RNA–Protein interactions for RNA: ENST00000402458.1

SNU13-204, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 3 BASIC

Gene SNU13, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-204ENST00000402458 STRBPQ96SI9 672 aaKnown RBP16.34■□□□□ 0.21
SNU13-204ENST00000402458 SEC62Q99442 399 aaKnown RBP16.34■□□□□ 0.21
SNU13-204ENST00000402458 ATP8A2Q9NTI2 1148 aa16.34■□□□□ 0.21
SNU13-204ENST00000402458 SCAF8Q9UPN6 1271 aaKnown RBP16.34■□□□□ 0.21
SNU13-204ENST00000402458 SLC4A4Q9Y6R1 1079 aa16.34■□□□□ 0.21
SNU13-204ENST00000402458 A0A0D9SFI3 127 aa16.33■□□□□ 0.2
SNU13-204ENST00000402458 APPP05067 770 aa16.33■□□□□ 0.2
SNU13-204ENST00000402458 SUPT20HL1Q3ZLR7 823 aa16.33■□□□□ 0.2
SNU13-204ENST00000402458 AMOTL1Q8IY63 956 aa16.33■□□□□ 0.2
SNU13-204ENST00000402458 NACAP1Q9BZK3 213 aa16.33■□□□□ 0.2
SNU13-204ENST00000402458 FAM198AQ9UFP1 575 aa16.33■□□□□ 0.2
SNU13-204ENST00000402458 FLT1P17948 1338 aa16.33■□□□□ 0.2
SNU13-204ENST00000402458 CNTNAP1P78357 1384 aa16.32■□□□□ 0.2
SNU13-204ENST00000402458 CCDC171Q6TFL3 1326 aa16.32■□□□□ 0.2
SNU13-204ENST00000402458 RAD50Q92878 1312 aa16.32■□□□□ 0.2
SNU13-204ENST00000402458 CDCA5Q96FF9 252 aa16.32■□□□□ 0.2
SNU13-204ENST00000402458 RPAP1Q9BWH6 1393 aaPredicted RBP16.32■□□□□ 0.2
SNU13-204ENST00000402458 TMEM39BQ9GZU3 492 aa16.32■□□□□ 0.2
SNU13-204ENST00000402458 OSBPL5Q9H0X9 879 aaPredicted RBP16.32■□□□□ 0.2
SNU13-204ENST00000402458 DHX36Q9H2U1 1008 aaKnown RBP16.32■□□□□ 0.2
SNU13-204ENST00000402458 DDX4Q9NQI0 724 aaKnown RBP16.32■□□□□ 0.2
SNU13-204ENST00000402458 MYH1P12882 1939 aa16.31■□□□□ 0.2
SNU13-204ENST00000402458 NAV1Q8NEY1 1877 aa16.31■□□□□ 0.2
SNU13-204ENST00000402458 PATL2C9JE40 543 aaKnown RBP16.31■□□□□ 0.2
SNU13-204ENST00000402458 GIMAP6Q6P9H5 292 aa16.31■□□□□ 0.2
SNU13-204ENST00000402458 CCDC129Q6ZRS4 1044 aa16.31■□□□□ 0.2
SNU13-204ENST00000402458 SDR42E1Q8WUS8 393 aa16.31■□□□□ 0.2
SNU13-204ENST00000402458 TRAF5O00463 557 aa16.3■□□□□ 0.2
SNU13-204ENST00000402458 PRKAB2O43741 272 aa16.3■□□□□ 0.2
SNU13-204ENST00000402458 ITGBL1O95965 494 aaPredicted RBP16.3■□□□□ 0.2
SNU13-204ENST00000402458 POLR3DP05423 398 aaPredicted RBP16.3■□□□□ 0.2
SNU13-204ENST00000402458 HLA-DOAP06340 250 aa16.3■□□□□ 0.2
SNU13-204ENST00000402458 TDO2P48775 406 aa16.3■□□□□ 0.2
SNU13-204ENST00000402458 PRAMEF18Q5VWM3 479 aa16.3■□□□□ 0.2
SNU13-204ENST00000402458 ZNF408Q9H9D4 720 aa16.3■□□□□ 0.2
SNU13-204ENST00000402458 MCM9Q9NXL9 1143 aa16.3■□□□□ 0.2
SNU13-204ENST00000402458 SAP30BPQ9UHR5 308 aaKnown RBP16.3■□□□□ 0.2
SNU13-204ENST00000402458 TRPM7Q96QT4 1865 aa16.3■□□□□ 0.2
SNU13-204ENST00000402458 COL2A1P02458 1487 aaPredicted RBP16.29■□□□□ 0.2
SNU13-204ENST00000402458 DCAF15Q66K64 600 aa16.29■□□□□ 0.2
SNU13-204ENST00000402458 KIAA1211Q6ZU35 1233 aa16.29■□□□□ 0.2
SNU13-204ENST00000402458 TTC6Q86TZ1 520 aa16.29■□□□□ 0.2
SNU13-204ENST00000402458 ZNF589Q86UQ0 364 aaPredicted RBP16.29■□□□□ 0.2
SNU13-204ENST00000402458 ZFPM1Q8IX07 1006 aa16.29■□□□□ 0.2
SNU13-204ENST00000402458 CSRNP1Q96S65 589 aa16.29■□□□□ 0.2
SNU13-204ENST00000402458 TRIM34Q9BYJ4 488 aa16.29■□□□□ 0.2
SNU13-204ENST00000402458 DCP1AQ9NPI6 582 aaPredicted RBP16.29■□□□□ 0.2
SNU13-204ENST00000402458 BAZ2AQ9UIF9 1905 aaKnown RBP16.28■□□□□ 0.2
SNU13-204ENST00000402458 GSG1L2A8MUP6 293 aa16.28■□□□□ 0.2
SNU13-204ENST00000402458 PPP1R12BO60237 982 aaPredicted RBP16.28■□□□□ 0.2
SNU13-204ENST00000402458 CELF2O95319 508 aaKnown RBP16.28■□□□□ 0.2
SNU13-204ENST00000402458 TTLL12Q14166 644 aaPredicted RBP16.28■□□□□ 0.2
SNU13-204ENST00000402458 NBPF12Q5TAG4 269 aaPredicted RBP16.28■□□□□ 0.2
SNU13-204ENST00000402458 TEPSINQ96N21 525 aa16.28■□□□□ 0.2
SNU13-204ENST00000402458 NAPBQ9H115 298 aa16.28■□□□□ 0.2
SNU13-204ENST00000402458 PI4KBQ9UBF8 816 aa16.28■□□□□ 0.2
SNU13-204ENST00000402458 ARPP21Q9UBL0 812 aaPredicted RBP16.28■□□□□ 0.2
SNU13-204ENST00000402458 PALD1Q9ULE6 856 aa16.28■□□□□ 0.2
SNU13-204ENST00000402458 ATRNL1Q5VV63 1379 aa16.27■□□□□ 0.2
SNU13-204ENST00000402458 DDTLA6NHG4 134 aaPredicted RBP16.27■□□□□ 0.2
SNU13-204ENST00000402458 SGSM2O43147 1006 aa16.27■□□□□ 0.2
SNU13-204ENST00000402458 HSPD1P10809 573 aaKnown RBP16.27■□□□□ 0.2
SNU13-204ENST00000402458 DLK2Q6UY11 383 aa16.27■□□□□ 0.2
SNU13-204ENST00000402458 IFNL3Q8IZI9 196 aa16.27■□□□□ 0.2
SNU13-204ENST00000402458 CRACR2BQ8N4Y2 399 aaPredicted RBP16.27■□□□□ 0.2
SNU13-204ENST00000402458 C2orf69Q8N8R5 385 aa16.27■□□□□ 0.2
SNU13-204ENST00000402458 ESYT1Q9BSJ8 1104 aa16.27■□□□□ 0.2
SNU13-204ENST00000402458 MKRN1Q9UHC7 482 aaKnown RBP16.27■□□□□ 0.2
SNU13-204ENST00000402458 PASKQ96RG2 1323 aa16.26■□□□□ 0.19
SNU13-204ENST00000402458 EIF5BO60841 1220 aaKnown RBP16.26■□□□□ 0.19
SNU13-204ENST00000402458 ARMC9Q7Z3E5 817 aa16.26■□□□□ 0.19
SNU13-204ENST00000402458 USP17L12C9JPN9 530 aa16.25■□□□□ 0.19
SNU13-204ENST00000402458 USP17L21D6R901 530 aa16.25■□□□□ 0.19
SNU13-204ENST00000402458 FKBP1BP68106 108 aa16.25■□□□□ 0.19
SNU13-204ENST00000402458 FMR1Q06787 632 aaKnown RBP eCLIP16.25■□□□□ 0.19
SNU13-204ENST00000402458 ALX1Q15699 326 aa16.25■□□□□ 0.19
SNU13-204ENST00000402458 SLC4A8Q2Y0W8 1093 aa16.25■□□□□ 0.19
SNU13-204ENST00000402458 VPS53Q5VIR6 699 aa16.25■□□□□ 0.19
SNU13-204ENST00000402458 SH3BP5LQ7L8J4 393 aa16.25■□□□□ 0.19
SNU13-204ENST00000402458 FOXP4Q8IVH2 680 aaPredicted RBP16.25■□□□□ 0.19
SNU13-204ENST00000402458 DSCC1Q9BVC3 393 aa16.25■□□□□ 0.19
SNU13-204ENST00000402458 ZNF341Q9BYN7 854 aa16.25■□□□□ 0.19
SNU13-204ENST00000402458 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.25■□□□□ 0.19
SNU13-204ENST00000402458 GBA2Q9HCG7 927 aaPredicted RBP16.25■□□□□ 0.19
SNU13-204ENST00000402458 CTNNA3Q9UI47 895 aa16.25■□□□□ 0.19
SNU13-204ENST00000402458 HERC5Q9UII4 1024 aaKnown RBP16.25■□□□□ 0.19
SNU13-204ENST00000402458 TMEM88BA6NKF7 163 aa16.24■□□□□ 0.19
SNU13-204ENST00000402458 MINDY4BA8MYZ0 360 aa16.24■□□□□ 0.19
SNU13-204ENST00000402458 TBC1D12O60347 775 aa16.24■□□□□ 0.19
SNU13-204ENST00000402458 SLC3A2P08195 630 aaKnown RBP16.24■□□□□ 0.19
SNU13-204ENST00000402458 IREB2P48200 963 aaKnown RBP16.24■□□□□ 0.19
SNU13-204ENST00000402458 PRKG1Q13976 671 aa16.24■□□□□ 0.19
SNU13-204ENST00000402458 SBK1Q52WX2 424 aa16.24■□□□□ 0.19
SNU13-204ENST00000402458 CTR9Q6PD62 1173 aa16.24■□□□□ 0.19
SNU13-204ENST00000402458 MIGA2Q7L4E1 593 aa16.24■□□□□ 0.19
SNU13-204ENST00000402458 CDAN1Q8IWY9 1227 aa16.24■□□□□ 0.19
SNU13-204ENST00000402458 EHD4Q9H223 541 aa16.24■□□□□ 0.19
SNU13-204ENST00000402458 EPB41L4AQ9HCS5 686 aaPredicted RBP16.24■□□□□ 0.19
SNU13-204ENST00000402458 ANO2Q9NQ90 1003 aa16.24■□□□□ 0.19
SNU13-204ENST00000402458 SERPINB13Q9UIV8 391 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms