RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 AK2P54819 239 aa16.1■□□□□ 0.17
MCF2L-209ENST00000397036 CUL4AQ13619 759 aa16.1■□□□□ 0.17
MCF2L-209ENST00000397036 C12orf60Q5U649 245 aa16.1■□□□□ 0.17
MCF2L-209ENST00000397036 MFSD6Q6ZSS7 791 aa16.1■□□□□ 0.17
MCF2L-209ENST00000397036 RALYLQ86SE5 291 aaKnown RBP16.1■□□□□ 0.17
MCF2L-209ENST00000397036 TBC1D10CQ8IV04 446 aa16.1■□□□□ 0.17
MCF2L-209ENST00000397036 HDAC9Q9UKV0 1011 aa16.1■□□□□ 0.17
MCF2L-209ENST00000397036 PSME4Q14997 1843 aa16.1■□□□□ 0.17
MCF2L-209ENST00000397036 SLC3A2P08195 630 aaKnown RBP16.09■□□□□ 0.17
MCF2L-209ENST00000397036 CPA1P15085 419 aa16.09■□□□□ 0.17
MCF2L-209ENST00000397036 SCNN1DP51172 638 aa16.09■□□□□ 0.17
MCF2L-209ENST00000397036 TGFBRAP1Q8WUH2 860 aa16.09■□□□□ 0.17
MCF2L-209ENST00000397036 INTS4Q96HW7 963 aaKnown RBP16.09■□□□□ 0.17
MCF2L-209ENST00000397036 TMX3Q96JJ7 454 aa16.09■□□□□ 0.17
MCF2L-209ENST00000397036 SH2B1Q9NRF2 756 aaPredicted RBP16.09■□□□□ 0.17
MCF2L-209ENST00000397036 ZNF646O15015 1829 aaPredicted RBP16.09■□□□□ 0.17
MCF2L-209ENST00000397036 ORC4O43929 436 aa16.09■□□□□ 0.17
MCF2L-209ENST00000397036 WDHD1O75717 1129 aaPredicted RBP16.09■□□□□ 0.17
MCF2L-209ENST00000397036 LMNB1P20700 586 aa16.09■□□□□ 0.17
MCF2L-209ENST00000397036 SLC4A3P48751 1232 aa16.09■□□□□ 0.17
MCF2L-209ENST00000397036 EVCP57679 992 aa16.09■□□□□ 0.17
MCF2L-209ENST00000397036 CDC42EP5Q6NZY7 148 aa16.09■□□□□ 0.17
MCF2L-209ENST00000397036 AMOTL1Q8IY63 956 aa16.09■□□□□ 0.17
MCF2L-209ENST00000397036 OGFOD1Q8N543 542 aa16.09■□□□□ 0.17
MCF2L-209ENST00000397036 DPF2Q92785 391 aa16.09■□□□□ 0.17
MCF2L-209ENST00000397036 IDI2Q9BXS1 227 aa16.09■□□□□ 0.17
MCF2L-209ENST00000397036 USP40Q9NVE5 1235 aa16.09■□□□□ 0.17
MCF2L-209ENST00000397036 MCM9Q9NXL9 1143 aa16.09■□□□□ 0.17
MCF2L-209ENST00000397036 MINDY4BA8MYZ0 360 aa16.08■□□□□ 0.16
MCF2L-209ENST00000397036 USP17L8P0C7I0 530 aa16.08■□□□□ 0.16
MCF2L-209ENST00000397036 PRELPP51888 382 aa16.08■□□□□ 0.16
MCF2L-209ENST00000397036 EIF6P56537 245 aaKnown RBP16.08■□□□□ 0.16
MCF2L-209ENST00000397036 COL9A3Q14050 684 aaPredicted RBP16.08■□□□□ 0.16
MCF2L-209ENST00000397036 TOB2Q14106 344 aaPredicted RBP16.08■□□□□ 0.16
MCF2L-209ENST00000397036 ARHGAP27Q6ZUM4 889 aa16.08■□□□□ 0.16
MCF2L-209ENST00000397036 TMEM87BQ96K49 555 aa16.08■□□□□ 0.16
MCF2L-209ENST00000397036 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.08■□□□□ 0.16
MCF2L-209ENST00000397036 ROBO3Q96MS0 1386 aa16.07■□□□□ 0.16
MCF2L-209ENST00000397036 RASSF7Q02833 373 aa16.07■□□□□ 0.16
MCF2L-209ENST00000397036 CTDSPL2Q05D32 466 aa16.07■□□□□ 0.16
MCF2L-209ENST00000397036 CFAP100Q494V2 611 aa16.07■□□□□ 0.16
MCF2L-209ENST00000397036 FLT1P17948 1338 aa16.07■□□□□ 0.16
MCF2L-209ENST00000397036 ZNF280AP59817 542 aaPredicted RBP16.06■□□□□ 0.16
MCF2L-209ENST00000397036 PDE4BQ07343 736 aa16.06■□□□□ 0.16
MCF2L-209ENST00000397036 FKBP1CQ5VVH2 108 aa16.06■□□□□ 0.16
MCF2L-209ENST00000397036 Q6ZUG5 572 aa16.06■□□□□ 0.16
MCF2L-209ENST00000397036 TIAM2Q8IVF5 1701 aa16.06■□□□□ 0.16
MCF2L-209ENST00000397036 ESR2Q92731 530 aa16.06■□□□□ 0.16
MCF2L-209ENST00000397036 CHMP4CQ96CF2 233 aa16.06■□□□□ 0.16
MCF2L-209ENST00000397036 ZBED3Q96IU2 234 aaPredicted RBP16.06■□□□□ 0.16
MCF2L-209ENST00000397036 ZNF287Q9HBT7 754 aa16.06■□□□□ 0.16
MCF2L-209ENST00000397036 CWC22Q9HCG8 908 aaKnown RBP16.06■□□□□ 0.16
MCF2L-209ENST00000397036 TACC3Q9Y6A5 838 aa16.06■□□□□ 0.16
MCF2L-209ENST00000397036 LAMA4Q16363 1823 aa16.06■□□□□ 0.16
MCF2L-209ENST00000397036 SPDYE2BA6NHP3 402 aa16.05■□□□□ 0.16
MCF2L-209ENST00000397036 SOCS7O14512 581 aa16.05■□□□□ 0.16
MCF2L-209ENST00000397036 PRC1O43663 620 aa16.05■□□□□ 0.16
MCF2L-209ENST00000397036 SPDYE6P0CI01 402 aa16.05■□□□□ 0.16
MCF2L-209ENST00000397036 ANTXR2P58335 489 aa16.05■□□□□ 0.16
MCF2L-209ENST00000397036 TTC6Q86TZ1 520 aa16.05■□□□□ 0.16
MCF2L-209ENST00000397036 MAPKAPK5Q8IW41 473 aa16.05■□□□□ 0.16
MCF2L-209ENST00000397036 ZNF274Q96GC6 653 aaPredicted RBP16.05■□□□□ 0.16
MCF2L-209ENST00000397036 ZSWIM5Q9P217 1185 aa16.05■□□□□ 0.16
MCF2L-209ENST00000397036 NEDD4P46934 1319 aa16.05■□□□□ 0.16
MCF2L-209ENST00000397036 B4E1Z4 1266 aa16.04■□□□□ 0.16
MCF2L-209ENST00000397036 ENTPD3O75355 529 aa16.04■□□□□ 0.16
MCF2L-209ENST00000397036 POLR3DP05423 398 aaPredicted RBP16.04■□□□□ 0.16
MCF2L-209ENST00000397036 DDIT3P35638 169 aa16.04■□□□□ 0.16
MCF2L-209ENST00000397036 LIFRP42702 1097 aa16.04■□□□□ 0.16
MCF2L-209ENST00000397036 DLGAP5Q15398 846 aa16.04■□□□□ 0.16
MCF2L-209ENST00000397036 TMTC2Q8N394 836 aa16.04■□□□□ 0.16
MCF2L-209ENST00000397036 IGDCC4Q8TDY8 1250 aa16.04■□□□□ 0.16
MCF2L-209ENST00000397036 PRMT6Q96LA8 375 aaPredicted RBP16.04■□□□□ 0.16
MCF2L-209ENST00000397036 DHX36Q9H2U1 1008 aaKnown RBP16.04■□□□□ 0.16
MCF2L-209ENST00000397036 TPCN1Q9ULQ1 816 aa16.04■□□□□ 0.16
MCF2L-209ENST00000397036 ZBTB12Q9Y330 459 aaPredicted RBP16.04■□□□□ 0.16
MCF2L-209ENST00000397036 RBM5P52756 815 aaKnown RBP eCLIP16.04■□□□□ 0.16
MCF2L-209ENST00000397036 FGD1P98174 961 aa16.04■□□□□ 0.16
MCF2L-209ENST00000397036 OSBPL5Q9H0X9 879 aaPredicted RBP16.04■□□□□ 0.16
MCF2L-209ENST00000397036 CIZ1Q9ULV3 898 aaPredicted RBP16.04■□□□□ 0.16
MCF2L-209ENST00000397036 ANGEL1Q9UNK9 670 aaKnown RBP16.04■□□□□ 0.16
MCF2L-209ENST00000397036 CYP2D7A0A087X1C5 515 aa16.03■□□□□ 0.16
MCF2L-209ENST00000397036 KDM4AO75164 1064 aa16.03■□□□□ 0.16
MCF2L-209ENST00000397036 HSP90AA1P07900 732 aaKnown RBP16.03■□□□□ 0.16
MCF2L-209ENST00000397036 SART3Q15020 963 aaKnown RBP16.03■□□□□ 0.16
MCF2L-209ENST00000397036 C16orf86Q6ZW13 317 aa16.03■□□□□ 0.16
MCF2L-209ENST00000397036 CYB5R4Q7L1T6 521 aa16.03■□□□□ 0.16
MCF2L-209ENST00000397036 SGMS1Q86VZ5 419 aa16.03■□□□□ 0.16
MCF2L-209ENST00000397036 BRF1Q92994 677 aa16.03■□□□□ 0.16
MCF2L-209ENST00000397036 TCEANC2Q96MN5 208 aa16.03■□□□□ 0.16
MCF2L-209ENST00000397036 EHD4Q9H223 541 aa16.03■□□□□ 0.16
MCF2L-209ENST00000397036 DDX4Q9NQI0 724 aaKnown RBP16.03■□□□□ 0.16
MCF2L-209ENST00000397036 SH2B2O14492 632 aaPredicted RBP16.02■□□□□ 0.15
MCF2L-209ENST00000397036 CYP2D6P10635 497 aa16.02■□□□□ 0.15
MCF2L-209ENST00000397036 YBX3P16989 372 aaKnown RBP eCLIP16.02■□□□□ 0.15
MCF2L-209ENST00000397036 PLCD1P51178 756 aa16.02■□□□□ 0.15
MCF2L-209ENST00000397036 GABPAQ06546 454 aa16.02■□□□□ 0.15
MCF2L-209ENST00000397036 ME3Q16798 604 aa16.02■□□□□ 0.15
MCF2L-209ENST00000397036 CCDC178Q5BJE1 867 aa16.02■□□□□ 0.15
MCF2L-209ENST00000397036 GPC2Q8N158 579 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms