RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 MRPS27Q92552 414 aaKnown RBP17.97■□□□□ 0.47
PTBP1-204ENST00000394601 CCDC34Q96HJ3 373 aa17.97■□□□□ 0.47
PTBP1-204ENST00000394601 EPC1Q9H2F5 836 aa17.97■□□□□ 0.47
PTBP1-204ENST00000394601 MROH7-TTC4A0A0A0MT08 1334 aa17.97■□□□□ 0.47
PTBP1-204ENST00000394601 BECN2A8MW95 431 aa17.97■□□□□ 0.47
PTBP1-204ENST00000394601 RANBP6O60518 1105 aaKnown RBP17.97■□□□□ 0.47
PTBP1-204ENST00000394601 NID2Q14112 1375 aa17.97■□□□□ 0.47
PTBP1-204ENST00000394601 UBE2Q2LH0YL09 131 aa17.97■□□□□ 0.47
PTBP1-204ENST00000394601 WDHD1O75717 1129 aaPredicted RBP17.97■□□□□ 0.47
PTBP1-204ENST00000394601 SKILP12757 684 aa17.97■□□□□ 0.47
PTBP1-204ENST00000394601 APOA5Q6Q788 366 aa17.97■□□□□ 0.47
PTBP1-204ENST00000394601 BRAPQ7Z569 592 aa17.97■□□□□ 0.47
PTBP1-204ENST00000394601 RSPH14Q9UHP6 348 aa17.97■□□□□ 0.47
PTBP1-204ENST00000394601 SGMS1Q86VZ5 419 aa17.96■□□□□ 0.47
PTBP1-204ENST00000394601 SPATA5Q8NB90 893 aa17.96■□□□□ 0.47
PTBP1-204ENST00000394601 SEC31BQ9NQW1 1179 aa17.96■□□□□ 0.47
PTBP1-204ENST00000394601 ANKRD65E5RJM6 399 aa17.96■□□□□ 0.47
PTBP1-204ENST00000394601 DHX16O60231 1041 aaKnown RBP17.96■□□□□ 0.47
PTBP1-204ENST00000394601 IDH1O75874 414 aaKnown RBP17.96■□□□□ 0.47
PTBP1-204ENST00000394601 MRFAP1L1Q96HT8 127 aa17.96■□□□□ 0.47
PTBP1-204ENST00000394601 MAP3K14Q99558 947 aa17.96■□□□□ 0.47
PTBP1-204ENST00000394601 RALYLQ86SE5 291 aaKnown RBP17.95■□□□□ 0.46
PTBP1-204ENST00000394601 ZNF397Q8NF99 534 aaPredicted RBP17.95■□□□□ 0.46
PTBP1-204ENST00000394601 B4E1Z4 1266 aa17.95■□□□□ 0.46
PTBP1-204ENST00000394601 TRIM66O15016 1216 aa17.95■□□□□ 0.46
PTBP1-204ENST00000394601 CAMTA2O94983 1202 aa17.95■□□□□ 0.46
PTBP1-204ENST00000394601 PTPAQ15257 358 aa17.95■□□□□ 0.46
PTBP1-204ENST00000394601 CCDC73Q6ZRK6 1079 aa17.95■□□□□ 0.46
PTBP1-204ENST00000394601 LRRN4CLQ8ND94 238 aa17.95■□□□□ 0.46
PTBP1-204ENST00000394601 TAF1P21675 1872 aa17.95■□□□□ 0.46
PTBP1-204ENST00000394601 RXRAP19793 462 aa17.95■□□□□ 0.46
PTBP1-204ENST00000394601 RBM6P78332 1123 aaKnown RBP17.95■□□□□ 0.46
PTBP1-204ENST00000394601 PTPN21Q16825 1174 aa17.95■□□□□ 0.46
PTBP1-204ENST00000394601 NBPF11Q86T75 865 aa17.95■□□□□ 0.46
PTBP1-204ENST00000394601 GSG1L2A8MUP6 293 aa17.94■□□□□ 0.46
PTBP1-204ENST00000394601 EXOC5O00471 708 aa17.94■□□□□ 0.46
PTBP1-204ENST00000394601 SPTLC2O15270 562 aa17.94■□□□□ 0.46
PTBP1-204ENST00000394601 KINO60870 393 aaKnown RBP17.94■□□□□ 0.46
PTBP1-204ENST00000394601 UQCRFS1P1P0C7P4 283 aa17.94■□□□□ 0.46
PTBP1-204ENST00000394601 KCNG4Q8TDN1 519 aa17.94■□□□□ 0.46
PTBP1-204ENST00000394601 CACNA1SQ13698 1873 aa17.94■□□□□ 0.46
PTBP1-204ENST00000394601 RTL9Q8NET4 1388 aa17.94■□□□□ 0.46
PTBP1-204ENST00000394601 IFNL3Q8IZI9 196 aa17.94■□□□□ 0.46
PTBP1-204ENST00000394601 PATL2C9JE40 543 aaKnown RBP17.93■□□□□ 0.46
PTBP1-204ENST00000394601 ITPK1Q13572 414 aa17.93■□□□□ 0.46
PTBP1-204ENST00000394601 ANO1Q5XXA6 986 aa17.93■□□□□ 0.46
PTBP1-204ENST00000394601 KIAA1468Q9P260 1216 aa17.93■□□□□ 0.46
PTBP1-204ENST00000394601 HPSEQ9Y251 543 aa17.93■□□□□ 0.46
PTBP1-204ENST00000394601 SEC31AO94979 1220 aaKnown RBP17.93■□□□□ 0.46
PTBP1-204ENST00000394601 KRBA2Q6ZNG9 492 aa17.93■□□□□ 0.46
PTBP1-204ENST00000394601 PHKBQ93100 1093 aa17.93■□□□□ 0.46
PTBP1-204ENST00000394601 HSD3B7Q9H2F3 369 aa17.93■□□□□ 0.46
PTBP1-204ENST00000394601 ZSWIM5Q9P217 1185 aa17.93■□□□□ 0.46
PTBP1-204ENST00000394601 FAM237AA0A1B0GTK4 181 aa17.93■□□□□ 0.46
PTBP1-204ENST00000394601 NTSR2O95665 410 aa17.93■□□□□ 0.46
PTBP1-204ENST00000394601 SLC39A14Q15043 492 aa17.93■□□□□ 0.46
PTBP1-204ENST00000394601 DPCR1Q3MIW9 517 aa17.93■□□□□ 0.46
PTBP1-204ENST00000394601 SYT10Q6XYQ8 523 aa17.93■□□□□ 0.46
PTBP1-204ENST00000394601 BPIFA3Q9BQP9 254 aa17.93■□□□□ 0.46
PTBP1-204ENST00000394601 METAP2P50579 478 aaKnown RBP eCLIP17.92■□□□□ 0.463e-8■■□□□ 14.5
PTBP1-204ENST00000394601 ANO10Q9NW15 660 aa17.92■□□□□ 0.46
PTBP1-204ENST00000394601 MORC2Q9Y6X9 1032 aaPredicted RBP17.92■□□□□ 0.46
PTBP1-204ENST00000394601 COL1A1P02452 1464 aaPredicted RBP17.92■□□□□ 0.46
PTBP1-204ENST00000394601 CRKLP46109 303 aaKnown RBP17.92■□□□□ 0.46
PTBP1-204ENST00000394601 RAD51AP2Q09MP3 1159 aa17.92■□□□□ 0.46
PTBP1-204ENST00000394601 ARHGAP29Q52LW3 1261 aa17.92■□□□□ 0.46
PTBP1-204ENST00000394601 LRRC8AQ8IWT6 810 aa17.92■□□□□ 0.46
PTBP1-204ENST00000394601 MAGEB6Q8N7X4 407 aa17.92■□□□□ 0.46
PTBP1-204ENST00000394601 TMEM87BQ96K49 555 aa17.92■□□□□ 0.46
PTBP1-204ENST00000394601 ZNF831Q5JPB2 1677 aa17.92■□□□□ 0.46
PTBP1-204ENST00000394601 PRKAB2O43741 272 aa17.91■□□□□ 0.46
PTBP1-204ENST00000394601 CMA1P23946 247 aa17.91■□□□□ 0.46
PTBP1-204ENST00000394601 LIFRP42702 1097 aa17.91■□□□□ 0.46
PTBP1-204ENST00000394601 CTDSPL2Q05D32 466 aa17.91■□□□□ 0.46
PTBP1-204ENST00000394601 NCAPHQ15003 741 aa17.91■□□□□ 0.46
PTBP1-204ENST00000394601 KRT40Q6A162 431 aa17.91■□□□□ 0.46
PTBP1-204ENST00000394601 VPS37DQ86XT2 251 aa17.91■□□□□ 0.46
PTBP1-204ENST00000394601 GPATCH11Q8N954 259 aa17.91■□□□□ 0.46
PTBP1-204ENST00000394601 ZSWIM4Q9H7M6 989 aa17.91■□□□□ 0.46
PTBP1-204ENST00000394601 SCN7AQ01118 1682 aa17.91■□□□□ 0.46
PTBP1-204ENST00000394601 PAXBP1Q9Y5B6 917 aa17.91■□□□□ 0.46
PTBP1-204ENST00000394601 SPATA31A1Q5TZJ5 1347 aa17.91■□□□□ 0.46
PTBP1-204ENST00000394601 ZNF202O95125 648 aa17.91■□□□□ 0.46
PTBP1-204ENST00000394601 PFKFB1P16118 471 aa17.91■□□□□ 0.46
PTBP1-204ENST00000394601 SHC4Q6S5L8 630 aa17.91■□□□□ 0.46
PTBP1-204ENST00000394601 ADGRA1Q86SQ6 560 aa17.91■□□□□ 0.46
PTBP1-204ENST00000394601 ALG1Q9BT22 464 aa17.91■□□□□ 0.46
PTBP1-204ENST00000394601 MYL10Q9BUA6 226 aa17.91■□□□□ 0.46
PTBP1-204ENST00000394601 ARMT1Q9H993 441 aa17.91■□□□□ 0.46
PTBP1-204ENST00000394601 CPLX1O14810 134 aa17.9■□□□□ 0.46
PTBP1-204ENST00000394601 MBD4O95243 580 aa17.9■□□□□ 0.46
PTBP1-204ENST00000394601 BCAMP50895 628 aa17.9■□□□□ 0.46
PTBP1-204ENST00000394601 STK38Q15208 465 aa17.9■□□□□ 0.46
PTBP1-204ENST00000394601 LCORLQ8N3X6 602 aa17.9■□□□□ 0.46
PTBP1-204ENST00000394601 CCDC87Q9NVE4 849 aa17.9■□□□□ 0.46
PTBP1-204ENST00000394601 PNPLA7Q6ZV29 1317 aa17.9■□□□□ 0.46
PTBP1-204ENST00000394601 ISM2Q6H9L7 571 aa17.9■□□□□ 0.46
PTBP1-204ENST00000394601 AOPEPQ8N6M6 819 aa17.9■□□□□ 0.46
PTBP1-204ENST00000394601 AIDAQ96BJ3 306 aa17.9■□□□□ 0.46
PTBP1-204ENST00000394601 CCDC69A6NI79 296 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms