RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 CCDC158Q5M9N0 1113 aa22.93■■□□□ 1.26
CCDC47-202ENST00000403162 ANO1Q5XXA6 986 aa22.93■■□□□ 1.26
CCDC47-202ENST00000403162 TMC6Q7Z403 805 aa22.93■■□□□ 1.26
CCDC47-202ENST00000403162 PPP1R13BQ96KQ4 1090 aa22.93■■□□□ 1.26
CCDC47-202ENST00000403162 PUS3Q9BZE2 481 aaKnown RBP22.93■■□□□ 1.26
CCDC47-202ENST00000403162 FBXO3Q9UK99 471 aa22.93■■□□□ 1.26
CCDC47-202ENST00000403162 MYH7P12883 1935 aa22.92■■□□□ 1.26
CCDC47-202ENST00000403162 IKBKBO14920 756 aa22.92■■□□□ 1.26
CCDC47-202ENST00000403162 SFPQP23246 707 aaKnown RBP eCLIP22.92■■□□□ 1.26
CCDC47-202ENST00000403162 ANTXR2P58335 489 aa22.92■■□□□ 1.26
CCDC47-202ENST00000403162 KIF23Q02241 960 aaPredicted RBP22.92■■□□□ 1.26
CCDC47-202ENST00000403162 FKBP4Q02790 459 aaKnown RBP eCLIP22.92■■□□□ 1.26
CCDC47-202ENST00000403162 DEFB132Q7Z7B7 95 aa22.92■■□□□ 1.26
CCDC47-202ENST00000403162 NCOA7Q8NI08 942 aa22.92■■□□□ 1.26
CCDC47-202ENST00000403162 AKT1S1Q96B36 256 aa22.92■■□□□ 1.26
CCDC47-202ENST00000403162 HAND2P61296 217 aa22.91■■□□□ 1.26
CCDC47-202ENST00000403162 TTC39AQ5SRH9 613 aa22.91■■□□□ 1.26
CCDC47-202ENST00000403162 FAM89AQ96GI7 184 aa22.91■■□□□ 1.26
CCDC47-202ENST00000403162 TIGD1Q96MW7 591 aa22.91■■□□□ 1.26
CCDC47-202ENST00000403162 FAM53CQ9NYF3 392 aa22.91■■□□□ 1.26
CCDC47-202ENST00000403162 AKAP2Q9Y2D5 859 aa22.91■■□□□ 1.26
CCDC47-202ENST00000403162 SCN7AQ01118 1682 aa22.91■■□□□ 1.26
CCDC47-202ENST00000403162 KIF28PB7ZC32 967 aa22.91■■□□□ 1.26
CCDC47-202ENST00000403162 CPLX1O14810 134 aa22.91■■□□□ 1.26
CCDC47-202ENST00000403162 NRDCO43847 1150 aa22.91■■□□□ 1.26
CCDC47-202ENST00000403162 PCCAP05165 728 aaPredicted RBP22.91■■□□□ 1.26
CCDC47-202ENST00000403162 PFKFB1P16118 471 aa22.91■■□□□ 1.26
CCDC47-202ENST00000403162 WASHC4Q2M389 1173 aa22.91■■□□□ 1.26
CCDC47-202ENST00000403162 ZBTB38Q8NAP3 1195 aaPredicted RBP22.91■■□□□ 1.26
CCDC47-202ENST00000403162 APPBP2Q92624 585 aa22.91■■□□□ 1.26
CCDC47-202ENST00000403162 TRMT112Q9UI30 125 aaKnown RBP22.91■■□□□ 1.26
CCDC47-202ENST00000403162 ELF2Q15723 593 aa22.9■■□□□ 1.26
CCDC47-202ENST00000403162 BICDL1Q6ZP65 573 aa22.9■■□□□ 1.26
CCDC47-202ENST00000403162 RGL2O15211 777 aa22.9■■□□□ 1.26
CCDC47-202ENST00000403162 SLC39A14Q15043 492 aa22.9■■□□□ 1.26
CCDC47-202ENST00000403162 PARP10Q53GL7 1025 aa22.9■■□□□ 1.26
CCDC47-202ENST00000403162 SUSD4Q5VX71 490 aa22.9■■□□□ 1.26
CCDC47-202ENST00000403162 RALYLQ86SE5 291 aaKnown RBP22.9■■□□□ 1.26
CCDC47-202ENST00000403162 KRT222Q8N1A0 295 aa22.9■■□□□ 1.26
CCDC47-202ENST00000403162 TBC1D9BQ66K14 1250 aa22.89■■□□□ 1.26
CCDC47-202ENST00000403162 FBXO38Q6PIJ6 1188 aa22.89■■□□□ 1.26
CCDC47-202ENST00000403162 XAGE2Q96GT9 111 aa22.89■■□□□ 1.26
CCDC47-202ENST00000403162 BIN1O00499 593 aa22.89■■□□□ 1.25
CCDC47-202ENST00000403162 GORABQ5T7V8 394 aa22.89■■□□□ 1.25
CCDC47-202ENST00000403162 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.89■■□□□ 1.25
CCDC47-202ENST00000403162 TUBE1Q9UJT0 475 aa22.89■■□□□ 1.25
CCDC47-202ENST00000403162 V9GYY5 206 aaPredicted RBP22.89■■□□□ 1.25
CCDC47-202ENST00000403162 MROH7-TTC4A0A0A0MT08 1334 aa22.89■■□□□ 1.25
CCDC47-202ENST00000403162 ADORA1P30542 326 aa22.88■■□□□ 1.25
CCDC47-202ENST00000403162 CCDC93Q567U6 631 aa22.88■■□□□ 1.25
CCDC47-202ENST00000403162 SYNE4Q8N205 404 aa22.88■■□□□ 1.25
CCDC47-202ENST00000403162 UTP14AQ9BVJ6 771 aaKnown RBP22.88■■□□□ 1.25
CCDC47-202ENST00000403162 CCDC57Q2TAC2 916 aa22.87■■□□□ 1.25
CCDC47-202ENST00000403162 GJB4Q9NTQ9 266 aa22.87■■□□□ 1.25
CCDC47-202ENST00000403162 ZMYM6O95789 1325 aa22.87■■□□□ 1.25
CCDC47-202ENST00000403162 ZNF213O14771 459 aa22.87■■□□□ 1.25
CCDC47-202ENST00000403162 WDHD1O75717 1129 aaPredicted RBP22.87■■□□□ 1.25
CCDC47-202ENST00000403162 FANCCQ00597 558 aa22.87■■□□□ 1.25
CCDC47-202ENST00000403162 PUS7LQ9H0K6 701 aaKnown RBP22.87■■□□□ 1.25
CCDC47-202ENST00000403162 HPSEQ9Y251 543 aa22.87■■□□□ 1.25
CCDC47-202ENST00000403162 FAM237AA0A1B0GTK4 181 aa22.86■■□□□ 1.25
CCDC47-202ENST00000403162 CCP110O43303 1012 aa22.86■■□□□ 1.25
CCDC47-202ENST00000403162 PPP6R2O75170 966 aa22.86■■□□□ 1.25
CCDC47-202ENST00000403162 CCDC125Q86Z20 511 aa22.86■■□□□ 1.25
CCDC47-202ENST00000403162 HSD3B7Q9H2F3 369 aa22.86■■□□□ 1.25
CCDC47-202ENST00000403162 SETDB2Q96T68 719 aa22.86■■□□□ 1.25
CCDC47-202ENST00000403162 GPAA1O43292 621 aa22.85■■□□□ 1.25
CCDC47-202ENST00000403162 ZAP70P43403 619 aa22.85■■□□□ 1.25
CCDC47-202ENST00000403162 SYKP43405 635 aa22.85■■□□□ 1.25
CCDC47-202ENST00000403162 SCARF1Q14162 830 aa22.85■■□□□ 1.25
CCDC47-202ENST00000403162 SYT10Q6XYQ8 523 aa22.85■■□□□ 1.25
CCDC47-202ENST00000403162 CDHR2Q9BYE9 1310 aa22.85■■□□□ 1.25
CCDC47-202ENST00000403162 IRS4O14654 1257 aaPredicted RBP22.84■■□□□ 1.25
CCDC47-202ENST00000403162 SLFN14P0C7P3 912 aa22.84■■□□□ 1.25
CCDC47-202ENST00000403162 LMOD1P29536 600 aaPredicted RBP22.84■■□□□ 1.25
CCDC47-202ENST00000403162 JMYQ8N9B5 988 aa22.84■■□□□ 1.25
CCDC47-202ENST00000403162 CBFA2T2O43439 604 aa22.84■■□□□ 1.25
CCDC47-202ENST00000403162 MYO1BO43795 1136 aa22.84■■□□□ 1.25
CCDC47-202ENST00000403162 H2AFXP16104 143 aaPredicted RBP22.84■■□□□ 1.25
CCDC47-202ENST00000403162 RAB11FIP4Q86YS3 637 aa22.84■■□□□ 1.25
CCDC47-202ENST00000403162 ANGEL1Q9UNK9 670 aaKnown RBP22.84■■□□□ 1.25
CCDC47-202ENST00000403162 CDKL5O76039 1030 aa22.83■■□□□ 1.25
CCDC47-202ENST00000403162 NTSR2O95665 410 aa22.83■■□□□ 1.25
CCDC47-202ENST00000403162 GYS1P13807 737 aa22.83■■□□□ 1.25
CCDC47-202ENST00000403162 COL23A1Q86Y22 540 aaPredicted RBP22.83■■□□□ 1.25
CCDC47-202ENST00000403162 STK32BQ9NY57 414 aa22.83■■□□□ 1.25
CCDC47-202ENST00000403162 ECM29Q5VYK3 1845 aa22.83■■□□□ 1.25
CCDC47-202ENST00000403162 PHLPP2Q6ZVD8 1323 aa22.83■■□□□ 1.25
CCDC47-202ENST00000403162 IGSF3O75054 1194 aa22.83■■□□□ 1.24
CCDC47-202ENST00000403162 MARCKSP29966 332 aaPredicted RBP22.83■■□□□ 1.24
CCDC47-202ENST00000403162 MYL5Q02045 173 aa22.83■■□□□ 1.24
CCDC47-202ENST00000403162 PTPAQ15257 358 aa22.83■■□□□ 1.24
CCDC47-202ENST00000403162 ZNF771Q7L3S4 317 aaPredicted RBP22.83■■□□□ 1.24
CCDC47-202ENST00000403162 VPS37DQ86XT2 251 aa22.83■■□□□ 1.24
CCDC47-202ENST00000403162 FLAD1Q8NFF5 587 aa22.83■■□□□ 1.24
CCDC47-202ENST00000403162 ALG1Q9BT22 464 aa22.83■■□□□ 1.24
CCDC47-202ENST00000403162 ATP1A3P13637 1013 aa22.82■■□□□ 1.24
CCDC47-202ENST00000403162 TRDNQ13061 729 aa22.82■■□□□ 1.24
CCDC47-202ENST00000403162 NBPF3Q9H094 633 aa22.82■■□□□ 1.24
CCDC47-202ENST00000403162 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.82■■□□□ 1.247e-9■□□□□ 11.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms