RNA–Protein interactions for RNA: ENST00000395154.7

STX1A-202, Transcript of syntaxin 1A, humanhuman

TSL 3 BASIC

Gene STX1A, Length 1,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-202ENST00000395154 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.35■□□□□ 0.375e-7■■■■■ 39.7
STX1A-202ENST00000395154 FANCIQ9NVI1 1328 aa17.35■□□□□ 0.37
STX1A-202ENST00000395154 VAMP4O75379 141 aa17.34■□□□□ 0.37
STX1A-202ENST00000395154 IFIT1P09914 478 aaKnown RBP17.34■□□□□ 0.37
STX1A-202ENST00000395154 TCP10Q12799 353 aa17.34■□□□□ 0.37
STX1A-202ENST00000395154 GADL1Q6ZQY3 521 aa17.34■□□□□ 0.37
STX1A-202ENST00000395154 SCYL3Q8IZE3 742 aa17.34■□□□□ 0.37
STX1A-202ENST00000395154 SRCIN1Q9C0H9 1055 aa17.34■□□□□ 0.37
STX1A-202ENST00000395154 NBPF3Q9H094 633 aa17.34■□□□□ 0.37
STX1A-202ENST00000395154 TAOK2Q9UL54 1235 aa17.34■□□□□ 0.37
STX1A-202ENST00000395154 ZHX2Q9Y6X8 837 aa17.34■□□□□ 0.37
STX1A-202ENST00000395154 MTMR10Q9NXD2 777 aa17.33■□□□□ 0.36
STX1A-202ENST00000395154 ZMYND8Q9ULU4 1186 aaPredicted RBP17.33■□□□□ 0.36
STX1A-202ENST00000395154 LAMA3Q16787 3333 aa17.32■□□□□ 0.36
STX1A-202ENST00000395154 HMGCRP04035 888 aa17.32■□□□□ 0.36
STX1A-202ENST00000395154 PTPRAP18433 802 aa17.32■□□□□ 0.36
STX1A-202ENST00000395154 PUM3Q15397 648 aaKnown RBP17.32■□□□□ 0.36
STX1A-202ENST00000395154 CDC42EP5Q6NZY7 148 aa17.32■□□□□ 0.36
STX1A-202ENST00000395154 Q7L0L9 218 aa17.32■□□□□ 0.36
STX1A-202ENST00000395154 VGLL2Q8N8G2 317 aa17.32■□□□□ 0.36
STX1A-202ENST00000395154 DIS3LQ8TF46 1054 aaKnown RBP17.32■□□□□ 0.36
STX1A-202ENST00000395154 PNMA3Q9UL41 463 aa17.32■□□□□ 0.36
STX1A-202ENST00000395154 DAGLAQ9Y4D2 1042 aa17.32■□□□□ 0.36
STX1A-202ENST00000395154 MAGEA10P43363 369 aaPredicted RBP17.31■□□□□ 0.36
STX1A-202ENST00000395154 SUCLG2Q96I99 432 aa17.31■□□□□ 0.36
STX1A-202ENST00000395154 UBE2OQ9C0C9 1292 aaKnown RBP17.31■□□□□ 0.36
STX1A-202ENST00000395154 AFG3L2Q9Y4W6 797 aa17.31■□□□□ 0.36
STX1A-202ENST00000395154 RPTORQ8N122 1335 aa17.3■□□□□ 0.36
STX1A-202ENST00000395154 NFIAQ12857 509 aa17.3■□□□□ 0.36
STX1A-202ENST00000395154 FAM110CQ1W6H9 321 aa17.3■□□□□ 0.36
STX1A-202ENST00000395154 RABL6Q3YEC7 729 aaPredicted RBP17.3■□□□□ 0.36
STX1A-202ENST00000395154 LRRC24Q50LG9 513 aa17.3■□□□□ 0.36
STX1A-202ENST00000395154 SLC4A10Q6U841 1118 aa17.3■□□□□ 0.36
STX1A-202ENST00000395154 COL25A1Q9BXS0 654 aaPredicted RBP17.3■□□□□ 0.36
STX1A-202ENST00000395154 C11orf49Q9H6J7 331 aa17.3■□□□□ 0.36
STX1A-202ENST00000395154 HMX1Q9NP08 348 aaPredicted RBP17.3■□□□□ 0.36
STX1A-202ENST00000395154 USP40Q9NVE5 1235 aa17.3■□□□□ 0.36
STX1A-202ENST00000395154 FAM198AQ9UFP1 575 aa17.3■□□□□ 0.36
STX1A-202ENST00000395154 AGTPBP1Q9UPW5 1226 aa17.3■□□□□ 0.36
STX1A-202ENST00000395154 LRRFIP2Q9Y608 721 aaKnown RBP17.3■□□□□ 0.36
STX1A-202ENST00000395154 PHF20L1A8MW92 1017 aa17.29■□□□□ 0.36
STX1A-202ENST00000395154 ENTPD3O75355 529 aa17.29■□□□□ 0.36
STX1A-202ENST00000395154 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.29■□□□□ 0.36
STX1A-202ENST00000395154 ANKRD13CQ8N6S4 541 aa17.29■□□□□ 0.36
STX1A-202ENST00000395154 KAZALD1Q96I82 304 aa17.29■□□□□ 0.36
STX1A-202ENST00000395154 MGAMO43451 1857 aa17.29■□□□□ 0.36
STX1A-202ENST00000395154 ATRNL1Q5VV63 1379 aa17.28■□□□□ 0.36
STX1A-202ENST00000395154 UTYO14607 1347 aa17.28■□□□□ 0.36
STX1A-202ENST00000395154 CACNA1FO60840 1977 aa17.28■□□□□ 0.36
STX1A-202ENST00000395154 CTNND1O60716 968 aaKnown RBP17.28■□□□□ 0.36
STX1A-202ENST00000395154 LDHBP07195 334 aaKnown RBP17.28■□□□□ 0.36
STX1A-202ENST00000395154 SLC5A1P13866 664 aa17.28■□□□□ 0.36
STX1A-202ENST00000395154 SYN1P17600 705 aa17.28■□□□□ 0.36
STX1A-202ENST00000395154 GCLCP48506 637 aaPredicted RBP17.28■□□□□ 0.36
STX1A-202ENST00000395154 EXOSC9Q06265 439 aaKnown RBP17.28■□□□□ 0.36
STX1A-202ENST00000395154 DIXDC1Q155Q3 683 aa17.28■□□□□ 0.36
STX1A-202ENST00000395154 BICC1Q9H694 974 aaKnown RBP17.28■□□□□ 0.36
STX1A-202ENST00000395154 TRIM75PA6NK02 468 aa17.27■□□□□ 0.36
STX1A-202ENST00000395154 NBPF7P0C2Y1 421 aaPredicted RBP17.27■□□□□ 0.36
STX1A-202ENST00000395154 FGFR2P21802 821 aa17.27■□□□□ 0.36
STX1A-202ENST00000395154 LPIN2Q92539 896 aa17.27■□□□□ 0.36
STX1A-202ENST00000395154 IDI2Q9BXS1 227 aa17.27■□□□□ 0.36
STX1A-202ENST00000395154 GNL3LQ9NVN8 582 aaKnown RBP17.27■□□□□ 0.36
STX1A-202ENST00000395154 MAP3K10Q02779 954 aa17.26■□□□□ 0.35
STX1A-202ENST00000395154 PABPC4Q13310 644 aaKnown RBP eCLIP17.26■□□□□ 0.35
STX1A-202ENST00000395154 FAM109BQ6ICB4 259 aaPredicted RBP17.26■□□□□ 0.35
STX1A-202ENST00000395154 ZSCAN29Q8IWY8 852 aaPredicted RBP17.26■□□□□ 0.35
STX1A-202ENST00000395154 PROCA1Q8NCQ7 364 aaPredicted RBP17.26■□□□□ 0.35
STX1A-202ENST00000395154 OGDHLQ9ULD0 1010 aa17.26■□□□□ 0.35
STX1A-202ENST00000395154 CT47B1P0C2W7 299 aaPredicted RBP17.25■□□□□ 0.35
STX1A-202ENST00000395154 PRDX5P30044 214 aa17.25■□□□□ 0.35
STX1A-202ENST00000395154 RGS3P49796 1198 aa17.25■□□□□ 0.35
STX1A-202ENST00000395154 SALL1Q9NSC2 1324 aa17.24■□□□□ 0.35
STX1A-202ENST00000395154 ANKRD44Q8N8A2 993 aa17.24■□□□□ 0.35
STX1A-202ENST00000395154 TBC1D2Q9BYX2 928 aa17.24■□□□□ 0.35
STX1A-202ENST00000395154 SEMA3EO15041 775 aa17.23■□□□□ 0.35
STX1A-202ENST00000395154 ZFPM1Q8IX07 1006 aa17.23■□□□□ 0.35
STX1A-202ENST00000395154 SLF2Q8IX21 1173 aa17.23■□□□□ 0.35
STX1A-202ENST00000395154 ZGPATQ8N5A5 531 aaKnown RBP17.23■□□□□ 0.35
STX1A-202ENST00000395154 ALPK3Q96L96 1907 aa17.22■□□□□ 0.35
STX1A-202ENST00000395154 TREML2Q5T2D2 321 aa17.22■□□□□ 0.35
STX1A-202ENST00000395154 TRMT44Q8IYL2 757 aaKnown RBP17.22■□□□□ 0.35
STX1A-202ENST00000395154 GJD2Q9UKL4 321 aa17.22■□□□□ 0.35
STX1A-202ENST00000395154 DENND2AQ9ULE3 1009 aa17.22■□□□□ 0.35
STX1A-202ENST00000395154 RFX7Q2KHR2 1363 aa17.21■□□□□ 0.35
STX1A-202ENST00000395154 EYA2O00167 538 aa17.21■□□□□ 0.35
STX1A-202ENST00000395154 KLHDC4Q8TBB5 520 aa17.21■□□□□ 0.35
STX1A-202ENST00000395154 DOCK2Q92608 1830 aa17.21■□□□□ 0.35
STX1A-202ENST00000395154 GAKO14976 1311 aa17.21■□□□□ 0.34
STX1A-202ENST00000395154 PFASO15067 1338 aa17.21■□□□□ 0.34
STX1A-202ENST00000395154 POTEB2H3BUK9 544 aa17.2■□□□□ 0.34
STX1A-202ENST00000395154 TBC1D12O60347 775 aa17.2■□□□□ 0.34
STX1A-202ENST00000395154 PRKAR2AP13861 404 aaKnown RBP17.2■□□□□ 0.34
STX1A-202ENST00000395154 MAP3K21Q5TCX8 1036 aa17.2■□□□□ 0.34
STX1A-202ENST00000395154 SOCS4Q8WXH5 440 aa17.2■□□□□ 0.34
STX1A-202ENST00000395154 DDX60LQ5H9U9 1706 aaKnown RBP17.2■□□□□ 0.34
STX1A-202ENST00000395154 DDTLA6NHG4 134 aaPredicted RBP17.19■□□□□ 0.34
STX1A-202ENST00000395154 CENPBP07199 599 aaPredicted RBP17.19■□□□□ 0.34
STX1A-202ENST00000395154 COL6A1P12109 1028 aa17.19■□□□□ 0.34
STX1A-202ENST00000395154 XRCC5P13010 732 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms