RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 GPHNQ9NQX3 736 aaPredicted RBP11.52□□□□□ -0.56
UBE2D3-208ENST00000394803 CALCOCO1Q9P1Z2 691 aa11.52□□□□□ -0.56
UBE2D3-208ENST00000394803 SLC12A7Q9Y666 1083 aa11.52□□□□□ -0.56
UBE2D3-208ENST00000394803 ZNF335Q9H4Z2 1342 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-208ENST00000394803 FMNL1O95466 1100 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-208ENST00000394803 CDK11BP21127 795 aaKnown RBP11.52□□□□□ -0.57
UBE2D3-208ENST00000394803 CASQ1P31415 396 aa11.52□□□□□ -0.57
UBE2D3-208ENST00000394803 TMEM67Q5HYA8 995 aa11.52□□□□□ -0.57
UBE2D3-208ENST00000394803 NUTM2AQ8IVF1 878 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-208ENST00000394803 NOSTRINQ8IVI9 506 aa11.52□□□□□ -0.57
UBE2D3-208ENST00000394803 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.52□□□□□ -0.57
UBE2D3-208ENST00000394803 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.52□□□□□ -0.57
UBE2D3-208ENST00000394803 V9GYY5 206 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-208ENST00000394803 SPATA31A3Q5VYP0 1347 aa11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 ERICH2A1L162 156 aa11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 URI1O94763 535 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 IFNAR1P17181 557 aa11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 GNAT2P19087 354 aa11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 LDHAL6AQ6ZMR3 332 aa11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 GPR161Q8N6U8 529 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 ENOX1Q8TC92 643 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 SMARCE1Q969G3 411 aa11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 AIDAQ96BJ3 306 aa11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 BAG1Q99933 345 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 NAA15Q9BXJ9 866 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 FOXP1Q9H334 677 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 RIC1Q4ADV7 1423 aa11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 ECM29Q5VYK3 1845 aa11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 TIAM2Q8IVF5 1701 aa11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 PPFIA3O75145 1194 aa11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 STARD3NLO95772 234 aa11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 XBP1P17861 261 aa11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 ERCC5P28715 1186 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 PNOCQ13519 176 aa11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 POSTNQ15063 836 aa11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 NT5DC1Q5TFE4 455 aa11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 SPECC1LQ69YQ0 1117 aa11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 UTP14AQ9BVJ6 771 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 CNNM1Q9NRU3 951 aa11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 PPP2R2CQ9Y2T4 447 aa11.51□□□□□ -0.57
UBE2D3-208ENST00000394803 MYH3P11055 1940 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 POTEB2H3BUK9 544 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 BMP15O95972 392 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 IL2RBP14784 551 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 ARID4AP29374 1257 aaPredicted RBP11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 CLCN6P51797 869 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 MAP3K12Q12852 859 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 GPS2Q13227 327 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 CHRNA2Q15822 529 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 TOM1L2Q6ZVM7 507 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 METTL16Q86W50 562 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 MICU3Q86XE3 530 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 REXO1L1PQ8IX06 675 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 CTAGE1Q96RT6 745 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 NACAP1Q9BZK3 213 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 HSD3B7Q9H2F3 369 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 RNF41Q9H4P4 317 aaPredicted RBP11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 RIPOR2Q9Y4F9 1068 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 AKAP11Q9UKA4 1901 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 CHD4Q14839 1912 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 PATL2C9JE40 543 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 TADA3O75528 432 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 DEXIO95424 95 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 ATP1A3P13637 1013 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 MCAMP43121 646 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 TBX2Q13207 712 aaPredicted RBP11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 NTRK3Q16288 839 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 TRIM65Q6PJ69 517 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 CYB5R4Q7L1T6 521 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 TBC1D10CQ8IV04 446 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 IGDCC4Q8TDY8 1250 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 ARAP2Q8WZ64 1704 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 AK7Q96M32 723 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 NAPBQ9H115 298 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 LY9Q9HBG7 655 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 FANCLQ9NW38 375 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 PCDHA5Q9Y5H7 936 aa11.5□□□□□ -0.57
UBE2D3-208ENST00000394803 ANKRD36CQ5JPF3 1778 aa11.49□□□□□ -0.57
UBE2D3-208ENST00000394803 LRP6O75581 1613 aa11.49□□□□□ -0.57
UBE2D3-208ENST00000394803 IFIT3O14879 490 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-208ENST00000394803 IDH1O75874 414 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-208ENST00000394803 MMP1P03956 469 aa11.49□□□□□ -0.57
UBE2D3-208ENST00000394803 PNMA6AP0CW24 399 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-208ENST00000394803 PDE6AP16499 860 aa11.49□□□□□ -0.57
UBE2D3-208ENST00000394803 PTPREP23469 700 aa11.49□□□□□ -0.57
UBE2D3-208ENST00000394803 SCARF1Q14162 830 aa11.49□□□□□ -0.57
UBE2D3-208ENST00000394803 PYM1Q9BRP8 204 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-208ENST00000394803 SLC26A6Q9BXS9 759 aa11.49□□□□□ -0.57
UBE2D3-208ENST00000394803 TMOD3Q9NYL9 352 aa11.49□□□□□ -0.57
UBE2D3-208ENST00000394803 UBN2Q6ZU65 1347 aa11.49□□□□□ -0.57
UBE2D3-208ENST00000394803 MROH5Q6ZUA9 1318 aa11.49□□□□□ -0.57
UBE2D3-208ENST00000394803 ZNF532Q9HCE3 1301 aa11.49□□□□□ -0.57
UBE2D3-208ENST00000394803 B4E1Z4 1266 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 ITGA6P23229 1130 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 CTSWP56202 376 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 LONRF3Q496Y0 759 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 FILIP1LQ4L180 1135 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 GIGYF2Q6Y7W6 1299 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 RABGGTAQ92696 567 aa11.48□□□□□ -0.57
UBE2D3-208ENST00000394803 PANX2Q96RD6 677 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms