RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 ALG1Q9BT22 464 aa21.2■□□□□ 0.98
PCDHA1-202ENST00000394633 TUBE1Q9UJT0 475 aa21.2■□□□□ 0.98
PCDHA1-202ENST00000394633 HPSEQ9Y251 543 aa21.2■□□□□ 0.98
PCDHA1-202ENST00000394633 IGSF3O75054 1194 aa21.19■□□□□ 0.98
PCDHA1-202ENST00000394633 CSF1RP07333 972 aa21.19■□□□□ 0.98
PCDHA1-202ENST00000394633 ATP1A3P13637 1013 aa21.19■□□□□ 0.98
PCDHA1-202ENST00000394633 SYKP43405 635 aa21.19■□□□□ 0.98
PCDHA1-202ENST00000394633 FBXO38Q6PIJ6 1188 aa21.19■□□□□ 0.98
PCDHA1-202ENST00000394633 ANGEL1Q9UNK9 670 aaKnown RBP21.19■□□□□ 0.98
PCDHA1-202ENST00000394633 LY75O60449 1722 aa21.19■□□□□ 0.98
PCDHA1-202ENST00000394633 PCCAP05165 728 aaPredicted RBP21.19■□□□□ 0.98
PCDHA1-202ENST00000394633 GPTP24298 496 aa21.19■□□□□ 0.98
PCDHA1-202ENST00000394633 ZNF772Q68DY9 489 aaPredicted RBP21.19■□□□□ 0.98
PCDHA1-202ENST00000394633 SHC4Q6S5L8 630 aa21.19■□□□□ 0.98
PCDHA1-202ENST00000394633 GIGYF2Q6Y7W6 1299 aaKnown RBP21.19■□□□□ 0.98
PCDHA1-202ENST00000394633 KRT27Q7Z3Y8 459 aa21.19■□□□□ 0.98
PCDHA1-202ENST00000394633 VPS37DQ86XT2 251 aa21.19■□□□□ 0.98
PCDHA1-202ENST00000394633 PLA2G12BQ9BX93 195 aa21.19■□□□□ 0.98
PCDHA1-202ENST00000394633 L2HGDHQ9H9P8 463 aa21.19■□□□□ 0.98
PCDHA1-202ENST00000394633 ANKRD36CQ5JPF3 1778 aa21.18■□□□□ 0.98
PCDHA1-202ENST00000394633 KIF20AO95235 890 aa21.18■□□□□ 0.98
PCDHA1-202ENST00000394633 ADD2P35612 726 aa21.18■□□□□ 0.98
PCDHA1-202ENST00000394633 METAP2P50579 478 aaKnown RBP eCLIP21.18■□□□□ 0.98
PCDHA1-202ENST00000394633 IFIT5Q13325 482 aaKnown RBP21.18■□□□□ 0.98
PCDHA1-202ENST00000394633 PTPAQ15257 358 aa21.18■□□□□ 0.98
PCDHA1-202ENST00000394633 KRT40Q6A162 431 aa21.18■□□□□ 0.98
PCDHA1-202ENST00000394633 SYT10Q6XYQ8 523 aa21.18■□□□□ 0.98
PCDHA1-202ENST00000394633 CHD4Q14839 1912 aa21.17■□□□□ 0.98
PCDHA1-202ENST00000394633 SH2B2O14492 632 aaPredicted RBP21.17■□□□□ 0.98
PCDHA1-202ENST00000394633 PPP6R2O75170 966 aa21.17■□□□□ 0.98
PCDHA1-202ENST00000394633 RXRAP19793 462 aa21.17■□□□□ 0.98
PCDHA1-202ENST00000394633 TRDNQ13061 729 aa21.17■□□□□ 0.98
PCDHA1-202ENST00000394633 TRIM28Q13263 835 aaKnown RBP21.17■□□□□ 0.98
PCDHA1-202ENST00000394633 DHX8Q14562 1220 aaKnown RBP21.17■□□□□ 0.98
PCDHA1-202ENST00000394633 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.17■□□□□ 0.98
PCDHA1-202ENST00000394633 CDC27P30260 824 aa21.17■□□□□ 0.98
PCDHA1-202ENST00000394633 SENP2Q9HC62 589 aa21.17■□□□□ 0.98
PCDHA1-202ENST00000394633 MYH3P11055 1940 aa21.17■□□□□ 0.98
PCDHA1-202ENST00000394633 DPF2Q92785 391 aa21.16■□□□□ 0.98
PCDHA1-202ENST00000394633 MAP3K14Q99558 947 aa21.16■□□□□ 0.98
PCDHA1-202ENST00000394633 RIPOR2Q9Y4F9 1068 aa21.16■□□□□ 0.98
PCDHA1-202ENST00000394633 FAM237AA0A1B0GTK4 181 aa21.16■□□□□ 0.98
PCDHA1-202ENST00000394633 GABPB1Q06547 395 aaPredicted RBP21.16■□□□□ 0.98
PCDHA1-202ENST00000394633 PNOCQ13519 176 aa21.16■□□□□ 0.98
PCDHA1-202ENST00000394633 CCDC93Q567U6 631 aa21.16■□□□□ 0.98
PCDHA1-202ENST00000394633 METTL24Q5JXM2 366 aa21.16■□□□□ 0.98
PCDHA1-202ENST00000394633 APOA5Q6Q788 366 aa21.16■□□□□ 0.98
PCDHA1-202ENST00000394633 SYNE4Q8N205 404 aa21.16■□□□□ 0.98
PCDHA1-202ENST00000394633 PHKBQ93100 1093 aa21.16■□□□□ 0.98
PCDHA1-202ENST00000394633 FAM53CQ9NYF3 392 aa21.16■□□□□ 0.98
PCDHA1-202ENST00000394633 SLC9C2Q5TAH2 1124 aa21.15■□□□□ 0.98
PCDHA1-202ENST00000394633 ZBTB38Q8NAP3 1195 aaPredicted RBP21.15■□□□□ 0.98
PCDHA1-202ENST00000394633 LRRN4CLQ8ND94 238 aa21.15■□□□□ 0.98
PCDHA1-202ENST00000394633 RGS17Q9UGC6 210 aaPredicted RBP21.15■□□□□ 0.98
PCDHA1-202ENST00000394633 CCNL1Q9UK58 526 aaPredicted RBP21.15■□□□□ 0.98
PCDHA1-202ENST00000394633 TAF1LQ8IZX4 1826 aa21.15■□□□□ 0.98
PCDHA1-202ENST00000394633 NRDCO43847 1150 aa21.14■□□□□ 0.98
PCDHA1-202ENST00000394633 CDKL5O76039 1030 aa21.14■□□□□ 0.98
PCDHA1-202ENST00000394633 RESP18Q5W5W9 173 aa21.14■□□□□ 0.98
PCDHA1-202ENST00000394633 AMIGO3Q86WK7 504 aa21.14■□□□□ 0.98
PCDHA1-202ENST00000394633 CLIC6Q96NY7 704 aa21.14■□□□□ 0.98
PCDHA1-202ENST00000394633 PIH1D3Q9NQM4 214 aaKnown RBP21.14■□□□□ 0.98
PCDHA1-202ENST00000394633 TAOK2Q9UL54 1235 aa21.14■□□□□ 0.98
PCDHA1-202ENST00000394633 UBN2Q6ZU65 1347 aa21.14■□□□□ 0.97
PCDHA1-202ENST00000394633 B4E1Z4 1266 aa21.14■□□□□ 0.97
PCDHA1-202ENST00000394633 MYL5Q02045 173 aa21.14■□□□□ 0.97
PCDHA1-202ENST00000394633 JMYQ8N9B5 988 aa21.14■□□□□ 0.97
PCDHA1-202ENST00000394633 TRIM37O94972 964 aa21.13■□□□□ 0.97
PCDHA1-202ENST00000394633 UBASH3AP57075 661 aa21.13■□□□□ 0.97
PCDHA1-202ENST00000394633 NTRK3Q16288 839 aa21.13■□□□□ 0.97
PCDHA1-202ENST00000394633 MICU3Q86XE3 530 aa21.13■□□□□ 0.97
PCDHA1-202ENST00000394633 NLRP10Q86W26 655 aa21.13■□□□□ 0.97
PCDHA1-202ENST00000394633 METTL16Q86W50 562 aaKnown RBP21.13■□□□□ 0.97
PCDHA1-202ENST00000394633 KRT222Q8N1A0 295 aa21.13■□□□□ 0.97
PCDHA1-202ENST00000394633 NPHP1O15259 732 aa21.12■□□□□ 0.97
PCDHA1-202ENST00000394633 RANBP6O60518 1105 aaKnown RBP21.12■□□□□ 0.97
PCDHA1-202ENST00000394633 CAMTA2O94983 1202 aa21.12■□□□□ 0.97
PCDHA1-202ENST00000394633 APPP05067 770 aa21.12■□□□□ 0.97
PCDHA1-202ENST00000394633 GNL2Q13823 731 aaKnown RBP21.12■□□□□ 0.97
PCDHA1-202ENST00000394633 ERCC6LQ2NKX8 1250 aa21.12■□□□□ 0.97
PCDHA1-202ENST00000394633 LDHAL6AQ6ZMR3 332 aa21.12■□□□□ 0.97
PCDHA1-202ENST00000394633 FAM196AQ6ZSG2 479 aa21.12■□□□□ 0.97
PCDHA1-202ENST00000394633 IGDCC4Q8TDY8 1250 aa21.12■□□□□ 0.97
PCDHA1-202ENST00000394633 GREM2Q9H772 168 aa21.12■□□□□ 0.97
PCDHA1-202ENST00000394633 ERVV-1B6SEH8 477 aa21.12■□□□□ 0.97
PCDHA1-202ENST00000394633 TUBB4AP04350 444 aa21.12■□□□□ 0.97
PCDHA1-202ENST00000394633 ITGA6P23229 1130 aa21.12■□□□□ 0.97
PCDHA1-202ENST00000394633 CPLX2Q6PUV4 134 aaKnown RBP21.12■□□□□ 0.97
PCDHA1-202ENST00000394633 FBXO41Q8TF61 875 aa21.12■□□□□ 0.97
PCDHA1-202ENST00000394633 ZNF512BQ96KM6 892 aaPredicted RBP21.12■□□□□ 0.97
PCDHA1-202ENST00000394633 LRRC4BQ9NT99 713 aa21.12■□□□□ 0.97
PCDHA1-202ENST00000394633 FAM217BQ9NTX9 383 aaPredicted RBP21.12■□□□□ 0.97
PCDHA1-202ENST00000394633 ZNF446Q9NWS9 450 aa21.12■□□□□ 0.97
PCDHA1-202ENST00000394633 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.12■□□□□ 0.97
PCDHA1-202ENST00000394633 ZNF532Q9HCE3 1301 aa21.11■□□□□ 0.97
PCDHA1-202ENST00000394633 ZBTB43O43298 467 aa21.11■□□□□ 0.97
PCDHA1-202ENST00000394633 CBFA2T2O43439 604 aa21.11■□□□□ 0.97
PCDHA1-202ENST00000394633 IDH1O75874 414 aaKnown RBP21.11■□□□□ 0.97
PCDHA1-202ENST00000394633 SERPINC1P01008 464 aa21.11■□□□□ 0.97
PCDHA1-202ENST00000394633 SLFN14P0C7P3 912 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms