RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 RNF41Q9H4P4 317 aaPredicted RBP24■■□□□ 1.43
HDDC3-202ENST00000394272 SPON1Q9HCB6 807 aa24■■□□□ 1.43
HDDC3-202ENST00000394272 ARPP21Q9UBL0 812 aaPredicted RBP24■■□□□ 1.43
HDDC3-202ENST00000394272 ARFGEF1Q9Y6D6 1849 aa24■■□□□ 1.43
HDDC3-202ENST00000394272 DDX60LQ5H9U9 1706 aaKnown RBP23.99■■□□□ 1.43
HDDC3-202ENST00000394272 B4E1Z4 1266 aa23.99■■□□□ 1.43
HDDC3-202ENST00000394272 SMIM22K7EJ46 135 aa23.99■■□□□ 1.43
HDDC3-202ENST00000394272 FGD1P98174 961 aa23.99■■□□□ 1.43
HDDC3-202ENST00000394272 LARGE2Q8N3Y3 721 aa23.99■■□□□ 1.43
HDDC3-202ENST00000394272 CYP2D7A0A087X1C5 515 aa23.98■■□□□ 1.43
HDDC3-202ENST00000394272 HHIPL2Q6UWX4 724 aa23.98■■□□□ 1.43
HDDC3-202ENST00000394272 CYB5R4Q7L1T6 521 aa23.98■■□□□ 1.43
HDDC3-202ENST00000394272 MRIQ9BWK5 157 aa23.98■■□□□ 1.43
HDDC3-202ENST00000394272 KRT23Q9C075 422 aa23.98■■□□□ 1.43
HDDC3-202ENST00000394272 FGRP09769 529 aa23.98■■□□□ 1.43
HDDC3-202ENST00000394272 USP5P45974 858 aa23.98■■□□□ 1.43
HDDC3-202ENST00000394272 IARSP41252 1262 aaKnown RBP23.97■■□□□ 1.43
HDDC3-202ENST00000394272 EVCP57679 992 aa23.97■■□□□ 1.43
HDDC3-202ENST00000394272 CCDC83Q8IWF9 413 aa23.97■■□□□ 1.43
HDDC3-202ENST00000394272 NLGN2Q8NFZ4 835 aa23.97■■□□□ 1.43
HDDC3-202ENST00000394272 TGFBRAP1Q8WUH2 860 aa23.97■■□□□ 1.43
HDDC3-202ENST00000394272 TAOK3Q9H2K8 898 aa23.97■■□□□ 1.43
HDDC3-202ENST00000394272 PCP11498 1178 aaKnown RBP23.96■■□□□ 1.43
HDDC3-202ENST00000394272 SCNN1DP51172 638 aa23.96■■□□□ 1.43
HDDC3-202ENST00000394272 TEX11Q8IYF3 940 aa23.96■■□□□ 1.43
HDDC3-202ENST00000394272 NECAB1Q8N987 351 aa23.96■■□□□ 1.43
HDDC3-202ENST00000394272 TEKT1Q969V4 418 aa23.96■■□□□ 1.43
HDDC3-202ENST00000394272 MCM9Q9NXL9 1143 aa23.96■■□□□ 1.43
HDDC3-202ENST00000394272 BCS1LQ9Y276 419 aa23.96■■□□□ 1.43
HDDC3-202ENST00000394272 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.96■■□□□ 1.43
HDDC3-202ENST00000394272 ECM29Q5VYK3 1845 aa23.96■■□□□ 1.43
HDDC3-202ENST00000394272 NFKBIEO00221 500 aa23.96■■□□□ 1.43
HDDC3-202ENST00000394272 HDLBPQ00341 1268 aaKnown RBP23.96■■□□□ 1.43
HDDC3-202ENST00000394272 KIAA0825Q8IV33 1275 aa23.96■■□□□ 1.43
HDDC3-202ENST00000394272 GPHNQ9NQX3 736 aaPredicted RBP23.96■■□□□ 1.43
HDDC3-202ENST00000394272 ZSWIM5Q9P217 1185 aa23.96■■□□□ 1.43
HDDC3-202ENST00000394272 MYH1P12882 1939 aa23.96■■□□□ 1.43
HDDC3-202ENST00000394272 KDM4AO75164 1064 aa23.95■■□□□ 1.42
HDDC3-202ENST00000394272 USP17L8P0C7I0 530 aa23.95■■□□□ 1.42
HDDC3-202ENST00000394272 EVX2Q03828 476 aa23.95■■□□□ 1.42
HDDC3-202ENST00000394272 APOBRQ0VD83 1088 aa23.95■■□□□ 1.42
HDDC3-202ENST00000394272 CYP2D6P10635 497 aa23.94■■□□□ 1.42
HDDC3-202ENST00000394272 CRKP46108 304 aa23.94■■□□□ 1.42
HDDC3-202ENST00000394272 C12orf60Q5U649 245 aa23.94■■□□□ 1.42
HDDC3-202ENST00000394272 APOBEC3HQ6NTF7 200 aaKnown RBP23.94■■□□□ 1.42
HDDC3-202ENST00000394272 GTF3C6Q969F1 213 aa23.94■■□□□ 1.42
HDDC3-202ENST00000394272 TMEM87BQ96K49 555 aa23.94■■□□□ 1.42
HDDC3-202ENST00000394272 ZDHHC15Q96MV8 337 aa23.94■■□□□ 1.42
HDDC3-202ENST00000394272 MAPKAPK5Q8IW41 473 aa23.94■■□□□ 1.42
HDDC3-202ENST00000394272 STK11IPQ8N1F8 1099 aa23.94■■□□□ 1.42
HDDC3-202ENST00000394272 ZNF274Q96GC6 653 aaPredicted RBP23.94■■□□□ 1.42
HDDC3-202ENST00000394272 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.94■■□□□ 1.42
HDDC3-202ENST00000394272 FLT1P17948 1338 aa23.94■■□□□ 1.42
HDDC3-202ENST00000394272 SH2B2O14492 632 aaPredicted RBP23.93■■□□□ 1.42
HDDC3-202ENST00000394272 RAB3GAP1Q15042 981 aa23.93■■□□□ 1.42
HDDC3-202ENST00000394272 IGDCC4Q8TDY8 1250 aa23.93■■□□□ 1.42
HDDC3-202ENST00000394272 ROBO3Q96MS0 1386 aa23.93■■□□□ 1.42
HDDC3-202ENST00000394272 LTBP3Q9NS15 1303 aa23.93■■□□□ 1.42
HDDC3-202ENST00000394272 ZNRF3Q9ULT6 936 aa23.93■■□□□ 1.42
HDDC3-202ENST00000394272 ANGEL1Q9UNK9 670 aaKnown RBP23.93■■□□□ 1.42
HDDC3-202ENST00000394272 MYO3BQ8WXR4 1341 aa23.92■■□□□ 1.42
HDDC3-202ENST00000394272 PFKFB2O60825 505 aa23.92■■□□□ 1.42
HDDC3-202ENST00000394272 VIL1P09327 827 aaKnown RBP23.92■■□□□ 1.42
HDDC3-202ENST00000394272 STK3Q13188 491 aa23.92■■□□□ 1.42
HDDC3-202ENST00000394272 RRP12Q5JTH9 1297 aaKnown RBP23.92■■□□□ 1.42
HDDC3-202ENST00000394272 NIM1KQ8IY84 436 aa23.92■■□□□ 1.42
HDDC3-202ENST00000394272 MTA3Q9BTC8 594 aa23.92■■□□□ 1.42
HDDC3-202ENST00000394272 RSBN1LQ6PCB5 846 aaPredicted RBP23.92■■□□□ 1.42
HDDC3-202ENST00000394272 TOMM22Q9NS69 142 aa23.92■■□□□ 1.42
HDDC3-202ENST00000394272 SERPINA10Q9UK55 444 aa23.92■■□□□ 1.42
HDDC3-202ENST00000394272 PSMD14O00487 310 aa23.91■■□□□ 1.42
HDDC3-202ENST00000394272 ORC4O43929 436 aa23.91■■□□□ 1.42
HDDC3-202ENST00000394272 SLC3A2P08195 630 aaKnown RBP23.91■■□□□ 1.42
HDDC3-202ENST00000394272 PDIA3P30101 505 aaKnown RBP23.91■■□□□ 1.42
HDDC3-202ENST00000394272 NUCB2P80303 420 aa23.91■■□□□ 1.42
HDDC3-202ENST00000394272 SCRN1Q12765 414 aa23.91■■□□□ 1.42
HDDC3-202ENST00000394272 ESR2Q92731 530 aa23.91■■□□□ 1.42
HDDC3-202ENST00000394272 BRPF3Q9ULD4 1205 aa23.91■■□□□ 1.42
HDDC3-202ENST00000394272 WDHD1O75717 1129 aaPredicted RBP23.9■■□□□ 1.42
HDDC3-202ENST00000394272 RAD17O75943 681 aa23.9■■□□□ 1.42
HDDC3-202ENST00000394272 PKP1Q13835 747 aa23.9■■□□□ 1.42
HDDC3-202ENST00000394272 CDC42EP5Q6NZY7 148 aa23.9■■□□□ 1.42
HDDC3-202ENST00000394272 GMLQ99445 158 aa23.9■■□□□ 1.42
HDDC3-202ENST00000394272 SMC3Q9UQE7 1217 aa23.9■■□□□ 1.42
HDDC3-202ENST00000394272 AMOTL1Q8IY63 956 aa23.9■■□□□ 1.42
HDDC3-202ENST00000394272 LY9Q9HBG7 655 aa23.9■■□□□ 1.42
HDDC3-202ENST00000394272 USP40Q9NVE5 1235 aa23.9■■□□□ 1.42
HDDC3-202ENST00000394272 LIFRP42702 1097 aa23.89■■□□□ 1.41
HDDC3-202ENST00000394272 SGMS1Q86VZ5 419 aa23.89■■□□□ 1.41
HDDC3-202ENST00000394272 KLF18A0A0U1RQI7 1052 aa23.88■■□□□ 1.41
HDDC3-202ENST00000394272 PLCD1P51178 756 aa23.88■■□□□ 1.41
HDDC3-202ENST00000394272 PDE4BQ07343 736 aa23.88■■□□□ 1.41
HDDC3-202ENST00000394272 TMEM67Q5HYA8 995 aa23.88■■□□□ 1.41
HDDC3-202ENST00000394272 SAP30BPQ9UHR5 308 aaKnown RBP23.88■■□□□ 1.41
HDDC3-202ENST00000394272 PCDHAC2Q9Y5I4 1007 aa23.88■■□□□ 1.41
HDDC3-202ENST00000394272 UTRNP46939 3433 aa23.88■■□□□ 1.41
HDDC3-202ENST00000394272 IFIT3O14879 490 aaKnown RBP23.87■■□□□ 1.41
HDDC3-202ENST00000394272 PRDM1O75626 825 aa23.87■■□□□ 1.41
HDDC3-202ENST00000394272 POLR3DP05423 398 aaPredicted RBP23.87■■□□□ 1.41
HDDC3-202ENST00000394272 SLC4A8Q2Y0W8 1093 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms