RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 BOLA2Q9H3K6 86 aa14.87□□□□□ -0.03
USP49-203ENST00000394253 ANLNQ9NQW6 1124 aa14.87□□□□□ -0.03
USP49-203ENST00000394253 TSPY2A6NKD2 308 aa14.87□□□□□ -0.03
USP49-203ENST00000394253 MYRIPQ8NFW9 859 aa14.87□□□□□ -0.03
USP49-203ENST00000394253 HGSO14964 777 aaPredicted RBP14.87□□□□□ -0.03
USP49-203ENST00000394253 SPDYE3A6NKU9 549 aa14.87□□□□□ -0.03
USP49-203ENST00000394253 CREB3O43889 395 aa14.87□□□□□ -0.03
USP49-203ENST00000394253 GSTA1P08263 222 aa14.87□□□□□ -0.03
USP49-203ENST00000394253 GSTA2P09210 222 aa14.87□□□□□ -0.03
USP49-203ENST00000394253 NUP58Q9BVL2 599 aa14.87□□□□□ -0.03
USP49-203ENST00000394253 NMIQ13287 307 aaPredicted RBP14.87□□□□□ -0.03
USP49-203ENST00000394253 CFAP61Q8NHU2 1237 aa14.87□□□□□ -0.03
USP49-203ENST00000394253 KRT8P05787 483 aa14.87□□□□□ -0.03
USP49-203ENST00000394253 EEF1B2P24534 225 aaKnown RBP14.87□□□□□ -0.03
USP49-203ENST00000394253 TMTC4Q5T4D3 741 aa14.87□□□□□ -0.03
USP49-203ENST00000394253 BIRC2Q13490 618 aa14.87□□□□□ -0.03
USP49-203ENST00000394253 ZBTB41Q5SVQ8 909 aa14.87□□□□□ -0.03
USP49-203ENST00000394253 TRIM42Q8IWZ5 723 aa14.87□□□□□ -0.03
USP49-203ENST00000394253 CDCA7LQ96GN5 454 aa14.87□□□□□ -0.03
USP49-203ENST00000394253 SOGA1O94964 1423 aa14.87□□□□□ -0.03
USP49-203ENST00000394253 GOLGA8KD6RF30 607 aa14.86□□□□□ -0.03
USP49-203ENST00000394253 KRT5P13647 590 aa14.86□□□□□ -0.03
USP49-203ENST00000394253 ALDH1L2Q3SY69 923 aa14.86□□□□□ -0.03
USP49-203ENST00000394253 NXNQ6DKJ4 435 aa14.86□□□□□ -0.03
USP49-203ENST00000394253 NBPF3Q9H094 633 aa14.86□□□□□ -0.03
USP49-203ENST00000394253 PSMD7P51665 324 aa14.86□□□□□ -0.03
USP49-203ENST00000394253 BMP2KLQ5H9B9 411 aa14.86□□□□□ -0.03
USP49-203ENST00000394253 IFIT1BQ5T764 474 aaKnown RBP14.86□□□□□ -0.03
USP49-203ENST00000394253 KRT10P13645 584 aa14.86□□□□□ -0.03
USP49-203ENST00000394253 PPP2R1AP30153 589 aa14.86□□□□□ -0.03
USP49-203ENST00000394253 IQCDQ96DY2 449 aa14.86□□□□□ -0.03
USP49-203ENST00000394253 TYW1Q9NV66 732 aaKnown RBP14.86□□□□□ -0.03
USP49-203ENST00000394253 NUCB1Q02818 461 aa14.86□□□□□ -0.03
USP49-203ENST00000394253 HSP90AA4PQ58FG1 418 aa14.86□□□□□ -0.03
USP49-203ENST00000394253 TCHHQ07283 1943 aa14.86□□□□□ -0.03
USP49-203ENST00000394253 SUN1O94901 812 aa14.86□□□□□ -0.03
USP49-203ENST00000394253 UIMC1Q96RL1 719 aa14.86□□□□□ -0.03
USP49-203ENST00000394253 GOLGA8CPA6NN73 597 aa14.86□□□□□ -0.03
USP49-203ENST00000394253 TTLL12Q14166 644 aaPredicted RBP14.86□□□□□ -0.03
USP49-203ENST00000394253 EFCAB14O75071 495 aa14.85□□□□□ -0.03
USP49-203ENST00000394253 FLOT1O75955 427 aa14.85□□□□□ -0.03
USP49-203ENST00000394253 WTAPQ15007 396 aa14.85□□□□□ -0.03
USP49-203ENST00000394253 TSC22D3Q99576 134 aa14.85□□□□□ -0.03
USP49-203ENST00000394253 IFNKQ9P0W0 207 aa14.85□□□□□ -0.03
USP49-203ENST00000394253 ELP1O95163 1332 aa14.85□□□□□ -0.03
USP49-203ENST00000394253 SEPT2Q15019 361 aa14.85□□□□□ -0.03
USP49-203ENST00000394253 BRD3Q15059 726 aa14.85□□□□□ -0.03
USP49-203ENST00000394253 ZNF449Q6P9G9 518 aa14.85□□□□□ -0.03
USP49-203ENST00000394253 SART1O43290 800 aaKnown RBP14.85□□□□□ -0.03
USP49-203ENST00000394253 IGSF3O75054 1194 aa14.85□□□□□ -0.03
USP49-203ENST00000394253 ST13P4Q8IZP2 240 aaPredicted RBP14.85□□□□□ -0.03
USP49-203ENST00000394253 DNAJC25Q9H1X3 360 aa14.85□□□□□ -0.03
USP49-203ENST00000394253 GGNBP2Q9H3C7 697 aa14.85□□□□□ -0.03
USP49-203ENST00000394253 PPP1R12AO14974 1030 aaPredicted RBP14.85□□□□□ -0.03
USP49-203ENST00000394253 ZPR1O75312 459 aa14.85□□□□□ -0.03
USP49-203ENST00000394253 TRIM8Q9BZR9 551 aa14.85□□□□□ -0.03
USP49-203ENST00000394253 DDX41Q9UJV9 622 aaKnown RBP14.85□□□□□ -0.03
USP49-203ENST00000394253 DCAF17Q5H9S7 520 aaPredicted RBP14.84□□□□□ -0.03
USP49-203ENST00000394253 ZNF530Q6P9A1 599 aaPredicted RBP14.84□□□□□ -0.03
USP49-203ENST00000394253 USP48Q86UV5 1035 aa14.84□□□□□ -0.03
USP49-203ENST00000394253 GFM2Q969S9 779 aaKnown RBP14.84□□□□□ -0.03
USP49-203ENST00000394253 TRIM56Q9BRZ2 755 aaKnown RBP14.84□□□□□ -0.03
USP49-203ENST00000394253 SMTNP53814 917 aa14.84□□□□□ -0.03
USP49-203ENST00000394253 GSTO1P78417 241 aa14.84□□□□□ -0.03
USP49-203ENST00000394253 PPP2R5DQ14738 602 aa14.84□□□□□ -0.03
USP49-203ENST00000394253 RTN1Q16799 776 aa14.84□□□□□ -0.03
USP49-203ENST00000394253 CABP5Q9NP86 173 aa14.84□□□□□ -0.03
USP49-203ENST00000394253 MAFGO15525 162 aa14.84□□□□□ -0.03
USP49-203ENST00000394253 ZBTB43O43298 467 aa14.84□□□□□ -0.03
USP49-203ENST00000394253 TMOD4Q9NZQ9 345 aa14.84□□□□□ -0.03
USP49-203ENST00000394253 PTPRCP08575 1304 aa14.84□□□□□ -0.03
USP49-203ENST00000394253 XRCC6P12956 609 aaKnown RBP eCLIP14.84□□□□□ -0.03
USP49-203ENST00000394253 BRAPQ7Z569 592 aa14.84□□□□□ -0.03
USP49-203ENST00000394253 CAPS2Q9BXY5 557 aa14.84□□□□□ -0.03
USP49-203ENST00000394253 CALM1P0DP23 149 aa14.84□□□□□ -0.03
USP49-203ENST00000394253 CALM2P0DP24 149 aa14.84□□□□□ -0.03
USP49-203ENST00000394253 CALM3P0DP25 149 aa14.84□□□□□ -0.03
USP49-203ENST00000394253 KRT80Q6KB66 452 aa14.84□□□□□ -0.03
USP49-203ENST00000394253 RAPGEF2Q9Y4G8 1499 aa14.84□□□□□ -0.03
USP49-203ENST00000394253 GTPBP10A4D1E9 387 aaKnown RBP14.84□□□□□ -0.03
USP49-203ENST00000394253 GJC2Q5T442 439 aaPredicted RBP14.84□□□□□ -0.03
USP49-203ENST00000394253 CNNM4Q6P4Q7 775 aa14.84□□□□□ -0.03
USP49-203ENST00000394253 ZNF277Q9NRM2 450 aaPredicted RBP14.84□□□□□ -0.03
USP49-203ENST00000394253 CNPY2Q9Y2B0 182 aa14.84□□□□□ -0.03
USP49-203ENST00000394253 OCA2Q04671 838 aa14.83□□□□□ -0.03
USP49-203ENST00000394253 KMT5BQ4FZB7 885 aa14.83□□□□□ -0.03
USP49-203ENST00000394253 RRP36Q96EU6 259 aaKnown RBP14.83□□□□□ -0.03
USP49-203ENST00000394253 KIF1CO43896 1103 aaKnown RBP14.83□□□□□ -0.04
USP49-203ENST00000394253 CTNNA1P35221 906 aaKnown RBP14.83□□□□□ -0.04
USP49-203ENST00000394253 RAPGEF1Q13905 1077 aa14.83□□□□□ -0.04
USP49-203ENST00000394253 N4BP2L2Q92802 583 aaPredicted RBP14.83□□□□□ -0.04
USP49-203ENST00000394253 NAP1L4Q99733 375 aaKnown RBP14.83□□□□□ -0.04
USP49-203ENST00000394253 ANGPTL2Q9UKU9 493 aa14.83□□□□□ -0.04
USP49-203ENST00000394253 TRIM75PA6NK02 468 aa14.83□□□□□ -0.04
USP49-203ENST00000394253 MAP3K7O43318 606 aa14.83□□□□□ -0.04
USP49-203ENST00000394253 CWF19L2Q2TBE0 894 aaKnown RBP14.83□□□□□ -0.04
USP49-203ENST00000394253 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.83□□□□□ -0.04
USP49-203ENST00000394253 CCDC105Q8IYK2 499 aa14.83□□□□□ -0.04
USP49-203ENST00000394253 ARHGAP6O43182 974 aa14.83□□□□□ -0.04
USP49-203ENST00000394253 PPP2R5CQ13362 524 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms