RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 LY9Q9HBG7 655 aa13.33□□□□□ -0.28
PDXDC1-202ENST00000396410 KCNJ14Q9UNX9 436 aa13.33□□□□□ -0.28
PDXDC1-202ENST00000396410 RTL9Q8NET4 1388 aa13.33□□□□□ -0.28
PDXDC1-202ENST00000396410 RFC4P35249 363 aa13.33□□□□□ -0.28
PDXDC1-202ENST00000396410 LIFRP42702 1097 aa13.33□□□□□ -0.28
PDXDC1-202ENST00000396410 DIS3L2Q8IYB7 885 aaKnown RBP13.33□□□□□ -0.28
PDXDC1-202ENST00000396410 EPB41L4AQ9HCS5 686 aaPredicted RBP13.33□□□□□ -0.28
PDXDC1-202ENST00000396410 KIF28PB7ZC32 967 aa13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 UBAP1LF5GYI3 381 aa13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 FOXP2O15409 715 aa13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 CTCFLQ8NI51 663 aaPredicted RBP13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 SENP2Q9HC62 589 aa13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 KIAA1468Q9P260 1216 aa13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 CCNL1Q9UK58 526 aaPredicted RBP13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 DEXIO95424 95 aa13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 TERF1P54274 439 aa13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 RPS8P62241 208 aaKnown RBP13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 C16orf45Q96MC5 204 aaPredicted RBP13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 ANKRD2Q9GZV1 360 aa13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 SPATA31A5Q5VU36 1347 aa13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 SPATA31A7Q8IWB4 1347 aa13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 RRP9O43818 475 aaKnown RBP13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 HIBADHP31937 336 aaKnown RBP13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 SLC39A14Q15043 492 aa13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 PRIMPOLQ96LW4 560 aa13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 NUP188Q5SRE5 1749 aa13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 TCRBV5S4A2TA0A5A2 114 aa13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 CMA1P23946 247 aa13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 USP5P45974 858 aa13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 ZNF654Q8IZM8 581 aa13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 PYCARDQ9ULZ3 195 aa13.32□□□□□ -0.28
PDXDC1-202ENST00000396410 AP5Z1O43299 807 aa13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 RASSF8Q8NHQ8 419 aa13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 IGDCC4Q8TDY8 1250 aa13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 NRBP1Q9UHY1 535 aa13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 UBR2Q8IWV8 1755 aa13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 DISP2A7MBM2 1401 aa13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 SMIM5Q71RC9 77 aa13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 BSDC1Q9NW68 430 aaPredicted RBP13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 TSPY2A6NKD2 308 aa13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 FMR1NBQ8N0W7 255 aaPredicted RBP13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 PDILTQ8N807 584 aa13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 KRI1Q8N9T8 703 aaKnown RBP13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 FANCBQ8NB91 859 aa13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 STAG1Q8WVM7 1258 aa13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 AATFQ9NY61 560 aaKnown RBP eCLIP13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 TNKSO95271 1327 aa13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 SPEF2Q9C093 1822 aa13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 TJP1Q07157 1748 aa13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 COL14A1Q05707 1796 aaKnown RBP13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 NEMFO60524 1076 aa13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 FMNL1O95466 1100 aaPredicted RBP13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 DYNLL1P63167 89 aaKnown RBP13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 SNW1Q13573 536 aaKnown RBP13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 RBM43Q6ZSC3 357 aaKnown RBP13.31□□□□□ -0.28
PDXDC1-202ENST00000396410 BTBD18B2RXH4 712 aa13.3□□□□□ -0.28
PDXDC1-202ENST00000396410 DYNC1I1O14576 645 aa13.3□□□□□ -0.28
PDXDC1-202ENST00000396410 PDE4BQ07343 736 aa13.3□□□□□ -0.28
PDXDC1-202ENST00000396410 LRMPQ12912 555 aa13.3□□□□□ -0.28
PDXDC1-202ENST00000396410 SGMS1Q86VZ5 419 aa13.3□□□□□ -0.28
PDXDC1-202ENST00000396410 NOSTRINQ8IVI9 506 aa13.3□□□□□ -0.28
PDXDC1-202ENST00000396410 XIRP1Q702N8 1843 aaKnown RBP13.3□□□□□ -0.28
PDXDC1-202ENST00000396410 SPECC1Q5M775 1068 aa13.3□□□□□ -0.28
PDXDC1-202ENST00000396410 ILDR1Q86SU0 546 aaPredicted RBP13.3□□□□□ -0.28
PDXDC1-202ENST00000396410 SRP68Q9UHB9 627 aaKnown RBP13.3□□□□□ -0.28
PDXDC1-202ENST00000396410 RILPL1Q5EBL4 403 aa13.3□□□□□ -0.28
PDXDC1-202ENST00000396410 TMC6Q7Z403 805 aa13.3□□□□□ -0.28
PDXDC1-202ENST00000396410 CLIC6Q96NY7 704 aa13.3□□□□□ -0.28
PDXDC1-202ENST00000396410 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.3□□□□□ -0.28
PDXDC1-202ENST00000396410 NBPF3Q9H094 633 aa13.3□□□□□ -0.28
PDXDC1-202ENST00000396410 CABP5Q9NP86 173 aa13.3□□□□□ -0.28
PDXDC1-202ENST00000396410 MINPP1Q9UNW1 487 aa13.3□□□□□ -0.28
PDXDC1-202ENST00000396410 CUTAO60888 179 aa13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 IFNAR1P17181 557 aa13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 TBC1D9BQ66K14 1250 aa13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 SPTY2D1Q68D10 685 aaPredicted RBP13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 CELF1Q92879 486 aaKnown RBP13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 PNPLA7Q6ZV29 1317 aa13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 GLI3P10071 1580 aa13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 LMOD1P29536 600 aaPredicted RBP13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 NLRP12P59046 1061 aa13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 CFAP100Q494V2 611 aa13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 FAM182BQ5T319 152 aa13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 BARGINQ6ZT62 677 aa13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 LINC00116Q8NCU8 138 aa13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 KCNH3Q9ULD8 1083 aa13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 TNNT1P13805 278 aa13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 BCL11BQ9C0K0 894 aaPredicted RBP13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 MKNK2Q9HBH9 465 aa13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 USP17L12C9JPN9 530 aa13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 USP17L21D6R901 530 aa13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 CBFA2T2O43439 604 aa13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 SKILP12757 684 aa13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 GSDMDP57764 484 aa13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 KIAA1524Q8TCG1 905 aa13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 ZSCAN10Q96SZ4 725 aaPredicted RBP13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 DACH1Q9UI36 760 aa13.29□□□□□ -0.28
PDXDC1-202ENST00000396410 hCG_1642624A0A1W2PR95 340 aa13.28□□□□□ -0.28
PDXDC1-202ENST00000396410 PPP6R2O75170 966 aa13.28□□□□□ -0.28
PDXDC1-202ENST00000396410 CALM1P0DP23 149 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms