RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 GSX1Q9H4S2 264 aaPredicted RBP5.18□□□□□ -1.58
RNU6-550P-201ENST00000391057 PICK1Q9NRD5 415 aa5.18□□□□□ -1.58
RNU6-550P-201ENST00000391057 METTL5Q9NRN9 209 aaKnown RBP5.18□□□□□ -1.58
RNU6-550P-201ENST00000391057 FAM105AQ9NUU6 356 aa5.18□□□□□ -1.58
RNU6-550P-201ENST00000391057 KBTBD4Q9NVX7 518 aa5.18□□□□□ -1.58
RNU6-550P-201ENST00000391057 KIAA1522Q9P206 1035 aaPredicted RBP5.18□□□□□ -1.58
RNU6-550P-201ENST00000391057 STOML1Q9UBI4 398 aa5.18□□□□□ -1.58
RNU6-550P-201ENST00000391057 GGT7Q9UJ14 662 aa5.18□□□□□ -1.58
RNU6-550P-201ENST00000391057 PCDHB5Q9Y5E4 795 aa5.18□□□□□ -1.58
RNU6-550P-201ENST00000391057 SCAMP3O14828 347 aaKnown RBP5.17□□□□□ -1.58
RNU6-550P-201ENST00000391057 ERVK-24P63145 666 aa5.17□□□□□ -1.58
RNU6-550P-201ENST00000391057 FANCCQ00597 558 aa5.17□□□□□ -1.58
RNU6-550P-201ENST00000391057 LMNB2Q03252 620 aa5.17□□□□□ -1.58
RNU6-550P-201ENST00000391057 ZC3H12AQ5D1E8 599 aaKnown RBP5.17□□□□□ -1.58
RNU6-550P-201ENST00000391057 SNAP47Q5SQN1 464 aa5.17□□□□□ -1.58
RNU6-550P-201ENST00000391057 CLEC10AQ8IUN9 316 aa5.17□□□□□ -1.58
RNU6-550P-201ENST00000391057 TRIM42Q8IWZ5 723 aa5.17□□□□□ -1.58
RNU6-550P-201ENST00000391057 FBLIM1Q8WUP2 373 aa5.17□□□□□ -1.58
RNU6-550P-201ENST00000391057 RNF34Q969K3 372 aa5.17□□□□□ -1.58
RNU6-550P-201ENST00000391057 ZNF428Q96B54 188 aa5.17□□□□□ -1.58
RNU6-550P-201ENST00000391057 RHOVQ96L33 236 aa5.17□□□□□ -1.58
RNU6-550P-201ENST00000391057 ACSS3Q9H6R3 686 aa5.17□□□□□ -1.58
RNU6-550P-201ENST00000391057 C7orf69Q9H7B7 122 aa5.17□□□□□ -1.58
RNU6-550P-201ENST00000391057 FAM95CA0A1B0GW59 222 aa5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 DCDC2CA8MYV0 355 aa5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 MINDY4BA8MYZ0 360 aa5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 K7ELQ4 463 aaPredicted RBP5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 PF4P02776 101 aa5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 PTPN11Q06124 597 aaPredicted RBP5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 CAMK2GQ13555 558 aaPredicted RBP5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 TTLL4Q14679 1199 aa5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 NFKBIBQ15653 356 aa5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 WIPI1Q5MNZ9 446 aaPredicted RBP5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 LRFN4Q6PJG9 635 aa5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 PAOXQ6QHF9 649 aa5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 HDXQ7Z353 690 aa5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 EZH1Q92800 747 aaPredicted RBP5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 JARID2Q92833 1246 aaPredicted RBP5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 PLPPR2Q96GM1 343 aa5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 FAM83CQ9BQN1 747 aa5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 SEMA6BQ9H3T3 888 aa5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 COPRSQ9NQ92 184 aa5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 DISC1Q9NRI5 854 aa5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 DAGLAQ9Y4D2 1042 aa5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 CSADQ9Y600 493 aa5.16□□□□□ -1.58
RNU6-550P-201ENST00000391057 HMX2A2RU54 273 aa5.15□□□□□ -1.59
RNU6-550P-201ENST00000391057 PRAMEF27A3QJZ7 478 aa5.15□□□□□ -1.59
RNU6-550P-201ENST00000391057 GSC2O15499 205 aa5.15□□□□□ -1.59
RNU6-550P-201ENST00000391057 RNGTTO60942 597 aaKnown RBP5.15□□□□□ -1.59
RNU6-550P-201ENST00000391057 BPNT1O95861 308 aa5.15□□□□□ -1.59
RNU6-550P-201ENST00000391057 NFICP08651 508 aa5.15□□□□□ -1.59
RNU6-550P-201ENST00000391057 HCLS1P14317 486 aaPredicted RBP5.15□□□□□ -1.59
RNU6-550P-201ENST00000391057 FSTP19883 344 aa5.15□□□□□ -1.59
RNU6-550P-201ENST00000391057 FAM160A1Q05DH4 1040 aa5.15□□□□□ -1.59
RNU6-550P-201ENST00000391057 MAP7Q14244 749 aa5.15□□□□□ -1.59
RNU6-550P-201ENST00000391057 INPP5AQ14642 412 aa5.15□□□□□ -1.59
RNU6-550P-201ENST00000391057 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.15□□□□□ -1.59
RNU6-550P-201ENST00000391057 CCDC84Q86UT8 332 aaPredicted RBP5.15□□□□□ -1.59
RNU6-550P-201ENST00000391057 C12orf40Q86WS4 652 aa5.15□□□□□ -1.59
RNU6-550P-201ENST00000391057 SMYD4Q8IYR2 804 aaPredicted RBP5.15□□□□□ -1.59
RNU6-550P-201ENST00000391057 RNF214Q8ND24 703 aa5.15□□□□□ -1.59
RNU6-550P-201ENST00000391057 SEMA6CQ9H3T2 930 aa5.15□□□□□ -1.59
RNU6-550P-201ENST00000391057 SSU72Q9NP77 194 aaKnown RBP5.15□□□□□ -1.59
RNU6-550P-201ENST00000391057 SNCAIPQ9Y6H5 919 aa5.15□□□□□ -1.59
RNU6-550P-201ENST00000391057 F13A1P00488 732 aa5.14□□□□□ -1.59
RNU6-550P-201ENST00000391057 NEFMP07197 916 aa5.14□□□□□ -1.59
RNU6-550P-201ENST00000391057 RPL6Q02878 288 aaKnown RBP5.14□□□□□ -1.59
RNU6-550P-201ENST00000391057 PPM1JQ5JR12 505 aa5.14□□□□□ -1.59
RNU6-550P-201ENST00000391057 BNC2Q6ZN30 1099 aaPredicted RBP5.14□□□□□ -1.59
RNU6-550P-201ENST00000391057 CYFIP1Q7L576 1253 aa5.14□□□□□ -1.59
RNU6-550P-201ENST00000391057 USP48Q86UV5 1035 aa5.14□□□□□ -1.59
RNU6-550P-201ENST00000391057 GOLM1Q8NBJ4 401 aa5.14□□□□□ -1.59
RNU6-550P-201ENST00000391057 FANCGO15287 622 aa5.13□□□□□ -1.59
RNU6-550P-201ENST00000391057 IGLV1-40P01703 118 aa5.13□□□□□ -1.59
RNU6-550P-201ENST00000391057 EIF4A3P38919 411 aaKnown RBP5.13□□□□□ -1.59
RNU6-550P-201ENST00000391057 CDK8P49336 464 aa5.13□□□□□ -1.59
RNU6-550P-201ENST00000391057 NFIAQ12857 509 aa5.13□□□□□ -1.59
RNU6-550P-201ENST00000391057 PRSS36Q5K4E3 855 aa5.13□□□□□ -1.59
RNU6-550P-201ENST00000391057 ZBTB37Q5TC79 503 aa5.13□□□□□ -1.59
RNU6-550P-201ENST00000391057 RNF43Q68DV7 783 aa5.13□□□□□ -1.59
RNU6-550P-201ENST00000391057 CDC37L1Q7L3B6 337 aa5.13□□□□□ -1.59
RNU6-550P-201ENST00000391057 GATAD2BQ8WXI9 593 aa5.13□□□□□ -1.59
RNU6-550P-201ENST00000391057 ISL2Q96A47 359 aa5.13□□□□□ -1.59
RNU6-550P-201ENST00000391057 DBNDD2Q9BQY9 259 aa5.13□□□□□ -1.59
RNU6-550P-201ENST00000391057 LGR6Q9HBX8 967 aa5.13□□□□□ -1.59
RNU6-550P-201ENST00000391057 PCOLCE2Q9UKZ9 415 aa5.13□□□□□ -1.59
RNU6-550P-201ENST00000391057 SUPT16HQ9Y5B9 1047 aaKnown RBP5.13□□□□□ -1.59
RNU6-550P-201ENST00000391057 ADAM23O75077 832 aa5.12□□□□□ -1.59
RNU6-550P-201ENST00000391057 CILPO75339 1184 aa5.12□□□□□ -1.59
RNU6-550P-201ENST00000391057 GARTP22102 1010 aa5.12□□□□□ -1.59
RNU6-550P-201ENST00000391057 ETF1P62495 437 aaKnown RBP5.12□□□□□ -1.59
RNU6-550P-201ENST00000391057 HDLBPQ00341 1268 aaKnown RBP5.12□□□□□ -1.59
RNU6-550P-201ENST00000391057 RING1Q06587 406 aa5.12□□□□□ -1.59
RNU6-550P-201ENST00000391057 ZNF394Q53GI3 561 aa5.12□□□□□ -1.59
RNU6-550P-201ENST00000391057 FBXL19Q6PCT2 694 aa5.12□□□□□ -1.59
RNU6-550P-201ENST00000391057 SLC51AQ86UW1 340 aa5.12□□□□□ -1.59
RNU6-550P-201ENST00000391057 KIAA0825Q8IV33 1275 aa5.12□□□□□ -1.59
RNU6-550P-201ENST00000391057 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.12□□□□□ -1.59
RNU6-550P-201ENST00000391057 KCT2Q8NC54 265 aa5.12□□□□□ -1.59
RNU6-550P-201ENST00000391057 GIMAP7Q8NHV1 300 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms