RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 VPS53Q5VIR6 699 aa17.69■□□□□ 0.42
CAPN3-207ENST00000397200 CDC42EP5Q6NZY7 148 aa17.69■□□□□ 0.42
CAPN3-207ENST00000397200 SAMD7Q7Z3H4 446 aa17.69■□□□□ 0.42
CAPN3-207ENST00000397200 SCN4AP35499 1836 aa17.68■□□□□ 0.42
CAPN3-207ENST00000397200 FOCADQ5VW36 1801 aa17.68■□□□□ 0.42
CAPN3-207ENST00000397200 PATL2C9JE40 543 aaKnown RBP17.68■□□□□ 0.42
CAPN3-207ENST00000397200 PRKAB2O43741 272 aa17.68■□□□□ 0.42
CAPN3-207ENST00000397200 MYO1BO43795 1136 aa17.68■□□□□ 0.42
CAPN3-207ENST00000397200 SDR42E1Q8WUS8 393 aa17.68■□□□□ 0.42
CAPN3-207ENST00000397200 ZBED3Q96IU2 234 aaPredicted RBP17.68■□□□□ 0.42
CAPN3-207ENST00000397200 DSCC1Q9BVC3 393 aa17.68■□□□□ 0.42
CAPN3-207ENST00000397200 WDR90Q96KV7 1748 aa17.68■□□□□ 0.42
CAPN3-207ENST00000397200 LAMA4Q16363 1823 aa17.67■□□□□ 0.42
CAPN3-207ENST00000397200 WNT10BO00744 389 aa17.67■□□□□ 0.42
CAPN3-207ENST00000397200 USP5P45974 858 aa17.67■□□□□ 0.42
CAPN3-207ENST00000397200 UPF3BQ9BZI7 483 aaKnown RBP17.67■□□□□ 0.42
CAPN3-207ENST00000397200 NACAP1Q9BZK3 213 aa17.67■□□□□ 0.42
CAPN3-207ENST00000397200 TDRD3Q9H7E2 651 aaKnown RBP17.67■□□□□ 0.42
CAPN3-207ENST00000397200 ADARB2Q9NS39 739 aaKnown RBP17.67■□□□□ 0.42
CAPN3-207ENST00000397200 TMOD2Q9NZR1 351 aa17.67■□□□□ 0.42
CAPN3-207ENST00000397200 HACL1Q9UJ83 578 aa17.67■□□□□ 0.42
CAPN3-207ENST00000397200 NAV1Q8NEY1 1877 aa17.67■□□□□ 0.42
CAPN3-207ENST00000397200 IQCA1LA6NCM1 817 aa17.66■□□□□ 0.42
CAPN3-207ENST00000397200 GSG1L2A8MUP6 293 aa17.66■□□□□ 0.42
CAPN3-207ENST00000397200 EGFRP00533 1210 aa17.66■□□□□ 0.42
CAPN3-207ENST00000397200 NBPF9Q3BBW0 867 aa17.66■□□□□ 0.42
CAPN3-207ENST00000397200 TGFBRAP1Q8WUH2 860 aa17.66■□□□□ 0.42
CAPN3-207ENST00000397200 ATP8A2Q9NTI2 1148 aa17.66■□□□□ 0.42
CAPN3-207ENST00000397200 BAZ2AQ9UIF9 1905 aaKnown RBP17.66■□□□□ 0.42
CAPN3-207ENST00000397200 FOXP2O15409 715 aa17.65■□□□□ 0.42
CAPN3-207ENST00000397200 SPDYE2Q495Y8 402 aa17.65■□□□□ 0.42
CAPN3-207ENST00000397200 IFNL3Q8IZI9 196 aa17.65■□□□□ 0.42
CAPN3-207ENST00000397200 TRPM4Q8TD43 1214 aa17.65■□□□□ 0.42
CAPN3-207ENST00000397200 ZNF70Q9UC06 446 aaPredicted RBP17.65■□□□□ 0.42
CAPN3-207ENST00000397200 RBM8AQ9Y5S9 174 aaKnown RBP17.65■□□□□ 0.42
CAPN3-207ENST00000397200 U3KPZ7 1027 aaPredicted RBP17.65■□□□□ 0.42
CAPN3-207ENST00000397200 CLRN2A0PK11 232 aa17.65■□□□□ 0.42
CAPN3-207ENST00000397200 WDHD1O75717 1129 aaPredicted RBP17.65■□□□□ 0.42
CAPN3-207ENST00000397200 TDO2P48775 406 aa17.65■□□□□ 0.42
CAPN3-207ENST00000397200 PICALMQ13492 652 aa17.65■□□□□ 0.42
CAPN3-207ENST00000397200 GIMAP6Q6P9H5 292 aa17.65■□□□□ 0.42
CAPN3-207ENST00000397200 MAPKAPK5Q8IW41 473 aa17.65■□□□□ 0.42
CAPN3-207ENST00000397200 NAPBQ9H115 298 aa17.65■□□□□ 0.42
CAPN3-207ENST00000397200 ZSWIM6Q9HCJ5 1215 aa17.65■□□□□ 0.42
CAPN3-207ENST00000397200 EPB41L4AQ9HCS5 686 aaPredicted RBP17.65■□□□□ 0.42
CAPN3-207ENST00000397200 DCP1AQ9NPI6 582 aaPredicted RBP17.65■□□□□ 0.42
CAPN3-207ENST00000397200 MYH1P12882 1939 aa17.64■□□□□ 0.41
CAPN3-207ENST00000397200 TRAK2O60296 914 aa17.64■□□□□ 0.41
CAPN3-207ENST00000397200 BAG4O95429 457 aaKnown RBP17.64■□□□□ 0.41
CAPN3-207ENST00000397200 CACNB3P54284 484 aa17.64■□□□□ 0.41
CAPN3-207ENST00000397200 ALX1Q15699 326 aa17.64■□□□□ 0.41
CAPN3-207ENST00000397200 TSGA10IPQ3SY00 556 aa17.64■□□□□ 0.41
CAPN3-207ENST00000397200 CREB3L3Q68CJ9 461 aa17.64■□□□□ 0.41
CAPN3-207ENST00000397200 IDI2Q9BXS1 227 aa17.64■□□□□ 0.41
CAPN3-207ENST00000397200 VEZTQ9HBM0 779 aa17.64■□□□□ 0.41
CAPN3-207ENST00000397200 CTNNA3Q9UI47 895 aa17.64■□□□□ 0.41
CAPN3-207ENST00000397200 ZMYM6O95789 1325 aa17.64■□□□□ 0.41
CAPN3-207ENST00000397200 FLT1P17948 1338 aa17.64■□□□□ 0.41
CAPN3-207ENST00000397200 FGAP02671 866 aa17.63■□□□□ 0.41
CAPN3-207ENST00000397200 EPHX2P34913 555 aa17.63■□□□□ 0.41
CAPN3-207ENST00000397200 ZDHHC9Q9Y397 364 aa17.63■□□□□ 0.41
CAPN3-207ENST00000397200 SLC27A2O14975 620 aa17.62■□□□□ 0.41
CAPN3-207ENST00000397200 NFIAQ12857 509 aa17.62■□□□□ 0.41
CAPN3-207ENST00000397200 PKP1Q13835 747 aa17.62■□□□□ 0.41
CAPN3-207ENST00000397200 USP50Q70EL3 339 aaPredicted RBP17.62■□□□□ 0.41
CAPN3-207ENST00000397200 DDX4Q9NQI0 724 aaKnown RBP17.62■□□□□ 0.41
CAPN3-207ENST00000397200 DDX60LQ5H9U9 1706 aaKnown RBP17.62■□□□□ 0.41
CAPN3-207ENST00000397200 LAMB1P07942 1786 aa17.62■□□□□ 0.41
CAPN3-207ENST00000397200 NPM3O75607 178 aaKnown RBP17.61■□□□□ 0.41
CAPN3-207ENST00000397200 HIRAP54198 1017 aaPredicted RBP17.61■□□□□ 0.41
CAPN3-207ENST00000397200 AK2P54819 239 aa17.61■□□□□ 0.41
CAPN3-207ENST00000397200 ADCK5Q3MIX3 580 aa17.61■□□□□ 0.41
CAPN3-207ENST00000397200 TAF1DQ9H5J8 278 aaPredicted RBP17.61■□□□□ 0.41
CAPN3-207ENST00000397200 MCM9Q9NXL9 1143 aa17.61■□□□□ 0.41
CAPN3-207ENST00000397200 MKRN1Q9UHC7 482 aaKnown RBP17.61■□□□□ 0.41
CAPN3-207ENST00000397200 POTECB2RU33 542 aa17.61■□□□□ 0.41
CAPN3-207ENST00000397200 TCP10L2B9ZVM9 353 aa17.61■□□□□ 0.41
CAPN3-207ENST00000397200 ZKSCAN1P17029 563 aaPredicted RBP17.61■□□□□ 0.41
CAPN3-207ENST00000397200 CASTP20810 708 aaKnown RBP17.61■□□□□ 0.41
CAPN3-207ENST00000397200 SKOR2Q2VWA4 1001 aaPredicted RBP17.61■□□□□ 0.41
CAPN3-207ENST00000397200 FKBP1CQ5VVH2 108 aa17.61■□□□□ 0.41
CAPN3-207ENST00000397200 RUFY3Q7L099 469 aa17.61■□□□□ 0.41
CAPN3-207ENST00000397200 AMOTL1Q8IY63 956 aa17.61■□□□□ 0.41
CAPN3-207ENST00000397200 OSBPL5Q9H0X9 879 aaPredicted RBP17.61■□□□□ 0.41
CAPN3-207ENST00000397200 ALDH8A1Q9H2A2 487 aaPredicted RBP17.61■□□□□ 0.41
CAPN3-207ENST00000397200 ARPP21Q9UBL0 812 aaPredicted RBP17.61■□□□□ 0.41
CAPN3-207ENST00000397200 FAM198AQ9UFP1 575 aa17.61■□□□□ 0.41
CAPN3-207ENST00000397200 SAP30BPQ9UHR5 308 aaKnown RBP17.61■□□□□ 0.41
CAPN3-207ENST00000397200 LIMCH1Q9UPQ0 1083 aa17.61■□□□□ 0.41
CAPN3-207ENST00000397200 ASTN2O75129 1339 aaPredicted RBP17.6■□□□□ 0.41
CAPN3-207ENST00000397200 USP17L12C9JPN9 530 aa17.6■□□□□ 0.41
CAPN3-207ENST00000397200 USP17L21D6R901 530 aa17.6■□□□□ 0.41
CAPN3-207ENST00000397200 ENTPD3O75355 529 aa17.6■□□□□ 0.41
CAPN3-207ENST00000397200 BRD1O95696 1058 aa17.6■□□□□ 0.41
CAPN3-207ENST00000397200 TNNI2P48788 182 aa17.6■□□□□ 0.41
CAPN3-207ENST00000397200 TCP10Q12799 353 aa17.6■□□□□ 0.41
CAPN3-207ENST00000397200 TNFAIP1Q13829 316 aa17.6■□□□□ 0.41
CAPN3-207ENST00000397200 IMMTQ16891 758 aaKnown RBP17.6■□□□□ 0.41
CAPN3-207ENST00000397200 ANGEL2Q5VTE6 544 aaKnown RBP17.6■□□□□ 0.41
CAPN3-207ENST00000397200 RNF20Q5VTR2 975 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms