RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 SLURP2P0DP57 97 aa19.82■□□□□ 0.76
SNCA-205ENST00000394991 ZEB1P37275 1124 aaPredicted RBP19.82■□□□□ 0.76
SNCA-205ENST00000394991 FLT3LGP49771 235 aa19.82■□□□□ 0.76
SNCA-205ENST00000394991 ATG9AQ7Z3C6 839 aa19.82■□□□□ 0.76
SNCA-205ENST00000394991 CUL9Q8IWT3 2517 aa19.82■□□□□ 0.76
SNCA-205ENST00000394991 LOC285556D6RIA3 1793 aa19.81■□□□□ 0.76
SNCA-205ENST00000394991 PTPRAP18433 802 aa19.81■□□□□ 0.76
SNCA-205ENST00000394991 GADL1Q6ZQY3 521 aa19.81■□□□□ 0.76
SNCA-205ENST00000394991 SH3BP5LQ7L8J4 393 aa19.81■□□□□ 0.76
SNCA-205ENST00000394991 AFG3L2Q9Y4W6 797 aa19.81■□□□□ 0.76
SNCA-205ENST00000394991 ZHX2Q9Y6X8 837 aa19.81■□□□□ 0.76
SNCA-205ENST00000394991 COL6A3P12111 3177 aa19.8■□□□□ 0.76
SNCA-205ENST00000394991 LDHBP07195 334 aaKnown RBP19.8■□□□□ 0.76
SNCA-205ENST00000394991 RGS3P49796 1198 aa19.8■□□□□ 0.76
SNCA-205ENST00000394991 FASTKD5Q7L8L6 764 aaKnown RBP19.8■□□□□ 0.76
SNCA-205ENST00000394991 LRCH3Q96II8 777 aa19.8■□□□□ 0.76
SNCA-205ENST00000394991 DEFB118Q96PH6 123 aa19.8■□□□□ 0.76
SNCA-205ENST00000394991 SALL1Q9NSC2 1324 aa19.79■□□□□ 0.76
SNCA-205ENST00000394991 A0A1W2PPC1 479 aa19.79■□□□□ 0.76
SNCA-205ENST00000394991 IRF5Q13568 498 aa19.79■□□□□ 0.76
SNCA-205ENST00000394991 PXYLP1Q8TE99 480 aa19.79■□□□□ 0.76
SNCA-205ENST00000394991 PAK6Q9NQU5 681 aaPredicted RBP19.79■□□□□ 0.76
SNCA-205ENST00000394991 PICK1Q9NRD5 415 aa19.79■□□□□ 0.76
SNCA-205ENST00000394991 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.79■□□□□ 0.76
SNCA-205ENST00000394991 SLC45A1Q9Y2W3 748 aa19.79■□□□□ 0.76
SNCA-205ENST00000394991 PLXNB2O15031 1838 aa19.79■□□□□ 0.76
SNCA-205ENST00000394991 PTPRCP08575 1304 aa19.78■□□□□ 0.76
SNCA-205ENST00000394991 DLL1O00548 723 aa19.78■□□□□ 0.76
SNCA-205ENST00000394991 TNPO2O14787 897 aaKnown RBP19.78■□□□□ 0.76
SNCA-205ENST00000394991 EVI5O60447 810 aa19.78■□□□□ 0.76
SNCA-205ENST00000394991 SLC17A8Q8NDX2 589 aa19.78■□□□□ 0.76
SNCA-205ENST00000394991 IDI2Q9BXS1 227 aa19.78■□□□□ 0.76
SNCA-205ENST00000394991 CRISPLD2Q9H0B8 497 aa19.78■□□□□ 0.76
SNCA-205ENST00000394991 STAP2Q9UGK3 403 aa19.78■□□□□ 0.76
SNCA-205ENST00000394991 DDX60LQ5H9U9 1706 aaKnown RBP19.78■□□□□ 0.76
SNCA-205ENST00000394991 GAKO14976 1311 aa19.77■□□□□ 0.76
SNCA-205ENST00000394991 DDTLA6NHG4 134 aaPredicted RBP19.77■□□□□ 0.76
SNCA-205ENST00000394991 ENTPD3O75355 529 aa19.77■□□□□ 0.76
SNCA-205ENST00000394991 TFRCP02786 760 aaKnown RBP19.77■□□□□ 0.76
SNCA-205ENST00000394991 PHKA1P46020 1223 aa19.77■□□□□ 0.76
SNCA-205ENST00000394991 MAP3K10Q02779 954 aa19.77■□□□□ 0.76
SNCA-205ENST00000394991 ATP2B3Q16720 1220 aa19.77■□□□□ 0.76
SNCA-205ENST00000394991 CCDC84Q86UT8 332 aaPredicted RBP19.77■□□□□ 0.76
SNCA-205ENST00000394991 DIS3LQ8TF46 1054 aaKnown RBP19.77■□□□□ 0.76
SNCA-205ENST00000394991 ZNF521Q96K83 1311 aa19.76■□□□□ 0.75
SNCA-205ENST00000394991 SIL1Q9H173 461 aa19.76■□□□□ 0.75
SNCA-205ENST00000394991 DDX4Q9NQI0 724 aaKnown RBP19.76■□□□□ 0.75
SNCA-205ENST00000394991 TRIM75PA6NK02 468 aa19.75■□□□□ 0.75
SNCA-205ENST00000394991 ZSCAN29Q8IWY8 852 aaPredicted RBP19.75■□□□□ 0.75
SNCA-205ENST00000394991 SMCR8Q8TEV9 937 aaPredicted RBP19.75■□□□□ 0.75
SNCA-205ENST00000394991 PAWRQ96IZ0 340 aaKnown RBP19.75■□□□□ 0.75
SNCA-205ENST00000394991 TAOK2Q9UL54 1235 aa19.75■□□□□ 0.75
SNCA-205ENST00000394991 DENND2AQ9ULE3 1009 aa19.75■□□□□ 0.75
SNCA-205ENST00000394991 LRRFIP2Q9Y608 721 aaKnown RBP19.75■□□□□ 0.75
SNCA-205ENST00000394991 SEMA3EO15041 775 aa19.74■□□□□ 0.75
SNCA-205ENST00000394991 TREML2Q5T2D2 321 aa19.74■□□□□ 0.75
SNCA-205ENST00000394991 ANKRD13CQ8N6S4 541 aa19.74■□□□□ 0.75
SNCA-205ENST00000394991 SSH1Q8WYL5 1049 aa19.74■□□□□ 0.75
SNCA-205ENST00000394991 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.74■□□□□ 0.75
SNCA-205ENST00000394991 GNL3LQ9NVN8 582 aaKnown RBP19.74■□□□□ 0.75
SNCA-205ENST00000394991 AGTPBP1Q9UPW5 1226 aa19.74■□□□□ 0.75
SNCA-205ENST00000394991 CTNND1O60716 968 aaKnown RBP19.73■□□□□ 0.75
SNCA-205ENST00000394991 CIAO1O76071 339 aa19.73■□□□□ 0.75
SNCA-205ENST00000394991 CAPN2P17655 700 aa19.73■□□□□ 0.75
SNCA-205ENST00000394991 ADORA1P30542 326 aa19.73■□□□□ 0.75
SNCA-205ENST00000394991 CEP126Q9P2H0 1117 aa19.73■□□□□ 0.75
SNCA-205ENST00000394991 PICALMQ13492 652 aa19.72■□□□□ 0.75
SNCA-205ENST00000394991 COA7Q96BR5 231 aa19.72■□□□□ 0.75
SNCA-205ENST00000394991 GDF15Q99988 308 aa19.72■□□□□ 0.75
SNCA-205ENST00000394991 FBXO3Q9UK99 471 aa19.72■□□□□ 0.75
SNCA-205ENST00000394991 SIPA1L1O43166 1804 aa19.72■□□□□ 0.75
SNCA-205ENST00000394991 FAM196BA6NMK8 535 aa19.71■□□□□ 0.75
SNCA-205ENST00000394991 ZBTB22O15209 634 aa19.71■□□□□ 0.75
SNCA-205ENST00000394991 FAM110CQ1W6H9 321 aa19.71■□□□□ 0.75
SNCA-205ENST00000394991 CCDC102BQ68D86 513 aa19.71■□□□□ 0.75
SNCA-205ENST00000394991 NECAB2Q7Z6G3 386 aa19.71■□□□□ 0.75
SNCA-205ENST00000394991 BTDP43251 543 aa19.7■□□□□ 0.74
SNCA-205ENST00000394991 RASGRF1Q13972 1273 aa19.7■□□□□ 0.74
SNCA-205ENST00000394991 DZIP1Q86YF9 867 aaKnown RBP19.7■□□□□ 0.74
SNCA-205ENST00000394991 C7orf61Q8IZ16 206 aa19.7■□□□□ 0.74
SNCA-205ENST00000394991 FAM9BQ8IZU0 186 aa19.7■□□□□ 0.74
SNCA-205ENST00000394991 FAM163AQ96GL9 167 aaPredicted RBP19.7■□□□□ 0.74
SNCA-205ENST00000394991 ZMYND8Q9ULU4 1186 aaPredicted RBP19.7■□□□□ 0.74
SNCA-205ENST00000394991 PA2G4Q9UQ80 394 aaKnown RBP19.7■□□□□ 0.74
SNCA-205ENST00000394991 MROH7-TTC4A0A0A0MT08 1334 aa19.7■□□□□ 0.74
SNCA-205ENST00000394991 BMP8BP34820 402 aa19.69■□□□□ 0.74
SNCA-205ENST00000394991 MNX1P50219 401 aaPredicted RBP19.69■□□□□ 0.74
SNCA-205ENST00000394991 RHBDL3P58872 404 aa19.69■□□□□ 0.74
SNCA-205ENST00000394991 TRIM32Q13049 653 aa19.69■□□□□ 0.74
SNCA-205ENST00000394991 ZGPATQ8N5A5 531 aaKnown RBP19.69■□□□□ 0.74
SNCA-205ENST00000394991 ZNF384Q8TF68 577 aa19.69■□□□□ 0.74
SNCA-205ENST00000394991 ABCF2Q9UG63 623 aa19.69■□□□□ 0.74
SNCA-205ENST00000394991 PNMA3Q9UL41 463 aa19.69■□□□□ 0.74
SNCA-205ENST00000394991 A0A0C4DFX4 3053 aa19.69■□□□□ 0.74
SNCA-205ENST00000394991 CDK5RAP2Q96SN8 1893 aa19.69■□□□□ 0.74
SNCA-205ENST00000394991 ANP32CO43423 234 aa19.68■□□□□ 0.74
SNCA-205ENST00000394991 HMGCRP04035 888 aa19.68■□□□□ 0.74
SNCA-205ENST00000394991 IL15P40933 162 aaPredicted RBP19.68■□□□□ 0.74
SNCA-205ENST00000394991 ANKLE1Q8NAG6 615 aa19.68■□□□□ 0.74
SNCA-205ENST00000394991 PROCA1Q8NCQ7 364 aaPredicted RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms