RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 SBK1Q52WX2 424 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 HHIPL2Q6UWX4 724 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 ZDHHC9Q9Y397 364 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 BRCA2P51587 3418 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 USP17L3A6NCW0 530 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 USP17L4A6NCW7 530 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 PPIP5K2O43314 1243 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 CXCL9Q07325 125 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 NFIAQ12857 509 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 KIAA1211Q6ZU35 1233 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 USP17L1Q7RTZ2 530 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 DNAJC18Q9H819 358 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 WDR90Q96KV7 1748 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 USP17L8P0C7I0 530 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 GABPAQ06546 454 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 CDC42EP5Q6NZY7 148 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 CHST3Q7LGC8 479 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 FAM198AQ9UFP1 575 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 ZNF541Q9H0D2 1346 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 CTDNEP1O95476 244 aa12.86□□□□□ -0.35
PDGFD-202ENST00000393158 SCNN1DP51172 638 aa12.86□□□□□ -0.35
PDGFD-202ENST00000393158 NEK1Q96PY6 1258 aa12.86□□□□□ -0.35
PDGFD-202ENST00000393158 BRPF3Q9ULD4 1205 aa12.86□□□□□ -0.35
PDGFD-202ENST00000393158 ZBTB12Q9Y330 459 aaPredicted RBP12.86□□□□□ -0.35
PDGFD-202ENST00000393158 GNAT2P19087 354 aa12.86□□□□□ -0.35
PDGFD-202ENST00000393158 NOVP48745 357 aa12.86□□□□□ -0.35
PDGFD-202ENST00000393158 C12orf60Q5U649 245 aa12.86□□□□□ -0.35
PDGFD-202ENST00000393158 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.86□□□□□ -0.35
PDGFD-202ENST00000393158 LRRC2Q9BYS8 371 aa12.86□□□□□ -0.35
PDGFD-202ENST00000393158 PTPRFP10586 1907 aa12.85□□□□□ -0.35
PDGFD-202ENST00000393158 PPARAQ07869 468 aa12.85□□□□□ -0.35
PDGFD-202ENST00000393158 SEC23AQ15436 765 aa12.85□□□□□ -0.35
PDGFD-202ENST00000393158 LRRFIP1Q32MZ4 808 aaKnown RBP12.85□□□□□ -0.35
PDGFD-202ENST00000393158 RSBN1LQ6PCB5 846 aaPredicted RBP12.85□□□□□ -0.35
PDGFD-202ENST00000393158 ZSWIM5Q9P217 1185 aa12.85□□□□□ -0.35
PDGFD-202ENST00000393158 TTF2Q9UNY4 1162 aaKnown RBP12.85□□□□□ -0.35
PDGFD-202ENST00000393158 WDR19Q8NEZ3 1342 aa12.85□□□□□ -0.35
PDGFD-202ENST00000393158 SPTY2D1Q68D10 685 aaPredicted RBP12.85□□□□□ -0.35
PDGFD-202ENST00000393158 CRKP46108 304 aa12.85□□□□□ -0.35
PDGFD-202ENST00000393158 TAOK3Q9H2K8 898 aa12.85□□□□□ -0.35
PDGFD-202ENST00000393158 FAM217BQ9NTX9 383 aaPredicted RBP12.85□□□□□ -0.35
PDGFD-202ENST00000393158 SERPINA10Q9UK55 444 aa12.85□□□□□ -0.35
PDGFD-202ENST00000393158 ZNRF3Q9ULT6 936 aa12.85□□□□□ -0.35
PDGFD-202ENST00000393158 RLFQ13129 1914 aa12.84□□□□□ -0.35
PDGFD-202ENST00000393158 METTL16Q86W50 562 aaKnown RBP12.84□□□□□ -0.35
PDGFD-202ENST00000393158 DZIP1Q86YF9 867 aaKnown RBP12.84□□□□□ -0.35
PDGFD-202ENST00000393158 PRMT6Q96LA8 375 aaPredicted RBP12.84□□□□□ -0.35
PDGFD-202ENST00000393158 ATP8A2Q9NTI2 1148 aa12.84□□□□□ -0.35
PDGFD-202ENST00000393158 SCN4AP35499 1836 aa12.84□□□□□ -0.35
PDGFD-202ENST00000393158 USP17L12C9JPN9 530 aa12.84□□□□□ -0.35
PDGFD-202ENST00000393158 USP17L21D6R901 530 aa12.84□□□□□ -0.35
PDGFD-202ENST00000393158 RAD17O75943 681 aa12.84□□□□□ -0.35
PDGFD-202ENST00000393158 HDLBPQ00341 1268 aaKnown RBP12.84□□□□□ -0.35
PDGFD-202ENST00000393158 DHX32Q7L7V1 743 aaKnown RBP12.84□□□□□ -0.35
PDGFD-202ENST00000393158 KIAA0825Q8IV33 1275 aa12.84□□□□□ -0.35
PDGFD-202ENST00000393158 SUPT20HQ8NEM7 779 aa12.84□□□□□ -0.35
PDGFD-202ENST00000393158 DDRGK1Q96HY6 314 aa12.84□□□□□ -0.35
PDGFD-202ENST00000393158 LY9Q9HBG7 655 aa12.84□□□□□ -0.35
PDGFD-202ENST00000393158 IL17RBQ9NRM6 502 aa12.84□□□□□ -0.35
PDGFD-202ENST00000393158 RCSD1Q6JBY9 416 aa12.84□□□□□ -0.35
PDGFD-202ENST00000393158 CDAN1Q8IWY9 1227 aa12.84□□□□□ -0.35
PDGFD-202ENST00000393158 BCS1LQ9Y276 419 aa12.84□□□□□ -0.35
PDGFD-202ENST00000393158 SSC5DA1L4H1 1573 aa12.83□□□□□ -0.35
PDGFD-202ENST00000393158 F8W031 263 aaPredicted RBP12.83□□□□□ -0.36
PDGFD-202ENST00000393158 FRAT2O75474 233 aaPredicted RBP12.83□□□□□ -0.36
PDGFD-202ENST00000393158 AKNAD1Q5T1N1 836 aa12.83□□□□□ -0.36
PDGFD-202ENST00000393158 SOGA3Q5TF21 947 aa12.83□□□□□ -0.36
PDGFD-202ENST00000393158 MTMR14Q8NCE2 650 aa12.83□□□□□ -0.36
PDGFD-202ENST00000393158 Q6ZUG5 572 aa12.83□□□□□ -0.36
PDGFD-202ENST00000393158 TGFBRAP1Q8WUH2 860 aa12.83□□□□□ -0.36
PDGFD-202ENST00000393158 DOCK1Q14185 1865 aa12.83□□□□□ -0.36
PDGFD-202ENST00000393158 ZNF280AP59817 542 aaPredicted RBP12.83□□□□□ -0.36
PDGFD-202ENST00000393158 SHROOM1Q2M3G4 852 aaPredicted RBP12.83□□□□□ -0.36
PDGFD-202ENST00000393158 IDI2Q9BXS1 227 aa12.83□□□□□ -0.36
PDGFD-202ENST00000393158 PDRG1Q9NUG6 133 aa12.83□□□□□ -0.36
PDGFD-202ENST00000393158 B4E1Z4 1266 aa12.82□□□□□ -0.36
PDGFD-202ENST00000393158 ZNF213O14771 459 aa12.82□□□□□ -0.36
PDGFD-202ENST00000393158 MCCP23508 829 aa12.82□□□□□ -0.36
PDGFD-202ENST00000393158 SLC44A5Q8NCS7 719 aa12.82□□□□□ -0.36
PDGFD-202ENST00000393158 SMCHD1A6NHR9 2005 aa12.82□□□□□ -0.36
PDGFD-202ENST00000393158 SH2B2O14492 632 aaPredicted RBP12.82□□□□□ -0.36
PDGFD-202ENST00000393158 SCRN1Q12765 414 aa12.82□□□□□ -0.36
PDGFD-202ENST00000393158 RRP1BQ14684 758 aaKnown RBP12.82□□□□□ -0.36
PDGFD-202ENST00000393158 IMMTQ16891 758 aaKnown RBP12.82□□□□□ -0.36
PDGFD-202ENST00000393158 SHISA4Q96DD7 197 aa12.82□□□□□ -0.36
PDGFD-202ENST00000393158 DYNLL2Q96FJ2 89 aa12.82□□□□□ -0.36
PDGFD-202ENST00000393158 CYP46A1Q9Y6A2 500 aa12.82□□□□□ -0.36
PDGFD-202ENST00000393158 PLIN4Q96Q06 1357 aa12.82□□□□□ -0.36
PDGFD-202ENST00000393158 ASTN2O75129 1339 aaPredicted RBP12.82□□□□□ -0.36
PDGFD-202ENST00000393158 JAG1P78504 1218 aa12.82□□□□□ -0.36
PDGFD-202ENST00000393158 SPDYE2BA6NHP3 402 aa12.81□□□□□ -0.36
PDGFD-202ENST00000393158 ORC4O43929 436 aa12.81□□□□□ -0.36
PDGFD-202ENST00000393158 NMT2O60551 498 aa12.81□□□□□ -0.36
PDGFD-202ENST00000393158 SPDYE6P0CI01 402 aa12.81□□□□□ -0.36
PDGFD-202ENST00000393158 CACNB3P54284 484 aa12.81□□□□□ -0.36
PDGFD-202ENST00000393158 ZKSCAN1P17029 563 aaPredicted RBP12.81□□□□□ -0.36
PDGFD-202ENST00000393158 KRT32Q14532 448 aa12.81□□□□□ -0.36
PDGFD-202ENST00000393158 RNF20Q5VTR2 975 aa12.81□□□□□ -0.36
PDGFD-202ENST00000393158 BLOC1S2Q6QNY1 142 aa12.81□□□□□ -0.36
PDGFD-202ENST00000393158 LARGE2Q8N3Y3 721 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms