RNA–Protein interactions for RNA: ENST00000391310.1

RNU6-1239P-201, Transcript of RNA, U6 small nuclear 1239, pseudogene, humanhuman

BASIC

Gene RNU6-1239P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1239P-201ENST00000391310 EFEMP1Q12805 493 aa2.6□□□□□ -1.99
RNU6-1239P-201ENST00000391310 PDE3AQ14432 1141 aa2.6□□□□□ -1.99
RNU6-1239P-201ENST00000391310 NKPD1Q17RQ9 610 aa2.6□□□□□ -1.99
RNU6-1239P-201ENST00000391310 PEAR1Q5VY43 1037 aaPredicted RBP2.6□□□□□ -1.99
RNU6-1239P-201ENST00000391310 CAPN12Q6ZSI9 719 aa2.6□□□□□ -1.99
RNU6-1239P-201ENST00000391310 CRELD1Q96HD1 420 aa2.6□□□□□ -1.99
RNU6-1239P-201ENST00000391310 FANCD2OSQ96PS1 177 aa2.6□□□□□ -1.99
RNU6-1239P-201ENST00000391310 PPP1R12CQ9BZL4 782 aa2.6□□□□□ -1.99
RNU6-1239P-201ENST00000391310 CARS2Q9HA77 564 aaKnown RBP2.6□□□□□ -1.99
RNU6-1239P-201ENST00000391310 DISC1Q9NRI5 854 aa2.6□□□□□ -1.99
RNU6-1239P-201ENST00000391310 GTF2IRD1Q9UHL9 959 aa2.6□□□□□ -1.99
RNU6-1239P-201ENST00000391310 PCOLCE2Q9UKZ9 415 aa2.6□□□□□ -1.99
RNU6-1239P-201ENST00000391310 A0A096LPE4 126 aa2.59□□□□□ -1.99
RNU6-1239P-201ENST00000391310 A0A1W2PPZ6 126 aa2.59□□□□□ -1.99
RNU6-1239P-201ENST00000391310 AKAP8O43823 692 aaKnown RBP2.59□□□□□ -1.99
RNU6-1239P-201ENST00000391310 PRMT3O60678 531 aa2.59□□□□□ -1.99
RNU6-1239P-201ENST00000391310 SASH1O94885 1247 aa2.59□□□□□ -1.99
RNU6-1239P-201ENST00000391310 B3GALT4O96024 378 aa2.59□□□□□ -1.99
RNU6-1239P-201ENST00000391310 SLFN14P0C7P3 912 aa2.59□□□□□ -1.99
RNU6-1239P-201ENST00000391310 RAC2P15153 192 aa2.59□□□□□ -1.99
RNU6-1239P-201ENST00000391310 PCSK2P16519 638 aa2.59□□□□□ -1.99
RNU6-1239P-201ENST00000391310 DLG4P78352 724 aa2.59□□□□□ -1.99
RNU6-1239P-201ENST00000391310 ID3Q02535 119 aa2.59□□□□□ -1.99
RNU6-1239P-201ENST00000391310 NAA30Q147X3 362 aaPredicted RBP2.59□□□□□ -1.99
RNU6-1239P-201ENST00000391310 SPATS1Q496A3 300 aa2.59□□□□□ -1.99
RNU6-1239P-201ENST00000391310 ATCAYQ86WG3 371 aa2.59□□□□□ -1.99
RNU6-1239P-201ENST00000391310 TMEM151BQ8IW70 566 aa2.59□□□□□ -1.99
RNU6-1239P-201ENST00000391310 TOP6BLQ8N6T0 577 aa2.59□□□□□ -1.99
RNU6-1239P-201ENST00000391310 ABHD4Q8TB40 342 aa2.59□□□□□ -1.99
RNU6-1239P-201ENST00000391310 GLMNQ92990 594 aa2.59□□□□□ -1.99
RNU6-1239P-201ENST00000391310 GGNBP2Q9H3C7 697 aa2.59□□□□□ -1.99
RNU6-1239P-201ENST00000391310 LATS2Q9NRM7 1088 aa2.59□□□□□ -1.99
RNU6-1239P-201ENST00000391310 MYRFQ9Y2G1 1151 aa2.59□□□□□ -1.99
RNU6-1239P-201ENST00000391310 ACIN1Q9UKV3 1341 aaKnown RBP2.59□□□□□ -2
RNU6-1239P-201ENST00000391310 OTOL1A6NHN0 477 aaPredicted RBP2.58□□□□□ -2
RNU6-1239P-201ENST00000391310 PHACTR2O75167 634 aa2.58□□□□□ -2
RNU6-1239P-201ENST00000391310 SEMA7AO75326 666 aa2.58□□□□□ -2
RNU6-1239P-201ENST00000391310 INSRRP14616 1297 aa2.58□□□□□ -2
RNU6-1239P-201ENST00000391310 AP3B2Q13367 1082 aa2.58□□□□□ -2
RNU6-1239P-201ENST00000391310 PUM1Q14671 1186 aaKnown RBP eCLIP2.58□□□□□ -2
RNU6-1239P-201ENST00000391310 TTLL4Q14679 1199 aa2.58□□□□□ -2
RNU6-1239P-201ENST00000391310 ZNF385BQ569K4 471 aa2.58□□□□□ -2
RNU6-1239P-201ENST00000391310 NPAS4Q8IUM7 802 aa2.58□□□□□ -2
RNU6-1239P-201ENST00000391310 CCNJLQ8IV13 435 aa2.58□□□□□ -2
RNU6-1239P-201ENST00000391310 TTC16Q8NEE8 873 aa2.58□□□□□ -2
RNU6-1239P-201ENST00000391310 CNOT6Q9ULM6 557 aaKnown RBP2.58□□□□□ -2
RNU6-1239P-201ENST00000391310 PCDHGC5Q9Y5F6 944 aa2.58□□□□□ -2
RNU6-1239P-201ENST00000391310 A6NHS1 94 aa2.57□□□□□ -2
RNU6-1239P-201ENST00000391310 GNAT3A8MTJ3 354 aa2.57□□□□□ -2
RNU6-1239P-201ENST00000391310 RFXAPO00287 272 aa2.57□□□□□ -2
RNU6-1239P-201ENST00000391310 PEX10O60683 326 aa2.57□□□□□ -2
RNU6-1239P-201ENST00000391310 RNGTTO60942 597 aaKnown RBP2.57□□□□□ -2
RNU6-1239P-201ENST00000391310 TNFRSF21O75509 655 aa2.57□□□□□ -2
RNU6-1239P-201ENST00000391310 PDGFAP04085 211 aa2.57□□□□□ -2
RNU6-1239P-201ENST00000391310 HCLS1P14317 486 aaPredicted RBP2.57□□□□□ -2
RNU6-1239P-201ENST00000391310 LMOD1P29536 600 aaPredicted RBP2.57□□□□□ -2
RNU6-1239P-201ENST00000391310 GRIA4P48058 902 aa2.57□□□□□ -2
RNU6-1239P-201ENST00000391310 KIF4BQ2VIQ3 1234 aa2.57□□□□□ -2
RNU6-1239P-201ENST00000391310 C8orf34Q49A92 452 aa2.57□□□□□ -2
RNU6-1239P-201ENST00000391310 SNX29Q8TEQ0 813 aa2.57□□□□□ -2
RNU6-1239P-201ENST00000391310 EDEM1Q92611 657 aa2.57□□□□□ -2
RNU6-1239P-201ENST00000391310 WDR89Q96FK6 387 aaPredicted RBP2.57□□□□□ -2
RNU6-1239P-201ENST00000391310 ALPK1Q96QP1 1244 aa2.57□□□□□ -2
RNU6-1239P-201ENST00000391310 MKNK1Q9BUB5 465 aa2.57□□□□□ -2
RNU6-1239P-201ENST00000391310 CCDC86Q9H6F5 360 aaKnown RBP2.57□□□□□ -2
RNU6-1239P-201ENST00000391310 ATP13A1Q9HD20 1204 aa2.57□□□□□ -2
RNU6-1239P-201ENST00000391310 SEMA3GQ9NS98 782 aa2.57□□□□□ -2
RNU6-1239P-201ENST00000391310 NEFMP07197 916 aa2.56□□□□□ -2
RNU6-1239P-201ENST00000391310 LIG1P18858 919 aa2.56□□□□□ -2
RNU6-1239P-201ENST00000391310 MZF1P28698 734 aaPredicted RBP2.56□□□□□ -2
RNU6-1239P-201ENST00000391310 HNRNPUQ00839 825 aaKnown RBP eCLIP2.56□□□□□ -2
RNU6-1239P-201ENST00000391310 DNM1Q05193 864 aaKnown RBP2.56□□□□□ -2
RNU6-1239P-201ENST00000391310 FAM69CQ0P6D2 419 aa2.56□□□□□ -2
RNU6-1239P-201ENST00000391310 SPRED3Q2MJR0 410 aa2.56□□□□□ -2
RNU6-1239P-201ENST00000391310 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.56□□□□□ -2
RNU6-1239P-201ENST00000391310 MYLIPQ8WY64 445 aa2.56□□□□□ -2
RNU6-1239P-201ENST00000391310 ISL2Q96A47 359 aa2.56□□□□□ -2
RNU6-1239P-201ENST00000391310 TEPSINQ96N21 525 aa2.56□□□□□ -2
RNU6-1239P-201ENST00000391310 TCF12Q99081 682 aa2.56□□□□□ -2
RNU6-1239P-201ENST00000391310 MCOLN1Q9GZU1 580 aa2.56□□□□□ -2
RNU6-1239P-201ENST00000391310 CXXC1Q9P0U4 656 aaPredicted RBP2.56□□□□□ -2
RNU6-1239P-201ENST00000391310 AMOTL2Q9Y2J4 779 aa2.56□□□□□ -2
RNU6-1239P-201ENST00000391310 KCTD3Q9Y597 815 aa2.56□□□□□ -2
RNU6-1239P-201ENST00000391310 MYOCOSA0A1B0GUC4 107 aa2.55□□□□□ -2
RNU6-1239P-201ENST00000391310 ZNF862O60290 1169 aa2.55□□□□□ -2
RNU6-1239P-201ENST00000391310 TTC6Q86TZ1 520 aa2.55□□□□□ -2
RNU6-1239P-201ENST00000391310 IRF2BP1Q8IU81 584 aa2.55□□□□□ -2
RNU6-1239P-201ENST00000391310 HSPA12BQ96MM6 686 aa2.55□□□□□ -2
RNU6-1239P-201ENST00000391310 FOXQ1Q9C009 403 aa2.55□□□□□ -2
RNU6-1239P-201ENST00000391310 ZNF576Q9H609 170 aa2.55□□□□□ -2
RNU6-1239P-201ENST00000391310 GCM1Q9NP62 436 aa2.55□□□□□ -2
RNU6-1239P-201ENST00000391310 SSU72Q9NP77 194 aaKnown RBP2.55□□□□□ -2
RNU6-1239P-201ENST00000391310 PRDM10Q9NQV6 1147 aa2.55□□□□□ -2
RNU6-1239P-201ENST00000391310 KRT82Q9NSB4 513 aa2.55□□□□□ -2
RNU6-1239P-201ENST00000391310 NOVA2Q9UNW9 492 aaKnown RBP2.55□□□□□ -2
RNU6-1239P-201ENST00000391310 MAPK8IP1Q9UQF2 711 aa2.55□□□□□ -2
RNU6-1239P-201ENST00000391310 TEX51A0A1B0GUA7 166 aa2.54□□□□□ -2
RNU6-1239P-201ENST00000391310 A0A1W2PP55 124 aa2.54□□□□□ -2
RNU6-1239P-201ENST00000391310 HPXP02790 462 aa2.54□□□□□ -2
RNU6-1239P-201ENST00000391310 UBTFP17480 764 aaKnown RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms