RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 ZSCAN20P17040 1043 aaPredicted RBP4.47□□□□□ -1.69
RTN4-209ENST00000405240 HAND2P61296 217 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 GUCY1B3Q02153 619 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 CEBPZQ03701 1054 aaKnown RBP4.47□□□□□ -1.69
RTN4-209ENST00000405240 FUT2Q10981 343 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 SEC23AQ15436 765 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 CT47A1Q5JQC4 288 aaPredicted RBP4.47□□□□□ -1.69
RTN4-209ENST00000405240 TMED8Q6PL24 325 aaPredicted RBP4.47□□□□□ -1.69
RTN4-209ENST00000405240 METTL16Q86W50 562 aaKnown RBP4.47□□□□□ -1.69
RTN4-209ENST00000405240 VPS37DQ86XT2 251 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 FOXP4Q8IVH2 680 aaPredicted RBP4.47□□□□□ -1.69
RTN4-209ENST00000405240 SPATA5Q8NB90 893 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 CCDC150Q8NCX0 1101 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 SHISA4Q96DD7 197 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 NOL10Q9BSC4 688 aaKnown RBP4.47□□□□□ -1.69
RTN4-209ENST00000405240 FOXP1Q9H334 677 aaPredicted RBP4.47□□□□□ -1.69
RTN4-209ENST00000405240 GJB4Q9NTQ9 266 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 PDS5AQ29RF7 1337 aaKnown RBP4.47□□□□□ -1.69
RTN4-209ENST00000405240 KIF2AO00139 706 aaPredicted RBP4.47□□□□□ -1.69
RTN4-209ENST00000405240 MMP1P03956 469 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 SKILP12757 684 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 ZNF18P17022 549 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 GNAT2P19087 354 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 BMP6P22004 513 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 METAP2P50579 478 aaKnown RBP eCLIP4.47□□□□□ -1.69
RTN4-209ENST00000405240 FGD1P98174 961 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 STK38Q15208 465 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 SF3A1Q15459 793 aaKnown RBP4.47□□□□□ -1.69
RTN4-209ENST00000405240 WASHC4Q2M389 1173 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 CEP135Q66GS9 1140 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 FCHSD1Q86WN1 690 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 ALG1Q9BT22 464 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 CNNM2Q9H8M5 875 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 ZSWIM5Q9P217 1185 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 FBXO2Q9UK22 296 aaPredicted RBP4.47□□□□□ -1.69
RTN4-209ENST00000405240 TBC1D2BQ9UPU7 963 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 NHSQ6T4R5 1651 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 A0A087WWV3 80 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 CAMTA2O94983 1202 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 SLC3A2P08195 630 aaKnown RBP4.47□□□□□ -1.69
RTN4-209ENST00000405240 SLC5A1P13866 664 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 RASGRF1Q13972 1273 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 DNTTIP2Q5QJE6 756 aaKnown RBP4.47□□□□□ -1.69
RTN4-209ENST00000405240 AKNAD1Q5T1N1 836 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 KRBA2Q6ZNG9 492 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 SH3RF1Q7Z6J0 888 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 NAV1Q8NEY1 1877 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 AIFM3Q96NN9 605 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 KRT23Q9C075 422 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 XPO4Q9C0E2 1151 aaKnown RBP4.47□□□□□ -1.69
RTN4-209ENST00000405240 INTS13Q9NVM9 706 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 ZBTB1Q9Y2K1 713 aa4.47□□□□□ -1.69
RTN4-209ENST00000405240 IRS2Q9Y4H2 1338 aa4.46□□□□□ -1.69
RTN4-209ENST00000405240 NTSR2O95665 410 aa4.46□□□□□ -1.69
RTN4-209ENST00000405240 POLR3DP05423 398 aaPredicted RBP4.46□□□□□ -1.69
RTN4-209ENST00000405240 PTPREP23469 700 aa4.46□□□□□ -1.69
RTN4-209ENST00000405240 DMTNQ08495 405 aa4.46□□□□□ -1.69
RTN4-209ENST00000405240 CHAF1AQ13111 956 aaPredicted RBP4.46□□□□□ -1.69
RTN4-209ENST00000405240 PPP2R5BQ15173 497 aa4.46□□□□□ -1.69
RTN4-209ENST00000405240 TPRNQ4KMQ1 711 aa4.46□□□□□ -1.69
RTN4-209ENST00000405240 SUSD4Q5VX71 490 aa4.46□□□□□ -1.69
RTN4-209ENST00000405240 TRIM65Q6PJ69 517 aa4.46□□□□□ -1.69
RTN4-209ENST00000405240 RALYLQ86SE5 291 aaKnown RBP4.46□□□□□ -1.69
RTN4-209ENST00000405240 VSTM4Q8IW00 320 aa4.46□□□□□ -1.69
RTN4-209ENST00000405240 TNFRSF25Q93038 417 aa4.46□□□□□ -1.69
RTN4-209ENST00000405240 ZMYND15Q9H091 742 aa4.46□□□□□ -1.69
RTN4-209ENST00000405240 ZBTB43O43298 467 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 MORC3Q14149 939 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 GORABQ5T7V8 394 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 NOSTRINQ8IVI9 506 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 CRACR2BQ8N4Y2 399 aaPredicted RBP4.46□□□□□ -1.7
RTN4-209ENST00000405240 PPP1R13BQ96KQ4 1090 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 MED15Q96RN5 788 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 DDX41Q9UJV9 622 aaKnown RBP4.46□□□□□ -1.7
RTN4-209ENST00000405240 CCDC9Q9Y3X0 531 aaKnown RBP4.46□□□□□ -1.7
RTN4-209ENST00000405240 LRRC37AA6NMS7 1700 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 LTBP1Q14766 1721 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 PHLPP2Q6ZVD8 1323 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 ZNF335Q9H4Z2 1342 aaPredicted RBP4.46□□□□□ -1.7
RTN4-209ENST00000405240 B4E1Z4 1266 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 FANCGO15287 622 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 ACTN4O43707 911 aaKnown RBP4.46□□□□□ -1.7
RTN4-209ENST00000405240 FECHP22830 423 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 FANCCQ00597 558 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 PLCB2Q00722 1185 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 LONRF3Q496Y0 759 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 APTXQ7Z2E3 356 aaKnown RBP4.46□□□□□ -1.7
RTN4-209ENST00000405240 REXO1L1PQ8IX06 675 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 PDCL2Q8N4E4 241 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 JMYQ8N9B5 988 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 TRIML1Q8N9V2 468 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 WASF1Q92558 559 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 ERCC4Q92889 916 aaPredicted RBP4.46□□□□□ -1.7
RTN4-209ENST00000405240 C16orf45Q96MC5 204 aaPredicted RBP4.46□□□□□ -1.7
RTN4-209ENST00000405240 CGNQ9P2M7 1197 aaKnown RBP4.46□□□□□ -1.7
RTN4-209ENST00000405240 THRAP3Q9Y2W1 955 aaKnown RBP4.46□□□□□ -1.7
RTN4-209ENST00000405240 SRPRBQ9Y5M8 271 aaKnown RBP4.46□□□□□ -1.7
RTN4-209ENST00000405240 THSD7AQ9UPZ6 1657 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 BTAF1O14981 1849 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 QSER1Q2KHR3 1735 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms