RNA–Protein interactions for RNA: ENST00000395422.3

CHCHD2-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-201ENST00000395422 GADL1Q6ZQY3 521 aa16.93■□□□□ 0.3
CHCHD2-201ENST00000395422 SH3BP5LQ7L8J4 393 aa16.93■□□□□ 0.3
CHCHD2-201ENST00000395422 FASTKD5Q7L8L6 764 aaKnown RBP16.93■□□□□ 0.3
CHCHD2-201ENST00000395422 SCYL3Q8IZE3 742 aa16.93■□□□□ 0.3
CHCHD2-201ENST00000395422 GDF15Q99988 308 aa16.93■□□□□ 0.3
CHCHD2-201ENST00000395422 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.93■□□□□ 0.3
CHCHD2-201ENST00000395422 AFG3L2Q9Y4W6 797 aa16.93■□□□□ 0.3
CHCHD2-201ENST00000395422 CACNA1FO60840 1977 aa16.93■□□□□ 0.3
CHCHD2-201ENST00000395422 RFX5P48382 616 aaPredicted RBP16.91■□□□□ 0.3
CHCHD2-201ENST00000395422 CCDC84Q86UT8 332 aaPredicted RBP16.91■□□□□ 0.3
CHCHD2-201ENST00000395422 LPIN2Q92539 896 aa16.91■□□□□ 0.3
CHCHD2-201ENST00000395422 PICK1Q9NRD5 415 aa16.91■□□□□ 0.3
CHCHD2-201ENST00000395422 TAOK2Q9UL54 1235 aa16.91■□□□□ 0.3
CHCHD2-201ENST00000395422 ZMYND8Q9ULU4 1186 aaPredicted RBP16.91■□□□□ 0.3
CHCHD2-201ENST00000395422 SLC45A1Q9Y2W3 748 aa16.91■□□□□ 0.3
CHCHD2-201ENST00000395422 CUL9Q8IWT3 2517 aa16.91■□□□□ 0.3
CHCHD2-201ENST00000395422 RFX7Q2KHR2 1363 aa16.9■□□□□ 0.3
CHCHD2-201ENST00000395422 UNC80Q8N2C7 3258 aa16.9■□□□□ 0.3
CHCHD2-201ENST00000395422 SLC5A1P13866 664 aa16.9■□□□□ 0.3
CHCHD2-201ENST00000395422 BMP8BP34820 402 aa16.9■□□□□ 0.3
CHCHD2-201ENST00000395422 ZEB1P37275 1124 aaPredicted RBP16.9■□□□□ 0.3
CHCHD2-201ENST00000395422 RGS3P49796 1198 aa16.9■□□□□ 0.3
CHCHD2-201ENST00000395422 Q7L0L9 218 aa16.9■□□□□ 0.3
CHCHD2-201ENST00000395422 C7orf61Q8IZ16 206 aa16.9■□□□□ 0.3
CHCHD2-201ENST00000395422 ANKRD13CQ8N6S4 541 aa16.9■□□□□ 0.3
CHCHD2-201ENST00000395422 SMCR8Q8TEV9 937 aaPredicted RBP16.9■□□□□ 0.3
CHCHD2-201ENST00000395422 DDTLA6NHG4 134 aaPredicted RBP16.89■□□□□ 0.29
CHCHD2-201ENST00000395422 TRIM75PA6NK02 468 aa16.89■□□□□ 0.29
CHCHD2-201ENST00000395422 EYA2O00167 538 aa16.89■□□□□ 0.29
CHCHD2-201ENST00000395422 LDHBP07195 334 aaKnown RBP16.89■□□□□ 0.29
CHCHD2-201ENST00000395422 MNX1P50219 401 aaPredicted RBP16.89■□□□□ 0.29
CHCHD2-201ENST00000395422 MAP3K10Q02779 954 aa16.89■□□□□ 0.29
CHCHD2-201ENST00000395422 TREML2Q5T2D2 321 aa16.89■□□□□ 0.29
CHCHD2-201ENST00000395422 ATG9AQ7Z3C6 839 aa16.89■□□□□ 0.29
CHCHD2-201ENST00000395422 NECAB2Q7Z6G3 386 aa16.89■□□□□ 0.29
CHCHD2-201ENST00000395422 IDI2Q9BXS1 227 aa16.89■□□□□ 0.29
CHCHD2-201ENST00000395422 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.89■□□□□ 0.29
CHCHD2-201ENST00000395422 USP44Q9H0E7 712 aa16.89■□□□□ 0.29
CHCHD2-201ENST00000395422 DDX4Q9NQI0 724 aaKnown RBP16.89■□□□□ 0.29
CHCHD2-201ENST00000395422 CAPN2P17655 700 aa16.88■□□□□ 0.29
CHCHD2-201ENST00000395422 TRIM32Q13049 653 aa16.88■□□□□ 0.29
CHCHD2-201ENST00000395422 DEFB123Q8N688 67 aa16.88■□□□□ 0.29
CHCHD2-201ENST00000395422 ENTPD3O75355 529 aa16.87■□□□□ 0.29
CHCHD2-201ENST00000395422 SYN1P17600 705 aa16.87■□□□□ 0.29
CHCHD2-201ENST00000395422 MRPL50Q8N5N7 158 aaKnown RBP16.87■□□□□ 0.29
CHCHD2-201ENST00000395422 COA7Q96BR5 231 aa16.87■□□□□ 0.29
CHCHD2-201ENST00000395422 AGTPBP1Q9UPW5 1226 aa16.87■□□□□ 0.29
CHCHD2-201ENST00000395422 GAKO14976 1311 aa16.87■□□□□ 0.29
CHCHD2-201ENST00000395422 SALL1Q9NSC2 1324 aa16.87■□□□□ 0.29
CHCHD2-201ENST00000395422 MGAMO43451 1857 aa16.86■□□□□ 0.29
CHCHD2-201ENST00000395422 CTNND1O60716 968 aaKnown RBP16.86■□□□□ 0.29
CHCHD2-201ENST00000395422 PHKA1P46020 1223 aa16.86■□□□□ 0.29
CHCHD2-201ENST00000395422 FAM110CQ1W6H9 321 aa16.86■□□□□ 0.29
CHCHD2-201ENST00000395422 GPR153Q6NV75 609 aa16.86■□□□□ 0.29
CHCHD2-201ENST00000395422 LRRFIP2Q9Y608 721 aaKnown RBP16.86■□□□□ 0.29
CHCHD2-201ENST00000395422 VCANP13611 3396 aa16.85■□□□□ 0.29
CHCHD2-201ENST00000395422 MAGEA10P43363 369 aaPredicted RBP16.85■□□□□ 0.29
CHCHD2-201ENST00000395422 LRIT3Q3SXY7 679 aa16.85■□□□□ 0.29
CHCHD2-201ENST00000395422 ZSCAN29Q8IWY8 852 aaPredicted RBP16.85■□□□□ 0.29
CHCHD2-201ENST00000395422 ANKLE1Q8NAG6 615 aa16.85■□□□□ 0.29
CHCHD2-201ENST00000395422 MRS2Q9HD23 443 aa16.85■□□□□ 0.29
CHCHD2-201ENST00000395422 GJD2Q9UKL4 321 aa16.85■□□□□ 0.29
CHCHD2-201ENST00000395422 ALPK3Q96L96 1907 aa16.85■□□□□ 0.29
CHCHD2-201ENST00000395422 FAM196BA6NMK8 535 aa16.84■□□□□ 0.29
CHCHD2-201ENST00000395422 HMGCRP04035 888 aa16.84■□□□□ 0.29
CHCHD2-201ENST00000395422 PICALMQ13492 652 aa16.84■□□□□ 0.29
CHCHD2-201ENST00000395422 ATP2B3Q16720 1220 aa16.84■□□□□ 0.29
CHCHD2-201ENST00000395422 SIL1Q9H173 461 aa16.84■□□□□ 0.29
CHCHD2-201ENST00000395422 MTMR10Q9NXD2 777 aa16.84■□□□□ 0.29
CHCHD2-201ENST00000395422 STXBP5LQ9Y2K9 1186 aa16.84■□□□□ 0.29
CHCHD2-201ENST00000395422 ADORA1P30542 326 aa16.83■□□□□ 0.28
CHCHD2-201ENST00000395422 TDHQ8IZJ6 230 aa16.83■□□□□ 0.28
CHCHD2-201ENST00000395422 NBPF3Q9H094 633 aa16.83■□□□□ 0.28
CHCHD2-201ENST00000395422 GNL3LQ9NVN8 582 aaKnown RBP16.83■□□□□ 0.28
CHCHD2-201ENST00000395422 DENND2AQ9ULE3 1009 aa16.83■□□□□ 0.28
CHCHD2-201ENST00000395422 PFASO15067 1338 aa16.82■□□□□ 0.28
CHCHD2-201ENST00000395422 RPTORQ8N122 1335 aa16.82■□□□□ 0.28
CHCHD2-201ENST00000395422 BTDP43251 543 aa16.82■□□□□ 0.28
CHCHD2-201ENST00000395422 C11orf49Q9H6J7 331 aa16.82■□□□□ 0.28
CHCHD2-201ENST00000395422 HMX1Q9NP08 348 aaPredicted RBP16.82■□□□□ 0.28
CHCHD2-201ENST00000395422 PTPRCP08575 1304 aa16.81■□□□□ 0.28
CHCHD2-201ENST00000395422 SEMA3EO15041 775 aa16.81■□□□□ 0.28
CHCHD2-201ENST00000395422 RHBDL3P58872 404 aa16.81■□□□□ 0.28
CHCHD2-201ENST00000395422 SPP2Q13103 211 aa16.81■□□□□ 0.28
CHCHD2-201ENST00000395422 RASGRF1Q13972 1273 aa16.81■□□□□ 0.28
CHCHD2-201ENST00000395422 RRP1BQ14684 758 aaKnown RBP16.81■□□□□ 0.28
CHCHD2-201ENST00000395422 PROCA1Q8NCQ7 364 aaPredicted RBP16.81■□□□□ 0.28
CHCHD2-201ENST00000395422 ZNF384Q8TF68 577 aa16.81■□□□□ 0.28
CHCHD2-201ENST00000395422 TRIB2Q92519 343 aa16.81■□□□□ 0.28
CHCHD2-201ENST00000395422 PNMA3Q9UL41 463 aa16.81■□□□□ 0.28
CHCHD2-201ENST00000395422 OGDHLQ9ULD0 1010 aa16.81■□□□□ 0.28
CHCHD2-201ENST00000395422 DOCK2Q92608 1830 aa16.81■□□□□ 0.28
CHCHD2-201ENST00000395422 AK9Q5TCS8 1911 aa16.8■□□□□ 0.28
CHCHD2-201ENST00000395422 PHIPQ8WWQ0 1821 aa16.8■□□□□ 0.28
CHCHD2-201ENST00000395422 TBC1D12O60347 775 aa16.8■□□□□ 0.28
CHCHD2-201ENST00000395422 PEX10O60683 326 aa16.8■□□□□ 0.28
CHCHD2-201ENST00000395422 CIAO1O76071 339 aa16.8■□□□□ 0.28
CHCHD2-201ENST00000395422 CCDC102BQ68D86 513 aa16.8■□□□□ 0.28
CHCHD2-201ENST00000395422 DZIP1Q86YF9 867 aaKnown RBP16.8■□□□□ 0.28
CHCHD2-201ENST00000395422 FAM163AQ96GL9 167 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms