RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 CMTR1Q8N1G2 835 aaKnown RBP27.56■■■□□ 2
PABPN1-202ENST00000397276 NACAP1Q9BZK3 213 aa27.56■■■□□ 2
PABPN1-202ENST00000397276 MYH15Q9Y2K3 1946 aa27.56■■■□□ 2
PABPN1-202ENST00000397276 MINDY4BA8MYZ0 360 aa27.56■■■□□ 2
PABPN1-202ENST00000397276 ANKRD18AQ8IVF6 992 aa27.56■■■□□ 2
PABPN1-202ENST00000397276 COL4A1P02462 1669 aa27.56■■■□□ 2
PABPN1-202ENST00000397276 U2AF2P26368 475 aaKnown RBP eCLIP27.55■■■□□ 24e-24■■□□□ 13.9
PABPN1-202ENST00000397276 NTRK3Q16288 839 aa27.55■■■□□ 2
PABPN1-202ENST00000397276 SMARCC1Q92922 1105 aaPredicted RBP27.55■■■□□ 2
PABPN1-202ENST00000397276 BECN2A8MW95 431 aa27.55■■■□□ 2
PABPN1-202ENST00000397276 IGSF3O75054 1194 aa27.55■■■□□ 2
PABPN1-202ENST00000397276 YEATS4O95619 227 aa27.54■■■□□ 2
PABPN1-202ENST00000397276 PDCL2Q8N4E4 241 aa27.54■■■□□ 2
PABPN1-202ENST00000397276 WNK3Q9BYP7 1800 aa27.54■■■□□ 2
PABPN1-202ENST00000397276 LRMPQ12912 555 aa27.54■■■□□ 2
PABPN1-202ENST00000397276 PLA2G4DQ86XP0 818 aa27.54■■■□□ 2
PABPN1-202ENST00000397276 SGMS1Q86VZ5 419 aa27.54■■■□□ 2
PABPN1-202ENST00000397276 BCL11BQ9C0K0 894 aaPredicted RBP27.54■■■□□ 2
PABPN1-202ENST00000397276 WDHD1O75717 1129 aaPredicted RBP27.53■■■□□ 2
PABPN1-202ENST00000397276 A0A1W2PQ27 194 aa27.53■■■□□ 2
PABPN1-202ENST00000397276 A0A1W2PQ64 194 aa27.53■■■□□ 2
PABPN1-202ENST00000397276 A0A1W2PQD8 194 aa27.53■■■□□ 2
PABPN1-202ENST00000397276 BARGINQ6ZT62 677 aa27.53■■■□□ 2
PABPN1-202ENST00000397276 CELF1Q92879 486 aaKnown RBP27.53■■■□□ 2
PABPN1-202ENST00000397276 KRT23Q9C075 422 aa27.53■■■□□ 2
PABPN1-202ENST00000397276 CNNM2Q9H8M5 875 aa27.53■■■□□ 2
PABPN1-202ENST00000397276 BIN1O00499 593 aa27.52■■■□□ 2
PABPN1-202ENST00000397276 CLIP2Q9UDT6 1046 aa27.52■■■□□ 2
PABPN1-202ENST00000397276 GUCY1A2P33402 732 aa27.52■■■□□ 2
PABPN1-202ENST00000397276 LIFRP42702 1097 aa27.52■■■□□ 2
PABPN1-202ENST00000397276 TRIM29Q14134 588 aa27.52■■■□□ 2
PABPN1-202ENST00000397276 TBC1D9BQ66K14 1250 aa27.52■■■□□ 2
PABPN1-202ENST00000397276 C8orf37Q96NL8 207 aa27.52■■■□□ 2
PABPN1-202ENST00000397276 ANO10Q9NW15 660 aa27.52■■■□□ 2
PABPN1-202ENST00000397276 FAM182BQ5T319 152 aa27.51■■□□□ 1.99
PABPN1-202ENST00000397276 NUP133Q8WUM0 1156 aa27.51■■□□□ 1.99
PABPN1-202ENST00000397276 GNAT2P19087 354 aa27.51■■□□□ 1.99
PABPN1-202ENST00000397276 SSRP1Q08945 709 aaKnown RBP27.51■■□□□ 1.99
PABPN1-202ENST00000397276 DDX60Q8IY21 1712 aaKnown RBP27.5■■□□□ 1.99
PABPN1-202ENST00000397276 ZNF202O95125 648 aa27.5■■□□□ 1.99
PABPN1-202ENST00000397276 WTAPQ15007 396 aa27.5■■□□□ 1.99
PABPN1-202ENST00000397276 ISM2Q6H9L7 571 aa27.5■■□□□ 1.99
PABPN1-202ENST00000397276 CAVIN2O95810 425 aa27.5■■□□□ 1.99
PABPN1-202ENST00000397276 TPM3P06753 285 aa27.5■■□□□ 1.99
PABPN1-202ENST00000397276 AXDND1Q5T1B0 1012 aaPredicted RBP27.5■■□□□ 1.99
PABPN1-202ENST00000397276 CLEC4GQ6UXB4 293 aa27.5■■□□□ 1.99
PABPN1-202ENST00000397276 AOPEPQ8N6M6 819 aa27.5■■□□□ 1.99
PABPN1-202ENST00000397276 SRP68Q9UHB9 627 aaKnown RBP27.5■■□□□ 1.99
PABPN1-202ENST00000397276 MINPP1Q9UNW1 487 aa27.5■■□□□ 1.99
PABPN1-202ENST00000397276 PNPLA7Q6ZV29 1317 aa27.5■■□□□ 1.99
PABPN1-202ENST00000397276 UTP14CQ5TAP6 766 aaKnown RBP27.49■■□□□ 1.99
PABPN1-202ENST00000397276 DHX40Q8IX18 779 aaKnown RBP27.49■■□□□ 1.99
PABPN1-202ENST00000397276 STAG1Q8WVM7 1258 aa27.49■■□□□ 1.99
PABPN1-202ENST00000397276 RTL9Q8NET4 1388 aa27.49■■□□□ 1.99
PABPN1-202ENST00000397276 MAGEB6P1A0A0J9YX57 407 aa27.49■■□□□ 1.99
PABPN1-202ENST00000397276 PFKFB1P16118 471 aa27.49■■□□□ 1.99
PABPN1-202ENST00000397276 DYNLL1P63167 89 aaKnown RBP27.49■■□□□ 1.99
PABPN1-202ENST00000397276 PPARAQ07869 468 aa27.49■■□□□ 1.99
PABPN1-202ENST00000397276 C4AP0C0L4 1744 aa27.49■■□□□ 1.99
PABPN1-202ENST00000397276 C4BP0C0L5 1744 aa27.49■■□□□ 1.99
PABPN1-202ENST00000397276 CYP2D7A0A087X1C5 515 aa27.48■■□□□ 1.99
PABPN1-202ENST00000397276 ERICH2A1L162 156 aa27.48■■□□□ 1.99
PABPN1-202ENST00000397276 SLC39A14Q15043 492 aa27.48■■□□□ 1.99
PABPN1-202ENST00000397276 ZRSR1Q15695 479 aaKnown RBP27.48■■□□□ 1.99
PABPN1-202ENST00000397276 GNL3LQ9NVN8 582 aaKnown RBP27.48■■□□□ 1.99
PABPN1-202ENST00000397276 KCNJ14Q9UNX9 436 aa27.48■■□□□ 1.99
PABPN1-202ENST00000397276 KLRK1P26718 216 aa27.48■■□□□ 1.99
PABPN1-202ENST00000397276 CHAF1AQ13111 956 aaPredicted RBP27.48■■□□□ 1.99
PABPN1-202ENST00000397276 NAA30Q147X3 362 aaPredicted RBP27.48■■□□□ 1.99
PABPN1-202ENST00000397276 SART3Q15020 963 aaKnown RBP27.48■■□□□ 1.99
PABPN1-202ENST00000397276 CAVIN4Q5BKX8 364 aa27.48■■□□□ 1.99
PABPN1-202ENST00000397276 NGLY1Q96IV0 654 aa27.48■■□□□ 1.99
PABPN1-202ENST00000397276 CLIC6Q96NY7 704 aa27.48■■□□□ 1.99
PABPN1-202ENST00000397276 KIAA1468Q9P260 1216 aa27.48■■□□□ 1.99
PABPN1-202ENST00000397276 MROH7-TTC4A0A0A0MT08 1334 aa27.48■■□□□ 1.99
PABPN1-202ENST00000397276 CCDC144BQ3MJ40 725 aa27.48■■□□□ 1.99
PABPN1-202ENST00000397276 CEP57L1Q8IYX8 460 aa27.48■■□□□ 1.99
PABPN1-202ENST00000397276 PHLPP1O60346 1717 aa27.47■■□□□ 1.99
PABPN1-202ENST00000397276 NRAPQ86VF7 1730 aa27.47■■□□□ 1.99
PABPN1-202ENST00000397276 DPCR1Q3MIW9 517 aa27.47■■□□□ 1.99
PABPN1-202ENST00000397276 C16orf45Q96MC5 204 aaPredicted RBP27.47■■□□□ 1.99
PABPN1-202ENST00000397276 BSDC1Q9NW68 430 aaPredicted RBP27.47■■□□□ 1.99
PABPN1-202ENST00000397276 TAF1P21675 1872 aa27.47■■□□□ 1.99
PABPN1-202ENST00000397276 ARAP2Q8WZ64 1704 aa27.46■■□□□ 1.99
PABPN1-202ENST00000397276 RTN1Q16799 776 aa27.46■■□□□ 1.99
PABPN1-202ENST00000397276 ANKRD7Q92527 254 aa27.46■■□□□ 1.99
PABPN1-202ENST00000397276 FAM84BQ96KN1 310 aaPredicted RBP27.46■■□□□ 1.99
PABPN1-202ENST00000397276 BTBD18B2RXH4 712 aa27.46■■□□□ 1.99
PABPN1-202ENST00000397276 SLC3A2P08195 630 aaKnown RBP27.46■■□□□ 1.99
PABPN1-202ENST00000397276 SF3B3Q15393 1217 aaKnown RBP27.46■■□□□ 1.99
PABPN1-202ENST00000397276 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.46■■□□□ 1.99
PABPN1-202ENST00000397276 PRDM1O75626 825 aa27.45■■□□□ 1.99
PABPN1-202ENST00000397276 UBAC1Q9BSL1 405 aa27.45■■□□□ 1.99
PABPN1-202ENST00000397276 TFCP2L1Q9NZI6 479 aa27.45■■□□□ 1.99
PABPN1-202ENST00000397276 CMA1P23946 247 aa27.45■■□□□ 1.98
PABPN1-202ENST00000397276 UBE4AQ14139 1066 aa27.45■■□□□ 1.98
PABPN1-202ENST00000397276 JAG2Q9Y219 1238 aa27.45■■□□□ 1.98
PABPN1-202ENST00000397276 FMNL1O95466 1100 aaPredicted RBP27.44■■□□□ 1.98
PABPN1-202ENST00000397276 ZNF804BA4D1E1 1349 aa27.44■■□□□ 1.98
PABPN1-202ENST00000397276 ARID5BQ14865 1188 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms