RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 TMEM87BQ96K49 555 aa22.38■■□□□ 1.17
CLDND1-203ENST00000394181 SF3B2Q13435 895 aaKnown RBP22.37■■□□□ 1.17
CLDND1-203ENST00000394181 CCDC144CPQ8IYA2 1237 aa22.37■■□□□ 1.17
CLDND1-203ENST00000394181 ADD1P35611 737 aaKnown RBP22.36■■□□□ 1.17
CLDND1-203ENST00000394181 BAG6P46379 1132 aa22.36■■□□□ 1.17
CLDND1-203ENST00000394181 GIMAP6Q6P9H5 292 aa22.36■■□□□ 1.17
CLDND1-203ENST00000394181 APOA5Q6Q788 366 aa22.36■■□□□ 1.17
CLDND1-203ENST00000394181 MXD3Q9BW11 206 aa22.36■■□□□ 1.17
CLDND1-203ENST00000394181 ZC3H12CQ9C0D7 883 aaKnown RBP22.36■■□□□ 1.17
CLDND1-203ENST00000394181 NFXL1Q6ZNB6 911 aa22.36■■□□□ 1.17
CLDND1-203ENST00000394181 RBM27Q9P2N5 1060 aaKnown RBP22.36■■□□□ 1.17
CLDND1-203ENST00000394181 USP17L8P0C7I0 530 aa22.35■■□□□ 1.17
CLDND1-203ENST00000394181 TPRNQ4KMQ1 711 aa22.35■■□□□ 1.17
CLDND1-203ENST00000394181 RNF41Q9H4P4 317 aaPredicted RBP22.35■■□□□ 1.17
CLDND1-203ENST00000394181 ATP8A2Q9NTI2 1148 aa22.35■■□□□ 1.17
CLDND1-203ENST00000394181 MAST2Q6P0Q8 1798 aa22.35■■□□□ 1.17
CLDND1-203ENST00000394181 CCDC88AQ3V6T2 1871 aa22.35■■□□□ 1.17
CLDND1-203ENST00000394181 TCHHQ07283 1943 aa22.35■■□□□ 1.17
CLDND1-203ENST00000394181 CDC27P30260 824 aa22.35■■□□□ 1.17
CLDND1-203ENST00000394181 MICU3Q86XE3 530 aa22.35■■□□□ 1.17
CLDND1-203ENST00000394181 FBXW7Q969H0 707 aa22.35■■□□□ 1.17
CLDND1-203ENST00000394181 RTFDC1Q9BY42 306 aaPredicted RBP22.35■■□□□ 1.17
CLDND1-203ENST00000394181 MKRN1Q9UHC7 482 aaKnown RBP22.35■■□□□ 1.17
CLDND1-203ENST00000394181 CHD4Q14839 1912 aa22.34■■□□□ 1.17
CLDND1-203ENST00000394181 FIBPO43427 364 aa22.34■■□□□ 1.17
CLDND1-203ENST00000394181 GSTO1P78417 241 aa22.34■■□□□ 1.17
CLDND1-203ENST00000394181 HMGN5P82970 282 aaKnown RBP22.34■■□□□ 1.17
CLDND1-203ENST00000394181 GUCY1B3Q02153 619 aa22.34■■□□□ 1.17
CLDND1-203ENST00000394181 CAVIN1Q6NZI2 390 aaKnown RBP22.34■■□□□ 1.17
CLDND1-203ENST00000394181 SGMS1Q86VZ5 419 aa22.34■■□□□ 1.17
CLDND1-203ENST00000394181 COA1Q9GZY4 146 aa22.34■■□□□ 1.17
CLDND1-203ENST00000394181 KCNQ5Q9NR82 932 aa22.34■■□□□ 1.17
CLDND1-203ENST00000394181 MROH7-TTC4A0A0A0MT08 1334 aa22.34■■□□□ 1.17
CLDND1-203ENST00000394181 STYK1Q6J9G0 422 aa22.33■■□□□ 1.17
CLDND1-203ENST00000394181 CERS5Q8N5B7 392 aa22.33■■□□□ 1.17
CLDND1-203ENST00000394181 FAM217BQ9NTX9 383 aaPredicted RBP22.33■■□□□ 1.17
CLDND1-203ENST00000394181 MCM9Q9NXL9 1143 aa22.33■■□□□ 1.17
CLDND1-203ENST00000394181 ATP6V1DQ9Y5K8 247 aa22.33■■□□□ 1.17
CLDND1-203ENST00000394181 FAM205AQ6ZU69 1335 aa22.33■■□□□ 1.17
CLDND1-203ENST00000394181 H3BQV1 296 aa22.33■■□□□ 1.16
CLDND1-203ENST00000394181 LIFRP42702 1097 aa22.33■■□□□ 1.16
CLDND1-203ENST00000394181 METAP2P50579 478 aaKnown RBP eCLIP22.33■■□□□ 1.16
CLDND1-203ENST00000394181 IFFO2Q5TF58 517 aa22.33■■□□□ 1.16
CLDND1-203ENST00000394181 PPP4CP60510 307 aa22.32■■□□□ 1.16
CLDND1-203ENST00000394181 OTUD7BQ6GQQ9 843 aa22.32■■□□□ 1.16
CLDND1-203ENST00000394181 TMED8Q6PL24 325 aaPredicted RBP22.32■■□□□ 1.16
CLDND1-203ENST00000394181 TGFBRAP1Q8WUH2 860 aa22.32■■□□□ 1.16
CLDND1-203ENST00000394181 GJB4Q9NTQ9 266 aa22.32■■□□□ 1.16
CLDND1-203ENST00000394181 F8W031 263 aaPredicted RBP22.32■■□□□ 1.16
CLDND1-203ENST00000394181 ZBTB43O43298 467 aa22.32■■□□□ 1.16
CLDND1-203ENST00000394181 RANBP6O60518 1105 aaKnown RBP22.32■■□□□ 1.16
CLDND1-203ENST00000394181 FGRP09769 529 aa22.32■■□□□ 1.16
CLDND1-203ENST00000394181 BTDP43251 543 aa22.32■■□□□ 1.16
CLDND1-203ENST00000394181 USP5P45974 858 aa22.32■■□□□ 1.16
CLDND1-203ENST00000394181 RESTQ13127 1097 aa22.32■■□□□ 1.16
CLDND1-203ENST00000394181 ESR2Q92731 530 aa22.32■■□□□ 1.16
CLDND1-203ENST00000394181 SLX4Q8IY92 1834 aa22.32■■□□□ 1.16
CLDND1-203ENST00000394181 CPLX1O14810 134 aa22.31■■□□□ 1.16
CLDND1-203ENST00000394181 TMEM87AQ8NBN3 555 aa22.31■■□□□ 1.16
CLDND1-203ENST00000394181 TMX4Q9H1E5 349 aaPredicted RBP22.31■■□□□ 1.16
CLDND1-203ENST00000394181 TFIP11Q9UBB9 837 aaKnown RBP22.31■■□□□ 1.16
CLDND1-203ENST00000394181 SLC12A7Q9Y666 1083 aa22.31■■□□□ 1.16
CLDND1-203ENST00000394181 CCDC69A6NI79 296 aa22.31■■□□□ 1.16
CLDND1-203ENST00000394181 BAG3O95817 575 aa22.31■■□□□ 1.16
CLDND1-203ENST00000394181 LDHCP07864 332 aa22.31■■□□□ 1.16
CLDND1-203ENST00000394181 PDIA4P13667 645 aaKnown RBP22.31■■□□□ 1.16
CLDND1-203ENST00000394181 WTAPQ15007 396 aa22.31■■□□□ 1.16
CLDND1-203ENST00000394181 DBNDD1Q9H9R9 158 aa22.31■■□□□ 1.16
CLDND1-203ENST00000394181 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.31■■□□□ 1.16
CLDND1-203ENST00000394181 GPR75-ASB3A0A0A6YYF3 556 aa22.3■■□□□ 1.16
CLDND1-203ENST00000394181 UBE2Q2LH0YL09 131 aa22.3■■□□□ 1.16
CLDND1-203ENST00000394181 DHX16O60231 1041 aaKnown RBP22.3■■□□□ 1.16
CLDND1-203ENST00000394181 SEC23AQ15436 765 aa22.3■■□□□ 1.16
CLDND1-203ENST00000394181 SBK1Q52WX2 424 aa22.3■■□□□ 1.16
CLDND1-203ENST00000394181 MAPKAPK5Q8IW41 473 aa22.3■■□□□ 1.16
CLDND1-203ENST00000394181 TBC1D22AQ8WUA7 517 aa22.3■■□□□ 1.16
CLDND1-203ENST00000394181 PHKBQ93100 1093 aa22.3■■□□□ 1.16
CLDND1-203ENST00000394181 ORC3Q9UBD5 711 aaPredicted RBP22.3■■□□□ 1.16
CLDND1-203ENST00000394181 GOLGA8AA7E2F4 631 aa22.29■■□□□ 1.16
CLDND1-203ENST00000394181 FAM47AQ5JRC9 791 aa22.29■■□□□ 1.16
CLDND1-203ENST00000394181 GAS2L3Q86XJ1 694 aa22.29■■□□□ 1.16
CLDND1-203ENST00000394181 C7orf43Q8WVR3 580 aa22.29■■□□□ 1.16
CLDND1-203ENST00000394181 DYNLL2Q96FJ2 89 aa22.29■■□□□ 1.16
CLDND1-203ENST00000394181 AIFM3Q96NN9 605 aa22.29■■□□□ 1.16
CLDND1-203ENST00000394181 SAP30BPQ9UHR5 308 aaKnown RBP22.29■■□□□ 1.16
CLDND1-203ENST00000394181 NMT2O60551 498 aa22.29■■□□□ 1.16
CLDND1-203ENST00000394181 NTRK3Q16288 839 aa22.29■■□□□ 1.16
CLDND1-203ENST00000394181 ENAHQ8N8S7 591 aaPredicted RBP22.29■■□□□ 1.16
CLDND1-203ENST00000394181 UBAC1Q9BSL1 405 aa22.29■■□□□ 1.16
CLDND1-203ENST00000394181 TMEM63CQ9P1W3 806 aa22.29■■□□□ 1.16
CLDND1-203ENST00000394181 ARPP21Q9UBL0 812 aaPredicted RBP22.29■■□□□ 1.16
CLDND1-203ENST00000394181 TNKSO95271 1327 aa22.29■■□□□ 1.16
CLDND1-203ENST00000394181 MYH2Q9UKX2 1941 aa22.29■■□□□ 1.16
CLDND1-203ENST00000394181 SART3Q15020 963 aaKnown RBP22.28■■□□□ 1.16
CLDND1-203ENST00000394181 C12orf60Q5U649 245 aa22.28■■□□□ 1.16
CLDND1-203ENST00000394181 TAOK2Q9UL54 1235 aa22.28■■□□□ 1.16
CLDND1-203ENST00000394181 IGSF3O75054 1194 aa22.28■■□□□ 1.16
CLDND1-203ENST00000394181 RHBDL3P58872 404 aa22.28■■□□□ 1.16
CLDND1-203ENST00000394181 ZSCAN10Q96SZ4 725 aaPredicted RBP22.28■■□□□ 1.16
CLDND1-203ENST00000394181 NOL10Q9BSC4 688 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms