RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 ST7Q9NRC1 585 aa22.52■■□□□ 1.2
COL13A1-205ENST00000398978 IMPACTQ9P2X3 320 aa22.52■■□□□ 1.2
COL13A1-205ENST00000398978 UBR2Q8IWV8 1755 aa22.52■■□□□ 1.2
COL13A1-205ENST00000398978 A0A0U1RQG5 324 aaPredicted RBP22.52■■□□□ 1.2
COL13A1-205ENST00000398978 SLU7O95391 586 aaKnown RBP22.52■■□□□ 1.2
COL13A1-205ENST00000398978 BMP6P22004 513 aa22.52■■□□□ 1.2
COL13A1-205ENST00000398978 TRMT44Q8IYL2 757 aaKnown RBP22.52■■□□□ 1.2
COL13A1-205ENST00000398978 BPIFA3Q9BQP9 254 aa22.52■■□□□ 1.2
COL13A1-205ENST00000398978 UTP14AQ9BVJ6 771 aaKnown RBP22.52■■□□□ 1.2
COL13A1-205ENST00000398978 PLA2G12BQ9BX93 195 aa22.52■■□□□ 1.2
COL13A1-205ENST00000398978 SEC31BQ9NQW1 1179 aa22.52■■□□□ 1.2
COL13A1-205ENST00000398978 OGFRQ9NZT2 677 aa22.52■■□□□ 1.2
COL13A1-205ENST00000398978 SLC12A7Q9Y666 1083 aa22.52■■□□□ 1.2
COL13A1-205ENST00000398978 CPLX2Q6PUV4 134 aaKnown RBP22.51■■□□□ 1.19
COL13A1-205ENST00000398978 IFNL3Q8IZI9 196 aa22.51■■□□□ 1.19
COL13A1-205ENST00000398978 DNAI1Q9UI46 699 aa22.51■■□□□ 1.19
COL13A1-205ENST00000398978 HPSEQ9Y251 543 aa22.51■■□□□ 1.19
COL13A1-205ENST00000398978 SPEF2Q9C093 1822 aa22.51■■□□□ 1.19
COL13A1-205ENST00000398978 hCG_1642624A0A1W2PR95 340 aa22.51■■□□□ 1.19
COL13A1-205ENST00000398978 NR5A1Q13285 461 aa22.51■■□□□ 1.19
COL13A1-205ENST00000398978 CCDC150Q8NCX0 1101 aa22.51■■□□□ 1.19
COL13A1-205ENST00000398978 NUP133Q8WUM0 1156 aa22.51■■□□□ 1.19
COL13A1-205ENST00000398978 DDX41Q9UJV9 622 aaKnown RBP22.51■■□□□ 1.19
COL13A1-205ENST00000398978 KCNH3Q9ULD8 1083 aa22.51■■□□□ 1.19
COL13A1-205ENST00000398978 C4AP0C0L4 1744 aa22.51■■□□□ 1.19
COL13A1-205ENST00000398978 C4BP0C0L5 1744 aa22.51■■□□□ 1.19
COL13A1-205ENST00000398978 TCRBV5S4A2TA0A5A2 114 aa22.51■■□□□ 1.19
COL13A1-205ENST00000398978 MYH7P12883 1935 aa22.5■■□□□ 1.19
COL13A1-205ENST00000398978 PRR29P0C7W0 189 aa22.5■■□□□ 1.19
COL13A1-205ENST00000398978 RASGRF1Q13972 1273 aa22.5■■□□□ 1.19
COL13A1-205ENST00000398978 FBXO3Q9UK99 471 aa22.5■■□□□ 1.19
COL13A1-205ENST00000398978 SYCP1Q15431 976 aa22.5■■□□□ 1.19
COL13A1-205ENST00000398978 TNS2Q63HR2 1409 aa22.5■■□□□ 1.19
COL13A1-205ENST00000398978 CDKL5O76039 1030 aa22.49■■□□□ 1.19
COL13A1-205ENST00000398978 MYL5Q02045 173 aa22.49■■□□□ 1.19
COL13A1-205ENST00000398978 UBE3CQ15386 1083 aa22.49■■□□□ 1.19
COL13A1-205ENST00000398978 FEZ1Q99689 392 aa22.49■■□□□ 1.19
COL13A1-205ENST00000398978 TUBE1Q9UJT0 475 aa22.49■■□□□ 1.19
COL13A1-205ENST00000398978 SSRP1Q08945 709 aaKnown RBP22.49■■□□□ 1.19
COL13A1-205ENST00000398978 RESP18Q5W5W9 173 aa22.49■■□□□ 1.19
COL13A1-205ENST00000398978 USP49Q70CQ1 688 aa22.49■■□□□ 1.19
COL13A1-205ENST00000398978 TICAM2Q86XR7 235 aa22.49■■□□□ 1.19
COL13A1-205ENST00000398978 ERO1AQ96HE7 468 aa22.49■■□□□ 1.19
COL13A1-205ENST00000398978 FANCGO15287 622 aa22.49■■□□□ 1.19
COL13A1-205ENST00000398978 TOB1P50616 345 aaPredicted RBP22.49■■□□□ 1.19
COL13A1-205ENST00000398978 TTF1Q15361 905 aaPredicted RBP22.49■■□□□ 1.19
COL13A1-205ENST00000398978 LCORLQ8N3X6 602 aa22.49■■□□□ 1.19
COL13A1-205ENST00000398978 SPATA5Q8NB90 893 aa22.49■■□□□ 1.19
COL13A1-205ENST00000398978 BCAMP50895 628 aa22.48■■□□□ 1.19
COL13A1-205ENST00000398978 KRBA2Q6ZNG9 492 aa22.48■■□□□ 1.19
COL13A1-205ENST00000398978 OXER1Q8TDS5 423 aa22.48■■□□□ 1.19
COL13A1-205ENST00000398978 DIS3L2Q8IYB7 885 aaKnown RBP22.48■■□□□ 1.19
COL13A1-205ENST00000398978 JMYQ8N9B5 988 aa22.48■■□□□ 1.19
COL13A1-205ENST00000398978 ZNF397Q8NF99 534 aaPredicted RBP22.48■■□□□ 1.19
COL13A1-205ENST00000398978 POLR2DO15514 142 aaKnown RBP22.47■■□□□ 1.19
COL13A1-205ENST00000398978 PPP6R2O75170 966 aa22.47■■□□□ 1.19
COL13A1-205ENST00000398978 TDO2P48775 406 aa22.47■■□□□ 1.19
COL13A1-205ENST00000398978 OLFM4Q6UX06 510 aa22.47■■□□□ 1.19
COL13A1-205ENST00000398978 INTS13Q9NVM9 706 aa22.47■■□□□ 1.19
COL13A1-205ENST00000398978 PARP4Q9UKK3 1724 aaKnown RBP22.47■■□□□ 1.19
COL13A1-205ENST00000398978 WTIPA6NIX2 430 aaPredicted RBP22.47■■□□□ 1.19
COL13A1-205ENST00000398978 EPC1Q9H2F5 836 aa22.47■■□□□ 1.19
COL13A1-205ENST00000398978 PCDHB6Q9Y5E3 794 aa22.47■■□□□ 1.19
COL13A1-205ENST00000398978 FAM205CA6NFA0 338 aa22.46■■□□□ 1.19
COL13A1-205ENST00000398978 FMR1Q06787 632 aaKnown RBP eCLIP22.46■■□□□ 1.19
COL13A1-205ENST00000398978 SERTAD1Q9UHV2 236 aa22.46■■□□□ 1.19
COL13A1-205ENST00000398978 CASP1P29466 404 aa22.46■■□□□ 1.19
COL13A1-205ENST00000398978 DZIP3Q86Y13 1208 aaKnown RBP22.46■■□□□ 1.19
COL13A1-205ENST00000398978 TMEM87BQ96K49 555 aa22.46■■□□□ 1.19
COL13A1-205ENST00000398978 GSG1L2A8MUP6 293 aa22.46■■□□□ 1.19
COL13A1-205ENST00000398978 PATL2C9JE40 543 aaKnown RBP22.46■■□□□ 1.19
COL13A1-205ENST00000398978 IKBKBO14920 756 aa22.46■■□□□ 1.19
COL13A1-205ENST00000398978 TOP1P11387 765 aaKnown RBP22.46■■□□□ 1.19
COL13A1-205ENST00000398978 ADKP55263 362 aaKnown RBP22.46■■□□□ 1.19
COL13A1-205ENST00000398978 ZNF771Q7L3S4 317 aaPredicted RBP22.46■■□□□ 1.19
COL13A1-205ENST00000398978 ZNF446Q9NWS9 450 aa22.46■■□□□ 1.19
COL13A1-205ENST00000398978 SLC4A4Q9Y6R1 1079 aa22.46■■□□□ 1.19
COL13A1-205ENST00000398978 CYP19A1P11511 503 aaPredicted RBP22.45■■□□□ 1.18
COL13A1-205ENST00000398978 UTP14CQ5TAP6 766 aaKnown RBP22.45■■□□□ 1.18
COL13A1-205ENST00000398978 MFSD6Q6ZSS7 791 aa22.45■■□□□ 1.18
COL13A1-205ENST00000398978 NOSTRINQ8IVI9 506 aa22.45■■□□□ 1.18
COL13A1-205ENST00000398978 WDR19Q8NEZ3 1342 aa22.45■■□□□ 1.18
COL13A1-205ENST00000398978 TOGARAM1Q9Y4F4 1720 aa22.45■■□□□ 1.18
COL13A1-205ENST00000398978 MINDY4BA8MYZ0 360 aa22.45■■□□□ 1.18
COL13A1-205ENST00000398978 PDE8AO60658 829 aa22.45■■□□□ 1.18
COL13A1-205ENST00000398978 PUM3Q15397 648 aaKnown RBP22.45■■□□□ 1.18
COL13A1-205ENST00000398978 SDR42E1Q8WUS8 393 aa22.45■■□□□ 1.18
COL13A1-205ENST00000398978 BTG4Q9NY30 223 aa22.45■■□□□ 1.18
COL13A1-205ENST00000398978 KRI1Q8N9T8 703 aaKnown RBP22.44■■□□□ 1.18
COL13A1-205ENST00000398978 TIGD1Q96MW7 591 aa22.44■■□□□ 1.18
COL13A1-205ENST00000398978 CDHR2Q9BYE9 1310 aa22.44■■□□□ 1.18
COL13A1-205ENST00000398978 COBLO75128 1261 aa22.44■■□□□ 1.18
COL13A1-205ENST00000398978 ARID4AP29374 1257 aaPredicted RBP22.44■■□□□ 1.18
COL13A1-205ENST00000398978 LPIN2Q92539 896 aa22.44■■□□□ 1.18
COL13A1-205ENST00000398978 GTPBP4Q9BZE4 634 aaKnown RBP22.44■■□□□ 1.18
COL13A1-205ENST00000398978 CUTAO60888 179 aa22.44■■□□□ 1.18
COL13A1-205ENST00000398978 URI1O94763 535 aaPredicted RBP22.44■■□□□ 1.18
COL13A1-205ENST00000398978 CDK11BP21127 795 aaKnown RBP22.44■■□□□ 1.18
COL13A1-205ENST00000398978 AKNAD1Q5T1N1 836 aa22.44■■□□□ 1.18
COL13A1-205ENST00000398978 ZBTB9Q96C00 473 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms