RNA–Protein interactions for RNA: ENST00000395388.6

HLA-DRA-202, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DRA, Length 1,280 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-202ENST00000395388 DEFB129Q9H1M3 183 aa15.03■□□□□ -0
HLA-DRA-202ENST00000395388 ATP8A2Q9NTI2 1148 aa15.03■□□□□ -0
HLA-DRA-202ENST00000395388 PPP2R3BQ9Y5P8 575 aa15.03■□□□□ -0
HLA-DRA-202ENST00000395388 ADAMTSL1Q8N6G6 1762 aa15.03■□□□□ -0
HLA-DRA-202ENST00000395388 RAD50Q92878 1312 aa15.02■□□□□ -0
HLA-DRA-202ENST00000395388 ECM29Q5VYK3 1845 aa15.02■□□□□ -0
HLA-DRA-202ENST00000395388 WDHD1O75717 1129 aaPredicted RBP15.02■□□□□ -0
HLA-DRA-202ENST00000395388 TCP10Q12799 353 aa15.02■□□□□ -0
HLA-DRA-202ENST00000395388 RASA3Q14644 834 aa15.02■□□□□ -0
HLA-DRA-202ENST00000395388 MAPKAPK5Q8IW41 473 aa15.02■□□□□ -0
HLA-DRA-202ENST00000395388 RBM46Q8TBY0 533 aaKnown RBP15.02■□□□□ -0
HLA-DRA-202ENST00000395388 HOOK2Q96ED9 719 aa15.02■□□□□ -0
HLA-DRA-202ENST00000395388 RPAP1Q9BWH6 1393 aaPredicted RBP15.01□□□□□ -0.01
HLA-DRA-202ENST00000395388 CCDC171Q6TFL3 1326 aa15.01□□□□□ -0.01
HLA-DRA-202ENST00000395388 EIF5BO60841 1220 aaKnown RBP15.01□□□□□ -0.01
HLA-DRA-202ENST00000395388 POLR3DP05423 398 aaPredicted RBP15.01□□□□□ -0.01
HLA-DRA-202ENST00000395388 NF2P35240 595 aa15.01□□□□□ -0.01
HLA-DRA-202ENST00000395388 NFIAQ12857 509 aa15.01□□□□□ -0.01
HLA-DRA-202ENST00000395388 SUPT20HL1Q3ZLR7 823 aa15.01□□□□□ -0.01
HLA-DRA-202ENST00000395388 CCDC129Q6ZRS4 1044 aa15.01□□□□□ -0.01
HLA-DRA-202ENST00000395388 SDR42E1Q8WUS8 393 aa15.01□□□□□ -0.01
HLA-DRA-202ENST00000395388 DHX36Q9H2U1 1008 aaKnown RBP15.01□□□□□ -0.01
HLA-DRA-202ENST00000395388 FAM198AQ9UFP1 575 aa15.01□□□□□ -0.01
HLA-DRA-202ENST00000395388 POLR2AP24928 1970 aaKnown RBP15□□□□□ -0.01
HLA-DRA-202ENST00000395388 FLT1P17948 1338 aa15□□□□□ -0.01
HLA-DRA-202ENST00000395388 PRKAB2O43741 272 aa15□□□□□ -0.01
HLA-DRA-202ENST00000395388 TDO2P48775 406 aa15□□□□□ -0.01
HLA-DRA-202ENST00000395388 GIMAP6Q6P9H5 292 aa15□□□□□ -0.01
HLA-DRA-202ENST00000395388 TTC6Q86TZ1 520 aa15□□□□□ -0.01
HLA-DRA-202ENST00000395388 GLIS2Q9BZE0 524 aaPredicted RBP15□□□□□ -0.01
HLA-DRA-202ENST00000395388 OSBPL5Q9H0X9 879 aaPredicted RBP15□□□□□ -0.01
HLA-DRA-202ENST00000395388 MCM9Q9NXL9 1143 aa15□□□□□ -0.01
HLA-DRA-202ENST00000395388 SCAF8Q9UPN6 1271 aaKnown RBP15□□□□□ -0.01
HLA-DRA-202ENST00000395388 ADM5C9JUS6 153 aa14.99□□□□□ -0.01
HLA-DRA-202ENST00000395388 SGSM2O43147 1006 aa14.99□□□□□ -0.01
HLA-DRA-202ENST00000395388 HLA-DOAP06340 250 aa14.99□□□□□ -0.01
HLA-DRA-202ENST00000395388 FSTL1Q12841 308 aa14.99□□□□□ -0.01
HLA-DRA-202ENST00000395388 IFNL3Q8IZI9 196 aa14.99□□□□□ -0.01
HLA-DRA-202ENST00000395388 ESYT1Q9BSJ8 1104 aa14.99□□□□□ -0.01
HLA-DRA-202ENST00000395388 TRIM34Q9BYJ4 488 aa14.99□□□□□ -0.01
HLA-DRA-202ENST00000395388 TMEM39BQ9GZU3 492 aa14.99□□□□□ -0.01
HLA-DRA-202ENST00000395388 NAPBQ9H115 298 aa14.99□□□□□ -0.01
HLA-DRA-202ENST00000395388 DCP1AQ9NPI6 582 aaPredicted RBP14.99□□□□□ -0.01
HLA-DRA-202ENST00000395388 DDX4Q9NQI0 724 aaKnown RBP14.99□□□□□ -0.01
HLA-DRA-202ENST00000395388 GSG1L2A8MUP6 293 aa14.98□□□□□ -0.01
HLA-DRA-202ENST00000395388 HSPD1P10809 573 aaKnown RBP14.98□□□□□ -0.01
HLA-DRA-202ENST00000395388 ZNF589Q86UQ0 364 aaPredicted RBP14.98□□□□□ -0.01
HLA-DRA-202ENST00000395388 ZFPM1Q8IX07 1006 aa14.98□□□□□ -0.01
HLA-DRA-202ENST00000395388 CDCA5Q96FF9 252 aa14.98□□□□□ -0.01
HLA-DRA-202ENST00000395388 PI4KBQ9UBF8 816 aa14.98□□□□□ -0.01
HLA-DRA-202ENST00000395388 SAP30BPQ9UHR5 308 aaKnown RBP14.98□□□□□ -0.01
HLA-DRA-202ENST00000395388 CNTNAP1P78357 1384 aa14.98□□□□□ -0.01
HLA-DRA-202ENST00000395388 PRAMEF18Q5VWM3 479 aa14.97□□□□□ -0.01
HLA-DRA-202ENST00000395388 DCAF15Q66K64 600 aa14.97□□□□□ -0.01
HLA-DRA-202ENST00000395388 FOXP4Q8IVH2 680 aaPredicted RBP14.97□□□□□ -0.01
HLA-DRA-202ENST00000395388 CSRNP1Q96S65 589 aa14.97□□□□□ -0.01
HLA-DRA-202ENST00000395388 DSCC1Q9BVC3 393 aa14.97□□□□□ -0.01
HLA-DRA-202ENST00000395388 ANO2Q9NQ90 1003 aa14.97□□□□□ -0.01
HLA-DRA-202ENST00000395388 ARPP21Q9UBL0 812 aaPredicted RBP14.97□□□□□ -0.01
HLA-DRA-202ENST00000395388 CTNNA3Q9UI47 895 aa14.97□□□□□ -0.01
HLA-DRA-202ENST00000395388 PALD1Q9ULE6 856 aa14.97□□□□□ -0.01
HLA-DRA-202ENST00000395388 MINDY4BA8MYZ0 360 aa14.96□□□□□ -0.01
HLA-DRA-202ENST00000395388 USP17L12C9JPN9 530 aa14.96□□□□□ -0.01
HLA-DRA-202ENST00000395388 USP17L21D6R901 530 aa14.96□□□□□ -0.01
HLA-DRA-202ENST00000395388 REC8O95072 547 aa14.96□□□□□ -0.01
HLA-DRA-202ENST00000395388 SLC3A2P08195 630 aaKnown RBP14.96□□□□□ -0.01
HLA-DRA-202ENST00000395388 ALX1Q15699 326 aa14.96□□□□□ -0.01
HLA-DRA-202ENST00000395388 NBPF12Q5TAG4 269 aaPredicted RBP14.96□□□□□ -0.01
HLA-DRA-202ENST00000395388 CRACR2BQ8N4Y2 399 aaPredicted RBP14.96□□□□□ -0.01
HLA-DRA-202ENST00000395388 ZNF408Q9H9D4 720 aa14.96□□□□□ -0.01
HLA-DRA-202ENST00000395388 DDTLA6NHG4 134 aaPredicted RBP14.95□□□□□ -0.02
HLA-DRA-202ENST00000395388 TRAF5O00463 557 aa14.95□□□□□ -0.02
HLA-DRA-202ENST00000395388 PPP1R12BO60237 982 aaPredicted RBP14.95□□□□□ -0.02
HLA-DRA-202ENST00000395388 ITGBL1O95965 494 aaPredicted RBP14.95□□□□□ -0.02
HLA-DRA-202ENST00000395388 TTLL12Q14166 644 aaPredicted RBP14.95□□□□□ -0.02
HLA-DRA-202ENST00000395388 SBK1Q52WX2 424 aa14.95□□□□□ -0.02
HLA-DRA-202ENST00000395388 VPS53Q5VIR6 699 aa14.95□□□□□ -0.02
HLA-DRA-202ENST00000395388 CTR9Q6PD62 1173 aa14.95□□□□□ -0.02
HLA-DRA-202ENST00000395388 TEPSINQ96N21 525 aa14.95□□□□□ -0.02
HLA-DRA-202ENST00000395388 MKRN1Q9UHC7 482 aaKnown RBP14.95□□□□□ -0.02
HLA-DRA-202ENST00000395388 MYH1P12882 1939 aa14.94□□□□□ -0.02
HLA-DRA-202ENST00000395388 FGAP02671 866 aa14.94□□□□□ -0.02
HLA-DRA-202ENST00000395388 C12orf60Q5U649 245 aa14.94□□□□□ -0.02
HLA-DRA-202ENST00000395388 SH3BP5LQ7L8J4 393 aa14.94□□□□□ -0.02
HLA-DRA-202ENST00000395388 ARMC9Q7Z3E5 817 aa14.94□□□□□ -0.02
HLA-DRA-202ENST00000395388 C2orf69Q8N8R5 385 aa14.94□□□□□ -0.02
HLA-DRA-202ENST00000395388 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.94□□□□□ -0.02
HLA-DRA-202ENST00000395388 ZNF287Q9HBT7 754 aa14.94□□□□□ -0.02
HLA-DRA-202ENST00000395388 HERC5Q9UII4 1024 aaKnown RBP14.94□□□□□ -0.02
HLA-DRA-202ENST00000395388 TAOK2Q9UL54 1235 aa14.94□□□□□ -0.02
HLA-DRA-202ENST00000395388 U3KPZ7 1027 aaPredicted RBP14.94□□□□□ -0.02
HLA-DRA-202ENST00000395388 ATRNL1Q5VV63 1379 aa14.94□□□□□ -0.02
HLA-DRA-202ENST00000395388 COL2A1P02458 1487 aaPredicted RBP14.94□□□□□ -0.02
HLA-DRA-202ENST00000395388 FOCADQ5VW36 1801 aa14.94□□□□□ -0.02
HLA-DRA-202ENST00000395388 CDK5RAP2Q96SN8 1893 aa14.93□□□□□ -0.02
HLA-DRA-202ENST00000395388 ZNF213O14771 459 aa14.93□□□□□ -0.02
HLA-DRA-202ENST00000395388 TBC1D12O60347 775 aa14.93□□□□□ -0.02
HLA-DRA-202ENST00000395388 CELF2O95319 508 aaKnown RBP14.93□□□□□ -0.02
HLA-DRA-202ENST00000395388 PRKG1Q13976 671 aa14.93□□□□□ -0.02
HLA-DRA-202ENST00000395388 IMMTQ16891 758 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms