RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 USP17L21D6R901 530 aa17.95■□□□□ 0.46
PTPN20-206ENST00000395722 GRIN3BO60391 1043 aa17.95■□□□□ 0.46
PTPN20-206ENST00000395722 NPM3O75607 178 aaKnown RBP17.95■□□□□ 0.46
PTPN20-206ENST00000395722 CD2BP2O95400 341 aaKnown RBP17.95■□□□□ 0.46
PTPN20-206ENST00000395722 SPDYE6P0CI01 402 aa17.95■□□□□ 0.46
PTPN20-206ENST00000395722 CYP46A1Q9Y6A2 500 aa17.95■□□□□ 0.46
PTPN20-206ENST00000395722 TACC3Q9Y6A5 838 aa17.95■□□□□ 0.46
PTPN20-206ENST00000395722 ROBO3Q96MS0 1386 aa17.94■□□□□ 0.46
PTPN20-206ENST00000395722 RPS6KB1P23443 525 aa17.94■□□□□ 0.46
PTPN20-206ENST00000395722 GMPSP49915 693 aaPredicted RBP17.94■□□□□ 0.46
PTPN20-206ENST00000395722 GPR162Q16538 588 aa17.94■□□□□ 0.46
PTPN20-206ENST00000395722 BLOC1S2Q6QNY1 142 aa17.94■□□□□ 0.46
PTPN20-206ENST00000395722 MAPKAPK5Q8IW41 473 aa17.94■□□□□ 0.46
PTPN20-206ENST00000395722 STAG1Q8WVM7 1258 aa17.94■□□□□ 0.46
PTPN20-206ENST00000395722 PRMT6Q96LA8 375 aaPredicted RBP17.94■□□□□ 0.46
PTPN20-206ENST00000395722 IDI2Q9BXS1 227 aa17.94■□□□□ 0.46
PTPN20-206ENST00000395722 TBC1D2Q9BYX2 928 aa17.94■□□□□ 0.46
PTPN20-206ENST00000395722 ALDH8A1Q9H2A2 487 aaPredicted RBP17.94■□□□□ 0.46
PTPN20-206ENST00000395722 RNF181Q9P0P0 153 aa17.94■□□□□ 0.46
PTPN20-206ENST00000395722 ST18O60284 1047 aa17.93■□□□□ 0.46
PTPN20-206ENST00000395722 HMGB1P09429 215 aaKnown RBP17.93■□□□□ 0.46
PTPN20-206ENST00000395722 FGRP09769 529 aa17.93■□□□□ 0.46
PTPN20-206ENST00000395722 RBM5P52756 815 aaKnown RBP eCLIP17.93■□□□□ 0.46
PTPN20-206ENST00000395722 C12orf60Q5U649 245 aa17.93■□□□□ 0.46
PTPN20-206ENST00000395722 C9orf131Q5VYM1 1079 aa17.93■□□□□ 0.46
PTPN20-206ENST00000395722 IPO9Q96P70 1041 aaKnown RBP17.93■□□□□ 0.46
PTPN20-206ENST00000395722 DDX4Q9NQI0 724 aaKnown RBP17.93■□□□□ 0.46
PTPN20-206ENST00000395722 MCM9Q9NXL9 1143 aa17.93■□□□□ 0.46
PTPN20-206ENST00000395722 MYH1P12882 1939 aa17.93■□□□□ 0.46
PTPN20-206ENST00000395722 CYP2D7A0A087X1C5 515 aa17.93■□□□□ 0.46
PTPN20-206ENST00000395722 CPA1P15085 419 aa17.93■□□□□ 0.46
PTPN20-206ENST00000395722 CTDSPL2Q05D32 466 aa17.93■□□□□ 0.46
PTPN20-206ENST00000395722 DLGAP5Q15398 846 aa17.93■□□□□ 0.46
PTPN20-206ENST00000395722 AKNAD1Q5T1N1 836 aa17.93■□□□□ 0.46
PTPN20-206ENST00000395722 MB21D2Q8IYB1 491 aaPredicted RBP17.93■□□□□ 0.46
PTPN20-206ENST00000395722 GPC2Q8N158 579 aa17.93■□□□□ 0.46
PTPN20-206ENST00000395722 MINDY4BA8MYZ0 360 aa17.92■□□□□ 0.46
PTPN20-206ENST00000395722 SMIM22K7EJ46 135 aa17.92■□□□□ 0.46
PTPN20-206ENST00000395722 CYP2D6P10635 497 aa17.92■□□□□ 0.46
PTPN20-206ENST00000395722 EXOSC10Q01780 885 aaKnown RBP17.92■□□□□ 0.46
PTPN20-206ENST00000395722 GJA3Q9Y6H8 435 aa17.92■□□□□ 0.46
PTPN20-206ENST00000395722 SHTN1A0MZ66 631 aa17.91■□□□□ 0.46
PTPN20-206ENST00000395722 PCP11498 1178 aaKnown RBP17.91■□□□□ 0.46
PTPN20-206ENST00000395722 BECN1Q14457 450 aa17.91■□□□□ 0.46
PTPN20-206ENST00000395722 DHX32Q7L7V1 743 aaKnown RBP17.91■□□□□ 0.46
PTPN20-206ENST00000395722 NCOA7Q8NI08 942 aa17.91■□□□□ 0.46
PTPN20-206ENST00000395722 RNF41Q9H4P4 317 aaPredicted RBP17.91■□□□□ 0.46
PTPN20-206ENST00000395722 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.91■□□□□ 0.46
PTPN20-206ENST00000395722 NEDD4P46934 1319 aa17.91■□□□□ 0.46
PTPN20-206ENST00000395722 WDR19Q8NEZ3 1342 aa17.91■□□□□ 0.46
PTPN20-206ENST00000395722 EVX2Q03828 476 aa17.91■□□□□ 0.46
PTPN20-206ENST00000395722 NFIAQ12857 509 aa17.91■□□□□ 0.46
PTPN20-206ENST00000395722 TDRD3Q9H7E2 651 aaKnown RBP17.91■□□□□ 0.46
PTPN20-206ENST00000395722 MYOZ2Q9NPC6 264 aa17.91■□□□□ 0.46
PTPN20-206ENST00000395722 PDRG1Q9NUG6 133 aa17.91■□□□□ 0.46
PTPN20-206ENST00000395722 FAM198AQ9UFP1 575 aa17.91■□□□□ 0.46
PTPN20-206ENST00000395722 COL2A1P02458 1487 aaPredicted RBP17.91■□□□□ 0.46
PTPN20-206ENST00000395722 ZC3H4Q9UPT8 1303 aaKnown RBP17.9■□□□□ 0.46
PTPN20-206ENST00000395722 MCM2P49736 904 aa17.9■□□□□ 0.46
PTPN20-206ENST00000395722 SPDYE2Q495Y8 402 aa17.9■□□□□ 0.46
PTPN20-206ENST00000395722 MFSD6Q6ZSS7 791 aa17.9■□□□□ 0.46
PTPN20-206ENST00000395722 HSCBQ8IWL3 235 aa17.9■□□□□ 0.46
PTPN20-206ENST00000395722 OSBPL5Q9H0X9 879 aaPredicted RBP17.9■□□□□ 0.46
PTPN20-206ENST00000395722 CNNM2Q9H8M5 875 aa17.9■□□□□ 0.46
PTPN20-206ENST00000395722 CNOT7Q9UIV1 285 aaKnown RBP17.9■□□□□ 0.46
PTPN20-206ENST00000395722 FKBP1CQ5VVH2 108 aa17.9■□□□□ 0.46
PTPN20-206ENST00000395722 MICALL2Q8IY33 904 aa17.9■□□□□ 0.46
PTPN20-206ENST00000395722 FBXL16Q8N461 479 aa17.9■□□□□ 0.46
PTPN20-206ENST00000395722 NKX2-3Q8TAU0 364 aa17.9■□□□□ 0.46
PTPN20-206ENST00000395722 INCENPQ9NQS7 918 aa17.9■□□□□ 0.46
PTPN20-206ENST00000395722 ZNF70Q9UC06 446 aaPredicted RBP17.9■□□□□ 0.46
PTPN20-206ENST00000395722 SAP30BPQ9UHR5 308 aaKnown RBP17.9■□□□□ 0.46
PTPN20-206ENST00000395722 ORC4O43929 436 aa17.89■□□□□ 0.45
PTPN20-206ENST00000395722 ENTPD3O75355 529 aa17.89■□□□□ 0.45
PTPN20-206ENST00000395722 AK2P54819 239 aa17.89■□□□□ 0.45
PTPN20-206ENST00000395722 ANTXR2P58335 489 aa17.89■□□□□ 0.45
PTPN20-206ENST00000395722 TRDNQ13061 729 aa17.89■□□□□ 0.45
PTPN20-206ENST00000395722 RALYLQ86SE5 291 aaKnown RBP17.89■□□□□ 0.45
PTPN20-206ENST00000395722 AMOTL1Q8IY63 956 aa17.89■□□□□ 0.45
PTPN20-206ENST00000395722 AGXT2Q9BYV1 514 aa17.89■□□□□ 0.45
PTPN20-206ENST00000395722 KRT23Q9C075 422 aa17.89■□□□□ 0.45
PTPN20-206ENST00000395722 K7ELQ4 463 aaPredicted RBP17.88■□□□□ 0.45
PTPN20-206ENST00000395722 WNT10BO00744 389 aa17.88■□□□□ 0.45
PTPN20-206ENST00000395722 SLC3A2P08195 630 aaKnown RBP17.88■□□□□ 0.45
PTPN20-206ENST00000395722 PLCD1P51178 756 aa17.88■□□□□ 0.45
PTPN20-206ENST00000395722 PICALMQ13492 652 aa17.88■□□□□ 0.45
PTPN20-206ENST00000395722 GPRC5DQ9NZD1 345 aa17.88■□□□□ 0.45
PTPN20-206ENST00000395722 ATRNL1Q5VV63 1379 aa17.88■□□□□ 0.45
PTPN20-206ENST00000395722 POLR3DP05423 398 aaPredicted RBP17.88■□□□□ 0.45
PTPN20-206ENST00000395722 MCM5P33992 734 aa17.88■□□□□ 0.45
PTPN20-206ENST00000395722 NT5C2P49902 561 aa17.88■□□□□ 0.45
PTPN20-206ENST00000395722 CACNB3P54284 484 aa17.88■□□□□ 0.45
PTPN20-206ENST00000395722 B4E1Z4 1266 aa17.87■□□□□ 0.45
PTPN20-206ENST00000395722 TOB2Q14106 344 aaPredicted RBP17.87■□□□□ 0.45
PTPN20-206ENST00000395722 CYB5R4Q7L1T6 521 aa17.87■□□□□ 0.45
PTPN20-206ENST00000395722 TTC6Q86TZ1 520 aa17.87■□□□□ 0.45
PTPN20-206ENST00000395722 ZFPM1Q8IX07 1006 aa17.87■□□□□ 0.45
PTPN20-206ENST00000395722 TCEANC2Q96MN5 208 aa17.87■□□□□ 0.45
PTPN20-206ENST00000395722 SIPA1L1O43166 1804 aa17.87■□□□□ 0.45
PTPN20-206ENST00000395722 EGFRP00533 1210 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms