RNA–Protein interactions for RNA: ENST00000393579.2

PCNPP3-201, Transcript of PEST containing nuclear protein pseudogene 3, humanhuman

BASIC

Gene PCNPP3, Length 471 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPP3-201ENST00000393579 ZNF423Q2M1K9 1284 aa4.4□□□□□ -1.71
PCNPP3-201ENST00000393579 ZXDCQ2QGD7 858 aaPredicted RBP4.4□□□□□ -1.71
PCNPP3-201ENST00000393579 TCERG1LQ5VWI1 586 aa4.4□□□□□ -1.71
PCNPP3-201ENST00000393579 CXorf38Q8TB03 319 aa4.4□□□□□ -1.71
PCNPP3-201ENST00000393579 ABHD4Q8TB40 342 aa4.4□□□□□ -1.71
PCNPP3-201ENST00000393579 KCNC2Q96PR1 638 aa4.4□□□□□ -1.71
PCNPP3-201ENST00000393579 GTF2IRD1Q9UHL9 959 aa4.4□□□□□ -1.71
PCNPP3-201ENST00000393579 GNAT3A8MTJ3 354 aa4.39□□□□□ -1.71
PCNPP3-201ENST00000393579 LIG1P18858 919 aa4.39□□□□□ -1.71
PCNPP3-201ENST00000393579 GDNFP39905 211 aa4.39□□□□□ -1.71
PCNPP3-201ENST00000393579 ID3Q02535 119 aa4.39□□□□□ -1.71
PCNPP3-201ENST00000393579 PUM1Q14671 1186 aaKnown RBP eCLIP4.39□□□□□ -1.71
PCNPP3-201ENST00000393579 TTLL4Q14679 1199 aa4.39□□□□□ -1.71
PCNPP3-201ENST00000393579 SPACA3Q8IXA5 215 aa4.39□□□□□ -1.71
PCNPP3-201ENST00000393579 FANCD2OSQ96PS1 177 aa4.39□□□□□ -1.71
PCNPP3-201ENST00000393579 ZC3H12CQ9C0D7 883 aaKnown RBP4.39□□□□□ -1.71
PCNPP3-201ENST00000393579 A0A096LPE4 126 aa4.38□□□□□ -1.71
PCNPP3-201ENST00000393579 A0A1W2PPZ6 126 aa4.38□□□□□ -1.71
PCNPP3-201ENST00000393579 SASH1O94885 1247 aa4.38□□□□□ -1.71
PCNPP3-201ENST00000393579 RAC2P15153 192 aa4.38□□□□□ -1.71
PCNPP3-201ENST00000393579 CDCA8Q53HL2 280 aa4.38□□□□□ -1.71
PCNPP3-201ENST00000393579 XKR5Q6UX68 686 aa4.38□□□□□ -1.71
PCNPP3-201ENST00000393579 MARCH10Q8NA82 808 aaPredicted RBP4.38□□□□□ -1.71
PCNPP3-201ENST00000393579 TRIM56Q9BRZ2 755 aaKnown RBP4.38□□□□□ -1.71
PCNPP3-201ENST00000393579 GGNBP2Q9H3C7 697 aa4.38□□□□□ -1.71
PCNPP3-201ENST00000393579 C19orf73Q9NVV2 129 aa4.38□□□□□ -1.71
PCNPP3-201ENST00000393579 PCOLCE2Q9UKZ9 415 aa4.38□□□□□ -1.71
PCNPP3-201ENST00000393579 CNOT6Q9ULM6 557 aaKnown RBP4.38□□□□□ -1.71
PCNPP3-201ENST00000393579 NOVA2Q9UNW9 492 aaKnown RBP4.38□□□□□ -1.71
PCNPP3-201ENST00000393579 TRIM13O60858 407 aa4.37□□□□□ -1.71
PCNPP3-201ENST00000393579 SLFN14P0C7P3 912 aa4.37□□□□□ -1.71
PCNPP3-201ENST00000393579 INSRRP14616 1297 aa4.37□□□□□ -1.71
PCNPP3-201ENST00000393579 OCLNQ16625 522 aa4.37□□□□□ -1.71
PCNPP3-201ENST00000393579 SWI5Q1ZZU3 235 aa4.37□□□□□ -1.71
PCNPP3-201ENST00000393579 HEXIM2Q96MH2 286 aaKnown RBP4.37□□□□□ -1.71
PCNPP3-201ENST00000393579 RFXAPO00287 272 aa4.36□□□□□ -1.71
PCNPP3-201ENST00000393579 PDGFAP04085 211 aa4.36□□□□□ -1.71
PCNPP3-201ENST00000393579 CLCN7P51798 805 aa4.36□□□□□ -1.71
PCNPP3-201ENST00000393579 HNRNPUQ00839 825 aaKnown RBP eCLIP4.36□□□□□ -1.71
PCNPP3-201ENST00000393579 SPRED3Q2MJR0 410 aa4.36□□□□□ -1.71
PCNPP3-201ENST00000393579 TMEM132EQ6IEE7 984 aa4.36□□□□□ -1.71
PCNPP3-201ENST00000393579 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.36□□□□□ -1.71
PCNPP3-201ENST00000393579 BAHD1Q8TBE0 780 aaPredicted RBP4.36□□□□□ -1.71
PCNPP3-201ENST00000393579 SNX29Q8TEQ0 813 aa4.36□□□□□ -1.71
PCNPP3-201ENST00000393579 CCDC120Q96HB5 630 aa4.36□□□□□ -1.71
PCNPP3-201ENST00000393579 CALR3Q96L12 384 aaKnown RBP4.36□□□□□ -1.71
PCNPP3-201ENST00000393579 ATP13A1Q9HD20 1204 aa4.36□□□□□ -1.71
PCNPP3-201ENST00000393579 OVOL3O00110 214 aa4.35□□□□□ -1.71
PCNPP3-201ENST00000393579 ZNF385BQ569K4 471 aa4.35□□□□□ -1.71
PCNPP3-201ENST00000393579 PEAR1Q5VY43 1037 aaPredicted RBP4.35□□□□□ -1.71
PCNPP3-201ENST00000393579 ZDHHC14Q8IZN3 488 aa4.35□□□□□ -1.71
PCNPP3-201ENST00000393579 WDR89Q96FK6 387 aaPredicted RBP4.35□□□□□ -1.71
PCNPP3-201ENST00000393579 LIN7BQ9HAP6 207 aa4.35□□□□□ -1.71
PCNPP3-201ENST00000393579 FOXD3Q9UJU5 478 aaPredicted RBP4.35□□□□□ -1.71
PCNPP3-201ENST00000393579 AMOTL2Q9Y2J4 779 aa4.35□□□□□ -1.71
PCNPP3-201ENST00000393579 ACIN1Q9UKV3 1341 aaKnown RBP4.35□□□□□ -1.71
PCNPP3-201ENST00000393579 OTOL1A6NHN0 477 aaPredicted RBP4.34□□□□□ -1.71
PCNPP3-201ENST00000393579 FAM155AB1AL88 458 aaPredicted RBP4.34□□□□□ -1.71
PCNPP3-201ENST00000393579 TNFRSF21O75509 655 aa4.34□□□□□ -1.71
PCNPP3-201ENST00000393579 POLR3DP05423 398 aaPredicted RBP4.34□□□□□ -1.71
PCNPP3-201ENST00000393579 GRIA4P48058 902 aa4.34□□□□□ -1.71
PCNPP3-201ENST00000393579 DLG4P78352 724 aa4.34□□□□□ -1.71
PCNPP3-201ENST00000393579 AP3B2Q13367 1082 aa4.34□□□□□ -1.71
PCNPP3-201ENST00000393579 NKPD1Q17RQ9 610 aa4.34□□□□□ -1.71
PCNPP3-201ENST00000393579 TTC6Q86TZ1 520 aa4.34□□□□□ -1.71
PCNPP3-201ENST00000393579 NPAS4Q8IUM7 802 aa4.34□□□□□ -1.71
PCNPP3-201ENST00000393579 MYLIPQ8WY64 445 aa4.34□□□□□ -1.71
PCNPP3-201ENST00000393579 ALPK1Q96QP1 1244 aa4.34□□□□□ -1.71
PCNPP3-201ENST00000393579 CCDC86Q9H6F5 360 aaKnown RBP4.34□□□□□ -1.71
PCNPP3-201ENST00000393579 DISC1Q9NRI5 854 aa4.34□□□□□ -1.71
PCNPP3-201ENST00000393579 CXXC1Q9P0U4 656 aaPredicted RBP4.34□□□□□ -1.71
PCNPP3-201ENST00000393579 SLAMF8Q9P0V8 285 aa4.34□□□□□ -1.71
PCNPP3-201ENST00000393579 ZNF777Q9ULD5 760 aaPredicted RBP4.34□□□□□ -1.71
PCNPP3-201ENST00000393579 KCTD3Q9Y597 815 aa4.34□□□□□ -1.71
PCNPP3-201ENST00000393579 B3GALT4O96024 378 aa4.33□□□□□ -1.72
PCNPP3-201ENST00000393579 CDKAL1Q5VV42 579 aa4.33□□□□□ -1.72
PCNPP3-201ENST00000393579 ZNF605Q86T29 641 aa4.33□□□□□ -1.72
PCNPP3-201ENST00000393579 TMEM151BQ8IW70 566 aa4.33□□□□□ -1.72
PCNPP3-201ENST00000393579 FEZF2Q8TBJ5 459 aa4.33□□□□□ -1.72
PCNPP3-201ENST00000393579 ISL2Q96A47 359 aa4.33□□□□□ -1.72
PCNPP3-201ENST00000393579 HSPA12BQ96MM6 686 aa4.33□□□□□ -1.72
PCNPP3-201ENST00000393579 FOXQ1Q9C009 403 aa4.33□□□□□ -1.72
PCNPP3-201ENST00000393579 XYLT2Q9H1B5 865 aa4.33□□□□□ -1.72
PCNPP3-201ENST00000393579 SYNGAP1Q96PV0 1343 aa4.32□□□□□ -1.72
PCNPP3-201ENST00000393579 H3BS24 57 aa4.32□□□□□ -1.72
PCNPP3-201ENST00000393579 IGF2BP3O00425 579 aaKnown RBP eCLIP4.32□□□□□ -1.72
PCNPP3-201ENST00000393579 MZF1P28698 734 aaPredicted RBP4.32□□□□□ -1.72
PCNPP3-201ENST00000393579 HK2P52789 917 aa4.32□□□□□ -1.72
PCNPP3-201ENST00000393579 AAMPQ13685 434 aa4.32□□□□□ -1.72
PCNPP3-201ENST00000393579 SPATS1Q496A3 300 aa4.32□□□□□ -1.72
PCNPP3-201ENST00000393579 GPR20Q99678 358 aa4.32□□□□□ -1.72
PCNPP3-201ENST00000393579 AKAP8O43823 692 aaKnown RBP4.31□□□□□ -1.72
PCNPP3-201ENST00000393579 NEFMP07197 916 aa4.31□□□□□ -1.72
PCNPP3-201ENST00000393579 SRFP11831 508 aa4.31□□□□□ -1.72
PCNPP3-201ENST00000393579 ERVFC1P60507 584 aa4.31□□□□□ -1.72
PCNPP3-201ENST00000393579 PLP2Q04941 152 aa4.31□□□□□ -1.72
PCNPP3-201ENST00000393579 NOM1Q5C9Z4 860 aaKnown RBP4.31□□□□□ -1.72
PCNPP3-201ENST00000393579 CCNJLQ8IV13 435 aa4.31□□□□□ -1.72
PCNPP3-201ENST00000393579 CRELD1Q96HD1 420 aa4.31□□□□□ -1.72
PCNPP3-201ENST00000393579 MCOLN1Q9GZU1 580 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms