.71■□□□□ 0.43
LIMS2-205ENST00000409455 CCDC57Q2TAC2 916 aa17.71■□□□□ 0.43
LIMS2-205ENST00000409455 LRRC24Q50LG9 513 aa17.71■□□□□ 0.43
LIMS2-205ENST00000409455 MYSM1Q5VVJ2 828 aa17.71■□□□□ 0.43
LIMS2-205ENST00000409455 DSCC1Q9BVC3 393 aa17.71■□□□□ 0.43
LIMS2-205ENST00000409455 MYH14Q7Z406 1995 aaKnown RBP17.71■□□□□ 0.43
LIMS2-205ENST00000409455 ATRNO75882 1429 aa17.71■□□□□ 0.43
LIMS2-205ENST00000409455 CCDC151A5D8V7 595 aa17.71■□□□□ 0.43
LIMS2-205ENST00000409455 E7EWF7 191 aa17.71■□□□□ 0.43
LIMS2-205ENST00000409455 CSF1RP07333 972 aa17.71■□□□□ 0.43
LIMS2-205ENST00000409455 BAG1Q99933 345 aaPredicted RBP17.71■□□□□ 0.43
LIMS2-205ENST00000409455 TXLNAP40222 546 aa17.7■□□□□ 0.42
LIMS2-205ENST00000409455 GOLGA8FQ08AF8 430 aa17.7■□□□□ 0.42
LIMS2-205ENST00000409455 GOLGA8DPQ0D2H9 430 aa17.7■□□□□ 0.42
LIMS2-205ENST00000409455 LONRF2Q1L5Z9 754 aa17.7■□□□□ 0.42
LIMS2-205ENST00000409455 KBTBD3Q8NAB2 608 aa17.7■□□□□ 0.42
LIMS2-205ENST00000409455 PUS3Q9BZE2 481 aaKnown RBP17.7■□□□□ 0.42
LIMS2-205ENST00000409455 IRS4O14654 1257 aaPredicted RBP17.7■□□□□ 0.42
LIMS2-205ENST00000409455 OTUD7BQ6GQQ9 843 aa17.7■□□□□ 0.42
LIMS2-205ENST00000409455 LEKR1Q6ZMV7 388 aa17.7■□□□□ 0.42
LIMS2-205ENST00000409455 SRLQ86TD4 932 aa17.7■□□□□ 0.42
LIMS2-205ENST00000409455 TMEM139Q8IV31 216 aa17.7■□□□□ 0.42
LIMS2-205ENST00000409455 TUBE1Q9UJT0 475 aa17.7■□□□□ 0.42
LIMS2-205ENST00000409455 CDHR2Q9BYE9 1310 aa17.7■□□□□ 0.42
LIMS2-205ENST00000409455 EYA2O00167 538 aa17.69■□□□□ 0.42
LIMS2-205ENST00000409455 ACTN2P35609 894 aa17.69■□□□□ 0.42
LIMS2-205ENST00000409455 SYKP43405 635 aa17.69■□□□□ 0.42
LIMS2-205ENST00000409455 GYS2P54840 703 aa17.69■□□□□ 0.42
LIMS2-205ENST00000409455 BRD3Q15059 726 aa17.69■□□□□ 0.42
LIMS2-205ENST00000409455 ANO1Q5XXA6 986 aa17.69■□□□□ 0.42
LIMS2-205ENST00000409455 OLFM4Q6UX06 510 aa17.69■□□□□ 0.42
LIMS2-205ENST00000409455 CHST3Q7LGC8 479 aa17.69■□□□□ 0.42
LIMS2-205ENST00000409455 DHX16O60231 1041 aaKnown RBP17.69■□□□□ 0.42
LIMS2-205ENST00000409455 STX10O60499 249 aa17.69■□□□□ 0.42
LIMS2-205ENST00000409455 IL15P40933 162 aaPredicted RBP17.69■□□□□ 0.42
LIMS2-205ENST00000409455 AXDND1Q5T1B0 1012 aaPredicted RBP17.69■□□□□ 0.42
LIMS2-205ENST00000409455 SUSD4Q5VX71 490 aa17.69■□□□□ 0.42
LIMS2-205ENST00000409455 TTLL11Q8NHH1 800 aa17.69■□□□□ 0.42
LIMS2-205ENST00000409455 HELLSQ9NRZ9 838 aa17.69■□□□□ 0.42
LIMS2-205ENST00000409455 LCMT1Q9UIC8 334 aa17.69■□□□□ 0.42
LIMS2-205ENST00000409455 TMEM232C9JQI7 657 aa17.68■□□□□ 0.42
LIMS2-205ENST00000409455 TRIM66O15016 1216 aa17.68■□□□□ 0.42
LIMS2-205ENST00000409455 SMIM5Q71RC9 77 aa17.68■□□□□ 0.42
LIMS2-205ENST00000409455 DBNDD2Q9BQY9 259 aa17.68■□□□□ 0.42
LIMS2-205ENST00000409455 RRP15Q9Y3B9 282 aaKnown RBP17.68■□□□□ 0.42
LIMS2-205ENST00000409455 IVLP07476 585 aa17.68■□□□□ 0.42
LIMS2-205ENST00000409455 IFIT5Q13325 482 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms