RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 ANKLE1Q8NAG6 615 aa10.63□□□□□ -0.71
SCFD1-202ENST00000396629 SRCIN1Q9C0H9 1055 aa10.63□□□□□ -0.71
SCFD1-202ENST00000396629 FAM198AQ9UFP1 575 aa10.63□□□□□ -0.71
SCFD1-202ENST00000396629 DAGLAQ9Y4D2 1042 aa10.63□□□□□ -0.71
SCFD1-202ENST00000396629 ATRNL1Q5VV63 1379 aa10.63□□□□□ -0.71
SCFD1-202ENST00000396629 TNPO2O14787 897 aaKnown RBP10.62□□□□□ -0.71
SCFD1-202ENST00000396629 FGFR2P21802 821 aa10.62□□□□□ -0.71
SCFD1-202ENST00000396629 NFIAQ12857 509 aa10.62□□□□□ -0.71
SCFD1-202ENST00000396629 LRIT3Q3SXY7 679 aa10.62□□□□□ -0.71
SCFD1-202ENST00000396629 WDR66Q8TBY9 1149 aa10.62□□□□□ -0.71
SCFD1-202ENST00000396629 AFG3L2Q9Y4W6 797 aa10.62□□□□□ -0.71
SCFD1-202ENST00000396629 DDX60LQ5H9U9 1706 aaKnown RBP10.62□□□□□ -0.71
SCFD1-202ENST00000396629 SCYL3Q8IZE3 742 aa10.62□□□□□ -0.71
SCFD1-202ENST00000396629 DIS3LQ8TF46 1054 aaKnown RBP10.62□□□□□ -0.71
SCFD1-202ENST00000396629 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.62□□□□□ -0.71
SCFD1-202ENST00000396629 MTMR10Q9NXD2 777 aa10.62□□□□□ -0.71
SCFD1-202ENST00000396629 ZHX2Q9Y6X8 837 aa10.62□□□□□ -0.71
SCFD1-202ENST00000396629 MYH2Q9UKX2 1941 aa10.61□□□□□ -0.71
SCFD1-202ENST00000396629 NBPF7P0C2Y1 421 aaPredicted RBP10.61□□□□□ -0.71
SCFD1-202ENST00000396629 PTPRAP18433 802 aa10.61□□□□□ -0.71
SCFD1-202ENST00000396629 CACNB1Q02641 598 aaPredicted RBP10.61□□□□□ -0.71
SCFD1-202ENST00000396629 MAP3K10Q02779 954 aa10.61□□□□□ -0.71
SCFD1-202ENST00000396629 GADL1Q6ZQY3 521 aa10.61□□□□□ -0.71
SCFD1-202ENST00000396629 WDR63Q8IWG1 891 aa10.61□□□□□ -0.71
SCFD1-202ENST00000396629 ZFPM1Q8IX07 1006 aa10.61□□□□□ -0.71
SCFD1-202ENST00000396629 C7orf61Q8IZ16 206 aa10.61□□□□□ -0.71
SCFD1-202ENST00000396629 ANKRD44Q8N8A2 993 aa10.61□□□□□ -0.71
SCFD1-202ENST00000396629 BICC1Q9H694 974 aaKnown RBP10.61□□□□□ -0.71
SCFD1-202ENST00000396629 PLXNB2O15031 1838 aa10.61□□□□□ -0.71
SCFD1-202ENST00000396629 CUL9Q8IWT3 2517 aa10.6□□□□□ -0.71
SCFD1-202ENST00000396629 IFIT1P09914 478 aaKnown RBP10.6□□□□□ -0.71
SCFD1-202ENST00000396629 Q7L0L9 218 aa10.6□□□□□ -0.71
SCFD1-202ENST00000396629 COA7Q96BR5 231 aa10.6□□□□□ -0.71
SCFD1-202ENST00000396629 USP40Q9NVE5 1235 aa10.6□□□□□ -0.71
SCFD1-202ENST00000396629 ZMYND8Q9ULU4 1186 aaPredicted RBP10.6□□□□□ -0.71
SCFD1-202ENST00000396629 A0A0C4DFX4 3053 aa10.6□□□□□ -0.71
SCFD1-202ENST00000396629 LOC285556D6RIA3 1793 aa10.6□□□□□ -0.71
SCFD1-202ENST00000396629 PUM3Q15397 648 aaKnown RBP10.6□□□□□ -0.71
SCFD1-202ENST00000396629 DIXDC1Q155Q3 683 aa10.6□□□□□ -0.71
SCFD1-202ENST00000396629 SLC4A10Q6U841 1118 aa10.6□□□□□ -0.71
SCFD1-202ENST00000396629 PICK1Q9NRD5 415 aa10.6□□□□□ -0.71
SCFD1-202ENST00000396629 ENTPD3O75355 529 aa10.59□□□□□ -0.71
SCFD1-202ENST00000396629 MAGEA10P43363 369 aaPredicted RBP10.59□□□□□ -0.71
SCFD1-202ENST00000396629 TDHQ8IZJ6 230 aa10.59□□□□□ -0.71
SCFD1-202ENST00000396629 IDI2Q9BXS1 227 aa10.59□□□□□ -0.71
SCFD1-202ENST00000396629 NBPF3Q9H094 633 aa10.59□□□□□ -0.71
SCFD1-202ENST00000396629 RFX7Q2KHR2 1363 aa10.59□□□□□ -0.71
SCFD1-202ENST00000396629 PRDX5P30044 214 aa10.58□□□□□ -0.72
SCFD1-202ENST00000396629 FAM110CQ1W6H9 321 aa10.58□□□□□ -0.72
SCFD1-202ENST00000396629 CCDC184Q52MB2 194 aa10.58□□□□□ -0.72
SCFD1-202ENST00000396629 SH3BP5LQ7L8J4 393 aa10.58□□□□□ -0.72
SCFD1-202ENST00000396629 ANKRD13CQ8N6S4 541 aa10.58□□□□□ -0.72
SCFD1-202ENST00000396629 KLHDC4Q8TBB5 520 aa10.58□□□□□ -0.72
SCFD1-202ENST00000396629 SMCR8Q8TEV9 937 aaPredicted RBP10.58□□□□□ -0.72
SCFD1-202ENST00000396629 COL25A1Q9BXS0 654 aaPredicted RBP10.58□□□□□ -0.72
SCFD1-202ENST00000396629 AGTPBP1Q9UPW5 1226 aa10.58□□□□□ -0.72
SCFD1-202ENST00000396629 LAMA3Q16787 3333 aa10.58□□□□□ -0.72
SCFD1-202ENST00000396629 ATAD5Q96QE3 1844 aa10.58□□□□□ -0.72
SCFD1-202ENST00000396629 RPTORQ8N122 1335 aa10.58□□□□□ -0.72
SCFD1-202ENST00000396629 SALL1Q9NSC2 1324 aa10.58□□□□□ -0.72
SCFD1-202ENST00000396629 CTNND1O60716 968 aaKnown RBP10.58□□□□□ -0.72
SCFD1-202ENST00000396629 HMGCRP04035 888 aa10.58□□□□□ -0.72
SCFD1-202ENST00000396629 SLC5A1P13866 664 aa10.58□□□□□ -0.72
SCFD1-202ENST00000396629 LPIN2Q92539 896 aa10.58□□□□□ -0.72
SCFD1-202ENST00000396629 C11orf49Q9H6J7 331 aa10.58□□□□□ -0.72
SCFD1-202ENST00000396629 GJD2Q9UKL4 321 aa10.58□□□□□ -0.72
SCFD1-202ENST00000396629 TAOK2Q9UL54 1235 aa10.58□□□□□ -0.72
SCFD1-202ENST00000396629 LDHBP07195 334 aaKnown RBP10.57□□□□□ -0.72
SCFD1-202ENST00000396629 SYN1P17600 705 aa10.57□□□□□ -0.72
SCFD1-202ENST00000396629 ZEB1P37275 1124 aaPredicted RBP10.57□□□□□ -0.72
SCFD1-202ENST00000396629 RGS3P49796 1198 aa10.57□□□□□ -0.72
SCFD1-202ENST00000396629 HMX1Q9NP08 348 aaPredicted RBP10.57□□□□□ -0.72
SCFD1-202ENST00000396629 OGDHLQ9ULD0 1010 aa10.57□□□□□ -0.72
SCFD1-202ENST00000396629 LRRFIP2Q9Y608 721 aaKnown RBP10.57□□□□□ -0.72
SCFD1-202ENST00000396629 RFX5P48382 616 aaPredicted RBP10.57□□□□□ -0.72
SCFD1-202ENST00000396629 TREML2Q5T2D2 321 aa10.57□□□□□ -0.72
SCFD1-202ENST00000396629 PROCA1Q8NCQ7 364 aaPredicted RBP10.57□□□□□ -0.72
SCFD1-202ENST00000396629 PNMA3Q9UL41 463 aa10.57□□□□□ -0.72
SCFD1-202ENST00000396629 GAKO14976 1311 aa10.56□□□□□ -0.72
SCFD1-202ENST00000396629 DDTLA6NHG4 134 aaPredicted RBP10.56□□□□□ -0.72
SCFD1-202ENST00000396629 TRIM75PA6NK02 468 aa10.56□□□□□ -0.72
SCFD1-202ENST00000396629 EYA2O00167 538 aa10.56□□□□□ -0.72
SCFD1-202ENST00000396629 GCLCP48506 637 aaPredicted RBP10.56□□□□□ -0.72
SCFD1-202ENST00000396629 TRIM32Q13049 653 aa10.56□□□□□ -0.72
SCFD1-202ENST00000396629 FAM109BQ6ICB4 259 aaPredicted RBP10.56□□□□□ -0.72
SCFD1-202ENST00000396629 UBE2OQ9C0C9 1292 aaKnown RBP10.56□□□□□ -0.72
SCFD1-202ENST00000396629 SPINK5Q9NQ38 1064 aaPredicted RBP10.56□□□□□ -0.72
SCFD1-202ENST00000396629 COL2A1P02458 1487 aaPredicted RBP10.55□□□□□ -0.72
SCFD1-202ENST00000396629 SLURP2P0DP57 97 aa10.55□□□□□ -0.72
SCFD1-202ENST00000396629 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.55□□□□□ -0.72
SCFD1-202ENST00000396629 PFASO15067 1338 aa10.55□□□□□ -0.72
SCFD1-202ENST00000396629 POTEB2H3BUK9 544 aa10.55□□□□□ -0.72
SCFD1-202ENST00000396629 TBC1D12O60347 775 aa10.55□□□□□ -0.72
SCFD1-202ENST00000396629 MAP3K21Q5TCX8 1036 aa10.55□□□□□ -0.72
SCFD1-202ENST00000396629 ATG9AQ7Z3C6 839 aa10.55□□□□□ -0.72
SCFD1-202ENST00000396629 CCDC84Q86UT8 332 aaPredicted RBP10.55□□□□□ -0.72
SCFD1-202ENST00000396629 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.55□□□□□ -0.72
SCFD1-202ENST00000396629 FAM163AQ96GL9 167 aaPredicted RBP10.55□□□□□ -0.72
SCFD1-202ENST00000396629 DDX4Q9NQI0 724 aaKnown RBP10.55□□□□□ -0.72
SCFD1-202ENST00000396629 FOXD4L1Q9NU39 408 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms