RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 PRC1O43663 620 aa15.04■□□□□ -0
TRIM39-204ENST00000396548 HDLBPQ00341 1268 aaKnown RBP15.04■□□□□ -0
TRIM39-204ENST00000396548 DCAF8Q5TAQ9 597 aa15.04■□□□□ -0
TRIM39-204ENST00000396548 APOBEC3HQ6NTF7 200 aaKnown RBP15.04■□□□□ -0
TRIM39-204ENST00000396548 GMLQ99445 158 aa15.04■□□□□ -0
TRIM39-204ENST00000396548 ARPP21Q9UBL0 812 aaPredicted RBP15.04■□□□□ -0
TRIM39-204ENST00000396548 USP17L12C9JPN9 530 aa15.04■□□□□ -0
TRIM39-204ENST00000396548 USP17L21D6R901 530 aa15.04■□□□□ -0
TRIM39-204ENST00000396548 VIL1P09327 827 aaKnown RBP15.04■□□□□ -0
TRIM39-204ENST00000396548 IGDCC4Q8TDY8 1250 aa15.04■□□□□ -0
TRIM39-204ENST00000396548 CNNM2Q9H8M5 875 aa15.04■□□□□ -0
TRIM39-204ENST00000396548 GPHNQ9NQX3 736 aaPredicted RBP15.04■□□□□ -0
TRIM39-204ENST00000396548 SIPA1L1O43166 1804 aa15.04■□□□□ -0
TRIM39-204ENST00000396548 IARSP41252 1262 aaKnown RBP15.04■□□□□ -0
TRIM39-204ENST00000396548 BRF1Q92994 677 aa15.04■□□□□ -0
TRIM39-204ENST00000396548 ZDHHC15Q96MV8 337 aa15.04■□□□□ -0
TRIM39-204ENST00000396548 ZSWIM5Q9P217 1185 aa15.04■□□□□ -0
TRIM39-204ENST00000396548 B4E1Z4 1266 aa15.03■□□□□ -0
TRIM39-204ENST00000396548 PRELPP51888 382 aa15.03■□□□□ -0
TRIM39-204ENST00000396548 C12orf60Q5U649 245 aa15.03■□□□□ -0
TRIM39-204ENST00000396548 FBXW7Q969H0 707 aa15.03■□□□□ -0
TRIM39-204ENST00000396548 SPON1Q9HCB6 807 aa15.03■□□□□ -0
TRIM39-204ENST00000396548 CYP2D6P10635 497 aa15.03■□□□□ -0
TRIM39-204ENST00000396548 PCP11498 1178 aaKnown RBP15.03■□□□□ -0
TRIM39-204ENST00000396548 PLCG2P16885 1265 aa15.03■□□□□ -0
TRIM39-204ENST00000396548 MFSD6Q6ZSS7 791 aa15.03■□□□□ -0
TRIM39-204ENST00000396548 KRT23Q9C075 422 aa15.03■□□□□ -0
TRIM39-204ENST00000396548 FLT1P17948 1338 aa15.02■□□□□ -0
TRIM39-204ENST00000396548 SH2B2O14492 632 aaPredicted RBP15.02■□□□□ -0
TRIM39-204ENST00000396548 PFKFB2O60825 505 aa15.02■□□□□ -0
TRIM39-204ENST00000396548 USP17L8P0C7I0 530 aa15.02■□□□□ -0
TRIM39-204ENST00000396548 RAB3GAP1Q15042 981 aa15.02■□□□□ -0
TRIM39-204ENST00000396548 TGFBRAP1Q8WUH2 860 aa15.02■□□□□ -0
TRIM39-204ENST00000396548 ZNF274Q96GC6 653 aaPredicted RBP15.02■□□□□ -0
TRIM39-204ENST00000396548 MTA3Q9BTC8 594 aa15.02■□□□□ -0
TRIM39-204ENST00000396548 DICER1Q9UPY3 1922 aaKnown RBP15.02■□□□□ -0
TRIM39-204ENST00000396548 CRKP46108 304 aa15.02□□□□□ -0.01
TRIM39-204ENST00000396548 GTF3C6Q969F1 213 aa15.02□□□□□ -0.01
TRIM39-204ENST00000396548 SERPINA10Q9UK55 444 aa15.02□□□□□ -0.01
TRIM39-204ENST00000396548 BRPF3Q9ULD4 1205 aa15.02□□□□□ -0.01
TRIM39-204ENST00000396548 F8W031 263 aaPredicted RBP15.01□□□□□ -0.01
TRIM39-204ENST00000396548 ORC4O43929 436 aa15.01□□□□□ -0.01
TRIM39-204ENST00000396548 WDHD1O75717 1129 aaPredicted RBP15.01□□□□□ -0.01
TRIM39-204ENST00000396548 SCNN1DP51172 638 aa15.01□□□□□ -0.01
TRIM39-204ENST00000396548 APOBRQ0VD83 1088 aa15.01□□□□□ -0.01
TRIM39-204ENST00000396548 RALYLQ86SE5 291 aaKnown RBP15.01□□□□□ -0.01
TRIM39-204ENST00000396548 NECAB1Q8N987 351 aa15.01□□□□□ -0.01
TRIM39-204ENST00000396548 RNF41Q9H4P4 317 aaPredicted RBP15.01□□□□□ -0.01
TRIM39-204ENST00000396548 ZDHHC9Q9Y397 364 aa15.01□□□□□ -0.01
TRIM39-204ENST00000396548 MINDY4BA8MYZ0 360 aa15.01□□□□□ -0.01
TRIM39-204ENST00000396548 HSP90AA1P07900 732 aaKnown RBP15.01□□□□□ -0.01
TRIM39-204ENST00000396548 PDIA3P30101 505 aaKnown RBP15.01□□□□□ -0.01
TRIM39-204ENST00000396548 RSBN1LQ6PCB5 846 aaPredicted RBP15.01□□□□□ -0.01
TRIM39-204ENST00000396548 CCDC83Q8IWF9 413 aa15.01□□□□□ -0.01
TRIM39-204ENST00000396548 LARGE2Q8N3Y3 721 aa15.01□□□□□ -0.01
TRIM39-204ENST00000396548 TEKT1Q969V4 418 aa15.01□□□□□ -0.01
TRIM39-204ENST00000396548 NOL10Q9BSC4 688 aaKnown RBP15.01□□□□□ -0.01
TRIM39-204ENST00000396548 TAOK3Q9H2K8 898 aa15.01□□□□□ -0.01
TRIM39-204ENST00000396548 PPP1R1BQ9UD71 204 aaPredicted RBP15.01□□□□□ -0.01
TRIM39-204ENST00000396548 ZNRF3Q9ULT6 936 aa15.01□□□□□ -0.01
TRIM39-204ENST00000396548 PCDHAC2Q9Y5I4 1007 aa15.01□□□□□ -0.01
TRIM39-204ENST00000396548 TRDNQ13061 729 aa15.01□□□□□ -0.01
TRIM39-204ENST00000396548 CDC42EP5Q6NZY7 148 aa15.01□□□□□ -0.01
TRIM39-204ENST00000396548 TEX11Q8IYF3 940 aa15.01□□□□□ -0.01
TRIM39-204ENST00000396548 TMEM87BQ96K49 555 aa15.01□□□□□ -0.01
TRIM39-204ENST00000396548 LY9Q9HBG7 655 aa15.01□□□□□ -0.01
TRIM39-204ENST00000396548 HPS5Q9UPZ3 1129 aa15.01□□□□□ -0.01
TRIM39-204ENST00000396548 SBF1O95248 1867 aa15.01□□□□□ -0.01
TRIM39-204ENST00000396548 PSMD14O00487 310 aa15□□□□□ -0.01
TRIM39-204ENST00000396548 KDM4AO75164 1064 aa15□□□□□ -0.01
TRIM39-204ENST00000396548 USP5P45974 858 aa15□□□□□ -0.01
TRIM39-204ENST00000396548 SCRN1Q12765 414 aa15□□□□□ -0.01
TRIM39-204ENST00000396548 PKP1Q13835 747 aa15□□□□□ -0.01
TRIM39-204ENST00000396548 SENP2Q9HC62 589 aa15□□□□□ -0.01
TRIM39-204ENST00000396548 DDX4Q9NQI0 724 aaKnown RBP15□□□□□ -0.01
TRIM39-204ENST00000396548 MCM9Q9NXL9 1143 aa15□□□□□ -0.01
TRIM39-204ENST00000396548 NID2Q14112 1375 aa15□□□□□ -0.01
TRIM39-204ENST00000396548 SGMS1Q86VZ5 419 aa15□□□□□ -0.01
TRIM39-204ENST00000396548 KIAA0825Q8IV33 1275 aa15□□□□□ -0.01
TRIM39-204ENST00000396548 MAPKAPK5Q8IW41 473 aa15□□□□□ -0.01
TRIM39-204ENST00000396548 MYO3BQ8WXR4 1341 aa15□□□□□ -0.01
TRIM39-204ENST00000396548 PLCD1P51178 756 aa14.99□□□□□ -0.01
TRIM39-204ENST00000396548 BCS1LQ9Y276 419 aa14.99□□□□□ -0.01
TRIM39-204ENST00000396548 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.99□□□□□ -0.01
TRIM39-204ENST00000396548 LIFRP42702 1097 aa14.99□□□□□ -0.01
TRIM39-204ENST00000396548 SEC23AQ15436 765 aa14.99□□□□□ -0.01
TRIM39-204ENST00000396548 ANGEL1Q9UNK9 670 aaKnown RBP14.99□□□□□ -0.01
TRIM39-204ENST00000396548 CTDNEP1O95476 244 aa14.99□□□□□ -0.01
TRIM39-204ENST00000396548 CLEC17AQ6ZS10 378 aa14.98□□□□□ -0.01
TRIM39-204ENST00000396548 SMARCC2Q8TAQ2 1214 aa14.98□□□□□ -0.01
TRIM39-204ENST00000396548 GREB1LQ9C091 1923 aaPredicted RBP14.98□□□□□ -0.01
TRIM39-204ENST00000396548 RAD17O75943 681 aa14.98□□□□□ -0.01
TRIM39-204ENST00000396548 NT5C2P49902 561 aa14.98□□□□□ -0.01
TRIM39-204ENST00000396548 NIM1KQ8IY84 436 aa14.98□□□□□ -0.01
TRIM39-204ENST00000396548 USP40Q9NVE5 1235 aa14.98□□□□□ -0.01
TRIM39-204ENST00000396548 NPM3O75607 178 aaKnown RBP14.97□□□□□ -0.01
TRIM39-204ENST00000396548 CXCL9Q07325 125 aa14.97□□□□□ -0.01
TRIM39-204ENST00000396548 IDI2Q9BXS1 227 aa14.97□□□□□ -0.01
TRIM39-204ENST00000396548 FHDC1Q9C0D6 1143 aaPredicted RBP14.97□□□□□ -0.01
TRIM39-204ENST00000396548 STK3Q13188 491 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms