RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 AFG3L2Q9Y4W6 797 aa20.13■□□□□ 0.81
CUX2-202ENST00000397643 LDHBP07195 334 aaKnown RBP20.12■□□□□ 0.81
CUX2-202ENST00000397643 PTPRAP18433 802 aa20.12■□□□□ 0.81
CUX2-202ENST00000397643 SSH1Q8WYL5 1049 aa20.12■□□□□ 0.81
CUX2-202ENST00000397643 IDI2Q9BXS1 227 aa20.12■□□□□ 0.81
CUX2-202ENST00000397643 ZHX2Q9Y6X8 837 aa20.12■□□□□ 0.81
CUX2-202ENST00000397643 DOCK1Q14185 1865 aa20.11■□□□□ 0.81
CUX2-202ENST00000397643 GAKO14976 1311 aa20.11■□□□□ 0.81
CUX2-202ENST00000397643 ADCY3O60266 1144 aa20.11■□□□□ 0.81
CUX2-202ENST00000397643 SGPL1O95470 568 aa20.11■□□□□ 0.81
CUX2-202ENST00000397643 SLURP2P0DP57 97 aa20.11■□□□□ 0.81
CUX2-202ENST00000397643 FLT3LGP49771 235 aa20.11■□□□□ 0.81
CUX2-202ENST00000397643 RGS3P49796 1198 aa20.11■□□□□ 0.81
CUX2-202ENST00000397643 MAP3K10Q02779 954 aa20.11■□□□□ 0.81
CUX2-202ENST00000397643 ATP2B3Q16720 1220 aa20.11■□□□□ 0.81
CUX2-202ENST00000397643 SLC45A1Q9Y2W3 748 aa20.11■□□□□ 0.81
CUX2-202ENST00000397643 MYH2Q9UKX2 1941 aa20.11■□□□□ 0.81
CUX2-202ENST00000397643 ZBTB22O15209 634 aa20.1■□□□□ 0.81
CUX2-202ENST00000397643 INHAP05111 366 aa20.1■□□□□ 0.81
CUX2-202ENST00000397643 ELNP15502 786 aa20.1■□□□□ 0.81
CUX2-202ENST00000397643 PHKA1P46020 1223 aa20.1■□□□□ 0.81
CUX2-202ENST00000397643 FASTKD5Q7L8L6 764 aaKnown RBP20.1■□□□□ 0.81
CUX2-202ENST00000397643 NR2E3Q9Y5X4 410 aa20.1■□□□□ 0.81
CUX2-202ENST00000397643 COL6A3P12111 3177 aa20.1■□□□□ 0.81
CUX2-202ENST00000397643 ALPK3Q96L96 1907 aa20.1■□□□□ 0.81
CUX2-202ENST00000397643 DOCK3Q8IZD9 2030 aa20.09■□□□□ 0.81
CUX2-202ENST00000397643 ENTPD3O75355 529 aa20.09■□□□□ 0.81
CUX2-202ENST00000397643 CIAO1O76071 339 aa20.09■□□□□ 0.81
CUX2-202ENST00000397643 IRF5Q13568 498 aa20.09■□□□□ 0.81
CUX2-202ENST00000397643 FAM9BQ8IZU0 186 aa20.09■□□□□ 0.81
CUX2-202ENST00000397643 PXYLP1Q8TE99 480 aa20.09■□□□□ 0.81
CUX2-202ENST00000397643 PAK6Q9NQU5 681 aaPredicted RBP20.09■□□□□ 0.81
CUX2-202ENST00000397643 PICK1Q9NRD5 415 aa20.09■□□□□ 0.81
CUX2-202ENST00000397643 DDTLA6NHG4 134 aaPredicted RBP20.08■□□□□ 0.81
CUX2-202ENST00000397643 SEMA3EO15041 775 aa20.08■□□□□ 0.81
CUX2-202ENST00000397643 GADL1Q6ZQY3 521 aa20.08■□□□□ 0.81
CUX2-202ENST00000397643 SIL1Q9H173 461 aa20.08■□□□□ 0.81
CUX2-202ENST00000397643 DDX4Q9NQI0 724 aaKnown RBP20.08■□□□□ 0.81
CUX2-202ENST00000397643 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.08■□□□□ 0.81
CUX2-202ENST00000397643 FBXO3Q9UK99 471 aa20.08■□□□□ 0.81
CUX2-202ENST00000397643 DENND2AQ9ULE3 1009 aa20.08■□□□□ 0.81
CUX2-202ENST00000397643 A0A1W2PPC1 479 aa20.07■□□□□ 0.8
CUX2-202ENST00000397643 SOX1O00570 391 aaPredicted RBP20.07■□□□□ 0.8
CUX2-202ENST00000397643 TNPO2O14787 897 aaKnown RBP20.07■□□□□ 0.8
CUX2-202ENST00000397643 CRISPLD2Q9H0B8 497 aa20.07■□□□□ 0.8
CUX2-202ENST00000397643 GNL3LQ9NVN8 582 aaKnown RBP20.07■□□□□ 0.8
CUX2-202ENST00000397643 ADORA1P30542 326 aa20.06■□□□□ 0.8
CUX2-202ENST00000397643 CCDC84Q86UT8 332 aaPredicted RBP20.06■□□□□ 0.8
CUX2-202ENST00000397643 DEFB118Q96PH6 123 aa20.06■□□□□ 0.8
CUX2-202ENST00000397643 CEP126Q9P2H0 1117 aa20.06■□□□□ 0.8
CUX2-202ENST00000397643 CTNND1O60716 968 aaKnown RBP20.05■□□□□ 0.8
CUX2-202ENST00000397643 RASGRF1Q13972 1273 aa20.05■□□□□ 0.8
CUX2-202ENST00000397643 CCDC102BQ68D86 513 aa20.05■□□□□ 0.8
CUX2-202ENST00000397643 SMCR8Q8TEV9 937 aaPredicted RBP20.05■□□□□ 0.8
CUX2-202ENST00000397643 FAM163AQ96GL9 167 aaPredicted RBP20.05■□□□□ 0.8
CUX2-202ENST00000397643 AGTPBP1Q9UPW5 1226 aa20.05■□□□□ 0.8
CUX2-202ENST00000397643 LOC285556D6RIA3 1793 aa20.05■□□□□ 0.8
CUX2-202ENST00000397643 TRIM75PA6NK02 468 aa20.04■□□□□ 0.8
CUX2-202ENST00000397643 EVI5O60447 810 aa20.04■□□□□ 0.8
CUX2-202ENST00000397643 TREML2Q5T2D2 321 aa20.04■□□□□ 0.8
CUX2-202ENST00000397643 ZSCAN29Q8IWY8 852 aaPredicted RBP20.04■□□□□ 0.8
CUX2-202ENST00000397643 PA2G4Q9UQ80 394 aaKnown RBP20.04■□□□□ 0.8
CUX2-202ENST00000397643 LRRFIP2Q9Y608 721 aaKnown RBP20.04■□□□□ 0.8
CUX2-202ENST00000397643 PDS5AQ29RF7 1337 aaKnown RBP20.03■□□□□ 0.8
CUX2-202ENST00000397643 TFRCP02786 760 aaKnown RBP20.03■□□□□ 0.8
CUX2-202ENST00000397643 CAPN2P17655 700 aa20.03■□□□□ 0.8
CUX2-202ENST00000397643 IL15P40933 162 aaPredicted RBP20.03■□□□□ 0.8
CUX2-202ENST00000397643 BTDP43251 543 aa20.03■□□□□ 0.8
CUX2-202ENST00000397643 ZGPATQ8N5A5 531 aaKnown RBP20.03■□□□□ 0.8
CUX2-202ENST00000397643 ANKRD13CQ8N6S4 541 aa20.03■□□□□ 0.8
CUX2-202ENST00000397643 ZNF384Q8TF68 577 aa20.03■□□□□ 0.8
CUX2-202ENST00000397643 LRCH3Q96II8 777 aa20.03■□□□□ 0.8
CUX2-202ENST00000397643 CUL9Q8IWT3 2517 aa20.02■□□□□ 0.8
CUX2-202ENST00000397643 UBTFL1P0CB47 393 aaPredicted RBP20.02■□□□□ 0.8
CUX2-202ENST00000397643 RHBDL3P58872 404 aa20.02■□□□□ 0.8
CUX2-202ENST00000397643 PICALMQ13492 652 aa20.02■□□□□ 0.8
CUX2-202ENST00000397643 FAM110CQ1W6H9 321 aa20.02■□□□□ 0.8
CUX2-202ENST00000397643 DZIP1Q86YF9 867 aaKnown RBP20.02■□□□□ 0.8
CUX2-202ENST00000397643 DIS3LQ8TF46 1054 aaKnown RBP20.02■□□□□ 0.8
CUX2-202ENST00000397643 PAWRQ96IZ0 340 aaKnown RBP20.02■□□□□ 0.8
CUX2-202ENST00000397643 STAP2Q9UGK3 403 aa20.02■□□□□ 0.8
CUX2-202ENST00000397643 A0A0C4DFX4 3053 aa20.02■□□□□ 0.8
CUX2-202ENST00000397643 MROH7-TTC4A0A0A0MT08 1334 aa20.02■□□□□ 0.79
CUX2-202ENST00000397643 E9PSI1 815 aa20.01■□□□□ 0.79
CUX2-202ENST00000397643 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.01■□□□□ 0.79
CUX2-202ENST00000397643 COPRSQ9NQ92 184 aa20.01■□□□□ 0.79
CUX2-202ENST00000397643 ABCF2Q9UG63 623 aa20.01■□□□□ 0.79
CUX2-202ENST00000397643 FAM196BA6NMK8 535 aa20■□□□□ 0.79
CUX2-202ENST00000397643 TBC1D12O60347 775 aa20■□□□□ 0.79
CUX2-202ENST00000397643 ALDH1L2Q3SY69 923 aa20■□□□□ 0.79
CUX2-202ENST00000397643 COA7Q96BR5 231 aa20■□□□□ 0.79
CUX2-202ENST00000397643 TAOK2Q9UL54 1235 aa20■□□□□ 0.79
CUX2-202ENST00000397643 COL2A1P02458 1487 aaPredicted RBP19.99■□□□□ 0.79
CUX2-202ENST00000397643 GPR75-ASB3A0A0A6YYF3 556 aa19.99■□□□□ 0.79
CUX2-202ENST00000397643 SLFN5Q08AF3 891 aa19.99■□□□□ 0.79
CUX2-202ENST00000397643 PROCA1Q8NCQ7 364 aaPredicted RBP19.99■□□□□ 0.79
CUX2-202ENST00000397643 GDF15Q99988 308 aa19.99■□□□□ 0.79
CUX2-202ENST00000397643 PNMA3Q9UL41 463 aa19.99■□□□□ 0.79
CUX2-202ENST00000397643 PLXNB2O15031 1838 aa19.99■□□□□ 0.79
CUX2-202ENST00000397643 ATAD5Q96QE3 1844 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms