RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.06■□□□□ 0.16
PRAME-202ENST00000398743 BECN2A8MW95 431 aa16.06■□□□□ 0.16
PRAME-202ENST00000398743 TOM1O60784 492 aa16.06■□□□□ 0.16
PRAME-202ENST00000398743 SLC39A14Q15043 492 aa16.06■□□□□ 0.16
PRAME-202ENST00000398743 BICDL1Q6ZP65 573 aa16.06■□□□□ 0.16
PRAME-202ENST00000398743 ADGRA1Q86SQ6 560 aa16.06■□□□□ 0.16
PRAME-202ENST00000398743 WASF1Q92558 559 aa16.06■□□□□ 0.16
PRAME-202ENST00000398743 SLC26A6Q9BXS9 759 aa16.06■□□□□ 0.16
PRAME-202ENST00000398743 SPTLC3Q9NUV7 552 aa16.06■□□□□ 0.16
PRAME-202ENST00000398743 MINPP1Q9UNW1 487 aa16.06■□□□□ 0.16
PRAME-202ENST00000398743 MAGEB6P1A0A0J9YX57 407 aa16.05■□□□□ 0.16
PRAME-202ENST00000398743 FMNL1O95466 1100 aaPredicted RBP16.05■□□□□ 0.16
PRAME-202ENST00000398743 IFNAR1P17181 557 aa16.05■□□□□ 0.16
PRAME-202ENST00000398743 PPARAQ07869 468 aa16.05■□□□□ 0.16
PRAME-202ENST00000398743 SARM1Q6SZW1 724 aa16.05■□□□□ 0.16
PRAME-202ENST00000398743 CEP57L1Q8IYX8 460 aa16.05■□□□□ 0.16
PRAME-202ENST00000398743 KIAA1524Q8TCG1 905 aa16.05■□□□□ 0.16
PRAME-202ENST00000398743 NAT10Q9H0A0 1025 aaKnown RBP16.05■□□□□ 0.16
PRAME-202ENST00000398743 PTGS1P23219 599 aa16.04■□□□□ 0.16
PRAME-202ENST00000398743 CMA1P23946 247 aa16.04■□□□□ 0.16
PRAME-202ENST00000398743 U2AF2P26368 475 aaKnown RBP eCLIP16.04■□□□□ 0.163e-26■□□□□ 8.5
PRAME-202ENST00000398743 KCNQ4P56696 695 aa16.04■□□□□ 0.16
PRAME-202ENST00000398743 VPS72Q15906 364 aa16.04■□□□□ 0.16
PRAME-202ENST00000398743 SLC10A5Q5PT55 438 aa16.04■□□□□ 0.16
PRAME-202ENST00000398743 AXDND1Q5T1B0 1012 aaPredicted RBP16.04■□□□□ 0.16
PRAME-202ENST00000398743 TBC1D9BQ66K14 1250 aa16.04■□□□□ 0.16
PRAME-202ENST00000398743 TMTC2Q8N394 836 aa16.04■□□□□ 0.16
PRAME-202ENST00000398743 ZKSCAN3Q9BRR0 538 aa16.04■□□□□ 0.16
PRAME-202ENST00000398743 TAOK2Q9UL54 1235 aa16.04■□□□□ 0.16
PRAME-202ENST00000398743 COL1A1P02452 1464 aaPredicted RBP16.04■□□□□ 0.16
PRAME-202ENST00000398743 SCN7AQ01118 1682 aa16.04■□□□□ 0.16
PRAME-202ENST00000398743 PPP6R2O75170 966 aa16.04■□□□□ 0.16
PRAME-202ENST00000398743 CDC25BP30305 580 aa16.04■□□□□ 0.16
PRAME-202ENST00000398743 ZRSR1Q15695 479 aaKnown RBP16.04■□□□□ 0.16
PRAME-202ENST00000398743 RTN1Q16799 776 aa16.04■□□□□ 0.16
PRAME-202ENST00000398743 C17orf53Q8N3J3 647 aaPredicted RBP16.04■□□□□ 0.16
PRAME-202ENST00000398743 JMYQ8N9B5 988 aa16.04■□□□□ 0.16
PRAME-202ENST00000398743 SDR42E1Q8WUS8 393 aa16.04■□□□□ 0.16
PRAME-202ENST00000398743 CELF1Q92879 486 aaKnown RBP16.04■□□□□ 0.16
PRAME-202ENST00000398743 NYXQ9GZU5 481 aa16.04■□□□□ 0.16
PRAME-202ENST00000398743 KIAA1468Q9P260 1216 aa16.04■□□□□ 0.16
PRAME-202ENST00000398743 CHD4Q14839 1912 aa16.04■□□□□ 0.16
PRAME-202ENST00000398743 ZNF202O95125 648 aa16.03■□□□□ 0.16
PRAME-202ENST00000398743 RCAN1P53805 252 aa16.03■□□□□ 0.16
PRAME-202ENST00000398743 CCDC186Q7Z3E2 898 aa16.03■□□□□ 0.16
PRAME-202ENST00000398743 TRIM22Q8IYM9 498 aa16.03■□□□□ 0.16
PRAME-202ENST00000398743 STK11IPQ8N1F8 1099 aa16.03■□□□□ 0.16
PRAME-202ENST00000398743 ERCC4Q92889 916 aaPredicted RBP16.03■□□□□ 0.16
PRAME-202ENST00000398743 C8orf37Q96NL8 207 aa16.03■□□□□ 0.16
PRAME-202ENST00000398743 BCL2L12Q9HB09 334 aa16.03■□□□□ 0.16
PRAME-202ENST00000398743 CLIP2Q9UDT6 1046 aa16.03■□□□□ 0.16
PRAME-202ENST00000398743 ANAPC4Q9UJX5 808 aa16.03■□□□□ 0.16
PRAME-202ENST00000398743 PYCARDQ9ULZ3 195 aa16.03■□□□□ 0.16
PRAME-202ENST00000398743 CCDC196A0A1B0GTZ2 297 aa16.03■□□□□ 0.16
PRAME-202ENST00000398743 WTIPA6NIX2 430 aaPredicted RBP16.03■□□□□ 0.16
PRAME-202ENST00000398743 MINDY4BA8MYZ0 360 aa16.03■□□□□ 0.16
PRAME-202ENST00000398743 PFKFB1P16118 471 aa16.03■□□□□ 0.16
PRAME-202ENST00000398743 MARCKSP29966 332 aaPredicted RBP16.03■□□□□ 0.16
PRAME-202ENST00000398743 DHX40Q8IX18 779 aaKnown RBP16.03■□□□□ 0.16
PRAME-202ENST00000398743 RIOK1Q9BRS2 568 aaKnown RBP16.03■□□□□ 0.16
PRAME-202ENST00000398743 UBAC1Q9BSL1 405 aa16.03■□□□□ 0.16
PRAME-202ENST00000398743 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.03■□□□□ 0.16
PRAME-202ENST00000398743 NARFQ9UHQ1 456 aa16.03■□□□□ 0.16
PRAME-202ENST00000398743 A0A1B0GUL6 1792 aa16.03■□□□□ 0.16
PRAME-202ENST00000398743 A0A087WWV3 80 aa16.02■□□□□ 0.16
PRAME-202ENST00000398743 UQCRHLA0A096LP55 91 aa16.02■□□□□ 0.16
PRAME-202ENST00000398743 WDHD1O75717 1129 aaPredicted RBP16.02■□□□□ 0.16
PRAME-202ENST00000398743 UQCRHP07919 91 aa16.02■□□□□ 0.16
PRAME-202ENST00000398743 RC3H1Q5TC82 1133 aaKnown RBP16.02■□□□□ 0.16
PRAME-202ENST00000398743 ESR2Q92731 530 aa16.02■□□□□ 0.16
PRAME-202ENST00000398743 NGLY1Q96IV0 654 aa16.02■□□□□ 0.16
PRAME-202ENST00000398743 FAM84BQ96KN1 310 aaPredicted RBP16.02■□□□□ 0.16
PRAME-202ENST00000398743 SLC3A2P08195 630 aaKnown RBP16.02■□□□□ 0.15
PRAME-202ENST00000398743 PTPAQ15257 358 aa16.02■□□□□ 0.15
PRAME-202ENST00000398743 MRFAP1L1Q96HT8 127 aa16.02■□□□□ 0.15
PRAME-202ENST00000398743 NLRP3Q96P20 1036 aa16.02■□□□□ 0.15
PRAME-202ENST00000398743 SETDB2Q96T68 719 aa16.02■□□□□ 0.15
PRAME-202ENST00000398743 MAP3K14Q99558 947 aa16.02■□□□□ 0.15
PRAME-202ENST00000398743 MROH7-TTC4A0A0A0MT08 1334 aa16.01■□□□□ 0.15
PRAME-202ENST00000398743 ECM29Q5VYK3 1845 aa16.01■□□□□ 0.15
PRAME-202ENST00000398743 UBE2Q2LH0YL09 131 aa16.01■□□□□ 0.15
PRAME-202ENST00000398743 SEMA3EO15041 775 aa16.01■□□□□ 0.15
PRAME-202ENST00000398743 RPS6KA4O75676 772 aa16.01■□□□□ 0.15
PRAME-202ENST00000398743 SAFBQ15424 915 aaKnown RBP eCLIP16.01■□□□□ 0.15
PRAME-202ENST00000398743 ZNF654Q8IZM8 581 aa16.01■□□□□ 0.15
PRAME-202ENST00000398743 DEXIO95424 95 aa16■□□□□ 0.15
PRAME-202ENST00000398743 MMP1P03956 469 aa16■□□□□ 0.15
PRAME-202ENST00000398743 RPS8P62241 208 aaKnown RBP16■□□□□ 0.15
PRAME-202ENST00000398743 SMIM5Q71RC9 77 aa16■□□□□ 0.15
PRAME-202ENST00000398743 NBPF5PQ86XG9 351 aaPredicted RBP16■□□□□ 0.15
PRAME-202ENST00000398743 NOSTRINQ8IVI9 506 aa16■□□□□ 0.15
PRAME-202ENST00000398743 AOPEPQ8N6M6 819 aa16■□□□□ 0.15
PRAME-202ENST00000398743 TIGD1Q96MW7 591 aa16■□□□□ 0.15
PRAME-202ENST00000398743 BRIP1Q9BX63 1249 aa16■□□□□ 0.15
PRAME-202ENST00000398743 NRBP1Q9UHY1 535 aa16■□□□□ 0.15
PRAME-202ENST00000398743 ZPR1O75312 459 aa16■□□□□ 0.15
PRAME-202ENST00000398743 GUCY1A2P33402 732 aa16■□□□□ 0.15
PRAME-202ENST00000398743 SYKP43405 635 aa16■□□□□ 0.15
PRAME-202ENST00000398743 PTF1AQ7RTS3 328 aa16■□□□□ 0.15
PRAME-202ENST00000398743 FBXO33Q7Z6M2 555 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms