RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 FAM227BQ96M60 508 aa25.54■■□□□ 1.68
FXN-202ENST00000396364 DHX36Q9H2U1 1008 aaKnown RBP25.54■■□□□ 1.68
FXN-202ENST00000396364 CDK5RAP2Q96SN8 1893 aa25.53■■□□□ 1.68
FXN-202ENST00000396364 A0A0D9SFI3 127 aa25.53■■□□□ 1.68
FXN-202ENST00000396364 M0R2C6 588 aa25.53■■□□□ 1.68
FXN-202ENST00000396364 TCP10Q12799 353 aa25.53■■□□□ 1.68
FXN-202ENST00000396364 NFIAQ12857 509 aa25.53■■□□□ 1.68
FXN-202ENST00000396364 SEC62Q99442 399 aaKnown RBP25.53■■□□□ 1.68
FXN-202ENST00000396364 GLIS2Q9BZE0 524 aaPredicted RBP25.53■■□□□ 1.68
FXN-202ENST00000396364 COL2A1P02458 1487 aaPredicted RBP25.53■■□□□ 1.68
FXN-202ENST00000396364 APPP05067 770 aa25.52■■□□□ 1.68
FXN-202ENST00000396364 GIMAP6Q6P9H5 292 aa25.52■■□□□ 1.68
FXN-202ENST00000396364 MAPKAPK5Q8IW41 473 aa25.52■■□□□ 1.68
FXN-202ENST00000396364 OSBPL5Q9H0X9 879 aaPredicted RBP25.52■■□□□ 1.68
FXN-202ENST00000396364 FAM198AQ9UFP1 575 aa25.52■■□□□ 1.68
FXN-202ENST00000396364 FLT1P17948 1338 aa25.52■■□□□ 1.68
FXN-202ENST00000396364 CCDC171Q6TFL3 1326 aa25.52■■□□□ 1.68
FXN-202ENST00000396364 ADM5C9JUS6 153 aa25.51■■□□□ 1.67
FXN-202ENST00000396364 NAV1Q8NEY1 1877 aa25.51■■□□□ 1.67
FXN-202ENST00000396364 PATL2C9JE40 543 aaKnown RBP25.5■■□□□ 1.67
FXN-202ENST00000396364 EIF5BO60841 1220 aaKnown RBP25.5■■□□□ 1.67
FXN-202ENST00000396364 HLA-DOAP06340 250 aa25.5■■□□□ 1.67
FXN-202ENST00000396364 CNTNAP1P78357 1384 aa25.5■■□□□ 1.67
FXN-202ENST00000396364 MYH1P12882 1939 aa25.49■■□□□ 1.67
FXN-202ENST00000396364 TTC6Q86TZ1 520 aa25.49■■□□□ 1.67
FXN-202ENST00000396364 SDR42E1Q8WUS8 393 aa25.49■■□□□ 1.67
FXN-202ENST00000396364 CDCA5Q96FF9 252 aa25.49■■□□□ 1.67
FXN-202ENST00000396364 TMEM39BQ9GZU3 492 aa25.49■■□□□ 1.67
FXN-202ENST00000396364 DDX4Q9NQI0 724 aaKnown RBP25.49■■□□□ 1.67
FXN-202ENST00000396364 ATRNL1Q5VV63 1379 aa25.48■■□□□ 1.67
FXN-202ENST00000396364 POLR3DP05423 398 aaPredicted RBP25.48■■□□□ 1.67
FXN-202ENST00000396364 TDO2P48775 406 aa25.48■■□□□ 1.67
FXN-202ENST00000396364 DCAF15Q66K64 600 aa25.48■■□□□ 1.67
FXN-202ENST00000396364 KIAA1211Q6ZU35 1233 aa25.48■■□□□ 1.67
FXN-202ENST00000396364 CSRNP1Q96S65 589 aa25.48■■□□□ 1.67
FXN-202ENST00000396364 DCP1AQ9NPI6 582 aaPredicted RBP25.48■■□□□ 1.67
FXN-202ENST00000396364 MCM9Q9NXL9 1143 aa25.48■■□□□ 1.67
FXN-202ENST00000396364 SCAF8Q9UPN6 1271 aaKnown RBP25.48■■□□□ 1.67
FXN-202ENST00000396364 ITGBL1O95965 494 aaPredicted RBP25.47■■□□□ 1.67
FXN-202ENST00000396364 CCDC129Q6ZRS4 1044 aa25.47■■□□□ 1.67
FXN-202ENST00000396364 TRIM34Q9BYJ4 488 aa25.47■■□□□ 1.67
FXN-202ENST00000396364 NAPBQ9H115 298 aa25.47■■□□□ 1.67
FXN-202ENST00000396364 PI4KBQ9UBF8 816 aa25.47■■□□□ 1.67
FXN-202ENST00000396364 ARPP21Q9UBL0 812 aaPredicted RBP25.47■■□□□ 1.67
FXN-202ENST00000396364 TRPM7Q96QT4 1865 aa25.47■■□□□ 1.67
FXN-202ENST00000396364 PRKAB2O43741 272 aa25.46■■□□□ 1.67
FXN-202ENST00000396364 TAOK2Q9UL54 1235 aa25.46■■□□□ 1.67
FXN-202ENST00000396364 GSG1L2A8MUP6 293 aa25.45■■□□□ 1.66
FXN-202ENST00000396364 SGSM2O43147 1006 aa25.45■■□□□ 1.66
FXN-202ENST00000396364 PPP1R12BO60237 982 aaPredicted RBP25.45■■□□□ 1.66
FXN-202ENST00000396364 ZNF589Q86UQ0 364 aaPredicted RBP25.45■■□□□ 1.66
FXN-202ENST00000396364 ZNF408Q9H9D4 720 aa25.45■■□□□ 1.66
FXN-202ENST00000396364 SAP30BPQ9UHR5 308 aaKnown RBP25.45■■□□□ 1.66
FXN-202ENST00000396364 TRAF5O00463 557 aa25.44■■□□□ 1.66
FXN-202ENST00000396364 NBPF12Q5TAG4 269 aaPredicted RBP25.44■■□□□ 1.66
FXN-202ENST00000396364 IFNL3Q8IZI9 196 aa25.44■■□□□ 1.66
FXN-202ENST00000396364 CRACR2BQ8N4Y2 399 aaPredicted RBP25.44■■□□□ 1.66
FXN-202ENST00000396364 TEPSINQ96N21 525 aa25.44■■□□□ 1.66
FXN-202ENST00000396364 ESYT1Q9BSJ8 1104 aa25.44■■□□□ 1.66
FXN-202ENST00000396364 MKRN1Q9UHC7 482 aaKnown RBP25.44■■□□□ 1.66
FXN-202ENST00000396364 PASKQ96RG2 1323 aa25.43■■□□□ 1.66
FXN-202ENST00000396364 HSPD1P10809 573 aaKnown RBP25.43■■□□□ 1.66
FXN-202ENST00000396364 FKBP1BP68106 108 aa25.43■■□□□ 1.66
FXN-202ENST00000396364 FOXP4Q8IVH2 680 aaPredicted RBP25.43■■□□□ 1.66
FXN-202ENST00000396364 ZFPM1Q8IX07 1006 aa25.43■■□□□ 1.66
FXN-202ENST00000396364 C2orf69Q8N8R5 385 aa25.43■■□□□ 1.66
FXN-202ENST00000396364 DSCC1Q9BVC3 393 aa25.43■■□□□ 1.66
FXN-202ENST00000396364 CTNNA3Q9UI47 895 aa25.43■■□□□ 1.66
FXN-202ENST00000396364 HERC5Q9UII4 1024 aaKnown RBP25.43■■□□□ 1.66
FXN-202ENST00000396364 PALD1Q9ULE6 856 aa25.43■■□□□ 1.66
FXN-202ENST00000396364 BAZ2AQ9UIF9 1905 aaKnown RBP25.43■■□□□ 1.66
FXN-202ENST00000396364 ZMYM6O95789 1325 aa25.42■■□□□ 1.66
FXN-202ENST00000396364 DDTLA6NHG4 134 aaPredicted RBP25.42■■□□□ 1.66
FXN-202ENST00000396364 CELF2O95319 508 aaKnown RBP25.42■■□□□ 1.66
FXN-202ENST00000396364 SLC3A2P08195 630 aaKnown RBP25.42■■□□□ 1.66
FXN-202ENST00000396364 TTLL12Q14166 644 aaPredicted RBP25.42■■□□□ 1.66
FXN-202ENST00000396364 ALX1Q15699 326 aa25.42■■□□□ 1.66
FXN-202ENST00000396364 PRAMEF18Q5VWM3 479 aa25.42■■□□□ 1.66
FXN-202ENST00000396364 ARMC9Q7Z3E5 817 aa25.42■■□□□ 1.66
FXN-202ENST00000396364 DDX60LQ5H9U9 1706 aaKnown RBP25.42■■□□□ 1.66
FXN-202ENST00000396364 SBK1Q52WX2 424 aa25.41■■□□□ 1.66
FXN-202ENST00000396364 EHD4Q9H223 541 aa25.41■■□□□ 1.66
FXN-202ENST00000396364 ZNF287Q9HBT7 754 aa25.41■■□□□ 1.66
FXN-202ENST00000396364 SERPINB13Q9UIV8 391 aa25.41■■□□□ 1.66
FXN-202ENST00000396364 USP17L12C9JPN9 530 aa25.4■■□□□ 1.66
FXN-202ENST00000396364 USP17L21D6R901 530 aa25.4■■□□□ 1.66
FXN-202ENST00000396364 TBC1D12O60347 775 aa25.4■■□□□ 1.66
FXN-202ENST00000396364 REC8O95072 547 aa25.4■■□□□ 1.66
FXN-202ENST00000396364 IREB2P48200 963 aaKnown RBP25.4■■□□□ 1.66
FXN-202ENST00000396364 ZNF341Q9BYN7 854 aa25.4■■□□□ 1.66
FXN-202ENST00000396364 PAPPA2Q9BXP8 1791 aa25.39■■□□□ 1.66
FXN-202ENST00000396364 VPS53Q5VIR6 699 aa25.39■■□□□ 1.66
FXN-202ENST00000396364 CTR9Q6PD62 1173 aa25.39■■□□□ 1.66
FXN-202ENST00000396364 SH3BP5LQ7L8J4 393 aa25.39■■□□□ 1.66
FXN-202ENST00000396364 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.39■■□□□ 1.66
FXN-202ENST00000396364 GBA2Q9HCG7 927 aaPredicted RBP25.39■■□□□ 1.66
FXN-202ENST00000396364 ANO2Q9NQ90 1003 aa25.39■■□□□ 1.66
FXN-202ENST00000396364 LAMB1P07942 1786 aa25.39■■□□□ 1.65
FXN-202ENST00000396364 MINDY4BA8MYZ0 360 aa25.38■■□□□ 1.65
FXN-202ENST00000396364 C12orf60Q5U649 245 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms