RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 ZNF862O60290 1169 aa3.73□□□□□ -1.81
RNU6-239P-201ENST00000390990 HOXA5P20719 270 aa3.73□□□□□ -1.81
RNU6-239P-201ENST00000390990 ATP2B4P23634 1241 aa3.73□□□□□ -1.81
RNU6-239P-201ENST00000390990 MTMR3Q13615 1198 aa3.73□□□□□ -1.81
RNU6-239P-201ENST00000390990 TTLL4Q14679 1199 aa3.73□□□□□ -1.81
RNU6-239P-201ENST00000390990 KIRREL1Q96J84 757 aa3.73□□□□□ -1.81
RNU6-239P-201ENST00000390990 DIRC2Q96SL1 478 aa3.73□□□□□ -1.81
RNU6-239P-201ENST00000390990 ZC3H12CQ9C0D7 883 aaKnown RBP3.73□□□□□ -1.81
RNU6-239P-201ENST00000390990 ATXN3LQ9H3M9 355 aa3.73□□□□□ -1.81
RNU6-239P-201ENST00000390990 ZNF576Q9H609 170 aa3.73□□□□□ -1.81
RNU6-239P-201ENST00000390990 PCDHGC5Q9Y5F6 944 aa3.73□□□□□ -1.81
RNU6-239P-201ENST00000390990 RNGTTO60942 597 aaKnown RBP3.72□□□□□ -1.81
RNU6-239P-201ENST00000390990 ATG7O95352 703 aa3.72□□□□□ -1.81
RNU6-239P-201ENST00000390990 HCLS1P14317 486 aaPredicted RBP3.72□□□□□ -1.81
RNU6-239P-201ENST00000390990 ID3Q02535 119 aa3.72□□□□□ -1.81
RNU6-239P-201ENST00000390990 KCNA10Q16322 511 aa3.72□□□□□ -1.81
RNU6-239P-201ENST00000390990 TMEM67Q5HYA8 995 aa3.72□□□□□ -1.81
RNU6-239P-201ENST00000390990 SPACA3Q8IXA5 215 aa3.72□□□□□ -1.81
RNU6-239P-201ENST00000390990 TOP6BLQ8N6T0 577 aa3.72□□□□□ -1.81
RNU6-239P-201ENST00000390990 FBXO15Q8NCQ5 510 aaPredicted RBP3.72□□□□□ -1.81
RNU6-239P-201ENST00000390990 DDX54Q8TDD1 881 aaKnown RBP3.72□□□□□ -1.81
RNU6-239P-201ENST00000390990 ASB11Q8WXH4 323 aa3.72□□□□□ -1.81
RNU6-239P-201ENST00000390990 NSUN3Q9H649 340 aaKnown RBP3.72□□□□□ -1.81
RNU6-239P-201ENST00000390990 CD320Q9NPF0 282 aa3.72□□□□□ -1.81
RNU6-239P-201ENST00000390990 C19orf73Q9NVV2 129 aa3.72□□□□□ -1.81
RNU6-239P-201ENST00000390990 PCOLCE2Q9UKZ9 415 aa3.72□□□□□ -1.81
RNU6-239P-201ENST00000390990 NEFMP07197 916 aa3.71□□□□□ -1.82
RNU6-239P-201ENST00000390990 SLFN14P0C7P3 912 aa3.71□□□□□ -1.82
RNU6-239P-201ENST00000390990 ITPKAP23677 461 aa3.71□□□□□ -1.82
RNU6-239P-201ENST00000390990 EHHADHQ08426 723 aa3.71□□□□□ -1.82
RNU6-239P-201ENST00000390990 AP3B2Q13367 1082 aa3.71□□□□□ -1.82
RNU6-239P-201ENST00000390990 AAMPQ13685 434 aa3.71□□□□□ -1.82
RNU6-239P-201ENST00000390990 NKPD1Q17RQ9 610 aa3.71□□□□□ -1.82
RNU6-239P-201ENST00000390990 ATG14Q6ZNE5 492 aa3.71□□□□□ -1.82
RNU6-239P-201ENST00000390990 CYFIP1Q7L576 1253 aa3.71□□□□□ -1.82
RNU6-239P-201ENST00000390990 GALNT12Q8IXK2 581 aa3.71□□□□□ -1.82
RNU6-239P-201ENST00000390990 GTF3C2Q8WUA4 911 aaPredicted RBP3.71□□□□□ -1.82
RNU6-239P-201ENST00000390990 PITPNM2Q9BZ72 1349 aa3.7□□□□□ -1.82
RNU6-239P-201ENST00000390990 FZD6O60353 706 aa3.7□□□□□ -1.82
RNU6-239P-201ENST00000390990 TMEM253P0C7T8 217 aa3.7□□□□□ -1.82
RNU6-239P-201ENST00000390990 USP5P45974 858 aa3.7□□□□□ -1.82
RNU6-239P-201ENST00000390990 ZNF157P51786 506 aaPredicted RBP3.7□□□□□ -1.82
RNU6-239P-201ENST00000390990 KIF4BQ2VIQ3 1234 aa3.7□□□□□ -1.82
RNU6-239P-201ENST00000390990 USPL1Q5W0Q7 1092 aa3.7□□□□□ -1.82
RNU6-239P-201ENST00000390990 ALKBH2Q6NS38 261 aa3.7□□□□□ -1.82
RNU6-239P-201ENST00000390990 RELTQ969Z4 430 aa3.7□□□□□ -1.82
RNU6-239P-201ENST00000390990 ISL2Q96A47 359 aa3.7□□□□□ -1.82
RNU6-239P-201ENST00000390990 ETV2O00321 342 aaPredicted RBP3.69□□□□□ -1.82
RNU6-239P-201ENST00000390990 NPR3P17342 541 aa3.69□□□□□ -1.82
RNU6-239P-201ENST00000390990 KIAA0319Q5VV43 1072 aa3.69□□□□□ -1.82
RNU6-239P-201ENST00000390990 CIAPIN1Q6FI81 312 aa3.69□□□□□ -1.82
RNU6-239P-201ENST00000390990 GJD3Q8N144 294 aa3.69□□□□□ -1.82
RNU6-239P-201ENST00000390990 KRTAP9-8Q9BYQ0 159 aa3.69□□□□□ -1.82
RNU6-239P-201ENST00000390990 CCDC87Q9NVE4 849 aa3.69□□□□□ -1.82
RNU6-239P-201ENST00000390990 SMG5Q9UPR3 1016 aaKnown RBP3.69□□□□□ -1.82
RNU6-239P-201ENST00000390990 IGF2BP3O00425 579 aaKnown RBP eCLIP3.68□□□□□ -1.82
RNU6-239P-201ENST00000390990 MED14OSP0DP75 135 aa3.68□□□□□ -1.82
RNU6-239P-201ENST00000390990 FAAP100Q0VG06 881 aa3.68□□□□□ -1.82
RNU6-239P-201ENST00000390990 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.68□□□□□ -1.82
RNU6-239P-201ENST00000390990 CARS2Q9HA77 564 aaKnown RBP3.68□□□□□ -1.82
RNU6-239P-201ENST00000390990 SSU72Q9NP77 194 aaKnown RBP3.68□□□□□ -1.82
RNU6-239P-201ENST00000390990 DCP1AQ9NPI6 582 aaPredicted RBP3.68□□□□□ -1.82
RNU6-239P-201ENST00000390990 A0A0G2JLL6 359 aaPredicted RBP3.67□□□□□ -1.82
RNU6-239P-201ENST00000390990 TCAF2A6NFQ2 919 aa3.67□□□□□ -1.82
RNU6-239P-201ENST00000390990 NUAK1O60285 661 aa3.67□□□□□ -1.82
RNU6-239P-201ENST00000390990 FOXD2O60548 495 aaPredicted RBP3.67□□□□□ -1.82
RNU6-239P-201ENST00000390990 GSTP1P09211 210 aaKnown RBP3.67□□□□□ -1.82
RNU6-239P-201ENST00000390990 GDNFP39905 211 aa3.67□□□□□ -1.82
RNU6-239P-201ENST00000390990 LINC00310P59036 64 aa3.67□□□□□ -1.82
RNU6-239P-201ENST00000390990 KRTAP10-2P60368 255 aa3.67□□□□□ -1.82
RNU6-239P-201ENST00000390990 IRF2BPLQ9H1B7 796 aa3.67□□□□□ -1.82
RNU6-239P-201ENST00000390990 EHD4Q9H223 541 aa3.67□□□□□ -1.82
RNU6-239P-201ENST00000390990 ATP13A1Q9HD20 1204 aa3.67□□□□□ -1.82
RNU6-239P-201ENST00000390990 ABCB6Q9NP58 842 aa3.67□□□□□ -1.82
RNU6-239P-201ENST00000390990 PARD6AQ9NPB6 346 aa3.67□□□□□ -1.82
RNU6-239P-201ENST00000390990 PRDM10Q9NQV6 1147 aa3.67□□□□□ -1.82
RNU6-239P-201ENST00000390990 KRT82Q9NSB4 513 aa3.67□□□□□ -1.82
RNU6-239P-201ENST00000390990 GTF2IRD1Q9UHL9 959 aa3.67□□□□□ -1.82
RNU6-239P-201ENST00000390990 EOMESO95936 686 aa3.66□□□□□ -1.82
RNU6-239P-201ENST00000390990 GLDCP23378 1020 aa3.66□□□□□ -1.82
RNU6-239P-201ENST00000390990 CLCN7P51798 805 aa3.66□□□□□ -1.82
RNU6-239P-201ENST00000390990 PTPN12Q05209 780 aaKnown RBP3.66□□□□□ -1.82
RNU6-239P-201ENST00000390990 ZC3H12AQ5D1E8 599 aaKnown RBP3.66□□□□□ -1.82
RNU6-239P-201ENST00000390990 UBE3DQ7Z6J8 389 aa3.66□□□□□ -1.82
RNU6-239P-201ENST00000390990 PDZD3Q86UT5 571 aa3.66□□□□□ -1.82
RNU6-239P-201ENST00000390990 RNF214Q8ND24 703 aa3.66□□□□□ -1.82
RNU6-239P-201ENST00000390990 CSRNP1Q96S65 589 aa3.66□□□□□ -1.82
RNU6-239P-201ENST00000390990 EPB41L4BQ9H329 900 aa3.66□□□□□ -1.82
RNU6-239P-201ENST00000390990 SEMA3GQ9NS98 782 aa3.66□□□□□ -1.82
RNU6-239P-201ENST00000390990 RBAK-RBAKDNI3L0D1 243 aa3.65□□□□□ -1.83
RNU6-239P-201ENST00000390990 FAM13AO94988 1023 aa3.65□□□□□ -1.83
RNU6-239P-201ENST00000390990 BMP7P18075 431 aa3.65□□□□□ -1.83
RNU6-239P-201ENST00000390990 NTF4P34130 210 aa3.65□□□□□ -1.83
RNU6-239P-201ENST00000390990 RPS26P11Q5JNZ5 115 aaPredicted RBP3.65□□□□□ -1.83
RNU6-239P-201ENST00000390990 STK35Q8TDR2 534 aa3.65□□□□□ -1.83
RNU6-239P-201ENST00000390990 KCNN1Q92952 543 aa3.65□□□□□ -1.83
RNU6-239P-201ENST00000390990 KCNB2Q92953 911 aa3.65□□□□□ -1.83
RNU6-239P-201ENST00000390990 HSPA12BQ96MM6 686 aa3.65□□□□□ -1.83
RNU6-239P-201ENST00000390990 CNTNAP4Q9C0A0 1308 aa3.65□□□□□ -1.83
RNU6-239P-201ENST00000390990 TMEM238LA0A1B0GVL6 79 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms