RNA–Protein interactions for RNA: ENST00000390980.1

RNU6-578P-201, Transcript of RNA, U6 small nuclear 578, pseudogene, humanhuman

BASIC

Gene RNU6-578P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-578P-201ENST00000390980 SSFA2P28290 1259 aa3.67□□□□□ -1.82
RNU6-578P-201ENST00000390980 FKBP4Q02790 459 aaKnown RBP eCLIP3.67□□□□□ -1.82
RNU6-578P-201ENST00000390980 ZP2Q05996 745 aa3.67□□□□□ -1.82
RNU6-578P-201ENST00000390980 FYB2Q5VWT5 728 aa3.67□□□□□ -1.82
RNU6-578P-201ENST00000390980 SYDE1Q6ZW31 735 aaPredicted RBP3.67□□□□□ -1.82
RNU6-578P-201ENST00000390980 ANKLE2Q86XL3 938 aa3.67□□□□□ -1.82
RNU6-578P-201ENST00000390980 TOP6BLQ8N6T0 577 aa3.67□□□□□ -1.82
RNU6-578P-201ENST00000390980 HEXIM2Q96MH2 286 aaKnown RBP3.67□□□□□ -1.82
RNU6-578P-201ENST00000390980 PPP1R16BQ96T49 567 aa3.67□□□□□ -1.82
RNU6-578P-201ENST00000390980 EHD4Q9H223 541 aa3.67□□□□□ -1.82
RNU6-578P-201ENST00000390980 CTNND2Q9UQB3 1225 aa3.67□□□□□ -1.82
RNU6-578P-201ENST00000390980 PCDHGC5Q9Y5F6 944 aa3.67□□□□□ -1.82
RNU6-578P-201ENST00000390980 B8ZZF3 427 aa3.66□□□□□ -1.82
RNU6-578P-201ENST00000390980 ZNF157P51786 506 aaPredicted RBP3.66□□□□□ -1.82
RNU6-578P-201ENST00000390980 PTPN12Q05209 780 aaKnown RBP3.66□□□□□ -1.82
RNU6-578P-201ENST00000390980 IKZF1Q13422 519 aa3.66□□□□□ -1.82
RNU6-578P-201ENST00000390980 SF3B2Q13435 895 aaKnown RBP3.66□□□□□ -1.82
RNU6-578P-201ENST00000390980 ECM1Q16610 540 aa3.66□□□□□ -1.82
RNU6-578P-201ENST00000390980 KIF4BQ2VIQ3 1234 aa3.66□□□□□ -1.82
RNU6-578P-201ENST00000390980 PRR23BQ6ZRT6 265 aa3.66□□□□□ -1.82
RNU6-578P-201ENST00000390980 FAM214BQ7L5A3 538 aa3.66□□□□□ -1.82
RNU6-578P-201ENST00000390980 ASB11Q8WXH4 323 aa3.66□□□□□ -1.82
RNU6-578P-201ENST00000390980 LMCD1Q9NZU5 365 aa3.66□□□□□ -1.82
RNU6-578P-201ENST00000390980 KRT1P04264 644 aa3.65□□□□□ -1.83
RNU6-578P-201ENST00000390980 NEFMP07197 916 aa3.65□□□□□ -1.83
RNU6-578P-201ENST00000390980 GSTP1P09211 210 aaKnown RBP3.65□□□□□ -1.83
RNU6-578P-201ENST00000390980 C1QTNF9P0C862 333 aa3.65□□□□□ -1.83
RNU6-578P-201ENST00000390980 BUD31P41223 144 aaPredicted RBP3.65□□□□□ -1.83
RNU6-578P-201ENST00000390980 AFMP43652 599 aa3.65□□□□□ -1.83
RNU6-578P-201ENST00000390980 FAAP100Q0VG06 881 aa3.65□□□□□ -1.83
RNU6-578P-201ENST00000390980 RPS26P11Q5JNZ5 115 aaPredicted RBP3.65□□□□□ -1.83
RNU6-578P-201ENST00000390980 TTLL10Q6ZVT0 673 aa3.65□□□□□ -1.83
RNU6-578P-201ENST00000390980 ISL2Q96A47 359 aa3.65□□□□□ -1.83
RNU6-578P-201ENST00000390980 KRTAP9-3Q9BYQ3 159 aa3.65□□□□□ -1.83
RNU6-578P-201ENST00000390980 ABCB6Q9NP58 842 aa3.65□□□□□ -1.83
RNU6-578P-201ENST00000390980 SSU72Q9NP77 194 aaKnown RBP3.65□□□□□ -1.83
RNU6-578P-201ENST00000390980 NPHS2Q9NP85 383 aa3.65□□□□□ -1.83
RNU6-578P-201ENST00000390980 ANO2Q9NQ90 1003 aa3.65□□□□□ -1.83
RNU6-578P-201ENST00000390980 KRT82Q9NSB4 513 aa3.65□□□□□ -1.83
RNU6-578P-201ENST00000390980 GLI1P08151 1106 aa3.64□□□□□ -1.83
RNU6-578P-201ENST00000390980 MPZL3Q6UWV2 235 aa3.64□□□□□ -1.83
RNU6-578P-201ENST00000390980 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.64□□□□□ -1.83
RNU6-578P-201ENST00000390980 SPACA3Q8IXA5 215 aa3.64□□□□□ -1.83
RNU6-578P-201ENST00000390980 TMEM238LA0A1B0GVL6 79 aa3.63□□□□□ -1.83
RNU6-578P-201ENST00000390980 TMEM88BA6NKF7 163 aa3.63□□□□□ -1.83
RNU6-578P-201ENST00000390980 IGF2BP3O00425 579 aaKnown RBP eCLIP3.63□□□□□ -1.83
RNU6-578P-201ENST00000390980 NFIBO00712 420 aa3.63□□□□□ -1.83
RNU6-578P-201ENST00000390980 ABL1P00519 1130 aa3.63□□□□□ -1.83
RNU6-578P-201ENST00000390980 NEFLP07196 543 aa3.63□□□□□ -1.83
RNU6-578P-201ENST00000390980 HNRNPUQ00839 825 aaKnown RBP eCLIP3.63□□□□□ -1.83
RNU6-578P-201ENST00000390980 ZNF211Q13398 564 aaPredicted RBP3.63□□□□□ -1.83
RNU6-578P-201ENST00000390980 ORC1Q13415 861 aa3.63□□□□□ -1.83
RNU6-578P-201ENST00000390980 NKPD1Q17RQ9 610 aa3.63□□□□□ -1.83
RNU6-578P-201ENST00000390980 TMEM67Q5HYA8 995 aa3.63□□□□□ -1.83
RNU6-578P-201ENST00000390980 PRPF40BQ6NWY9 871 aaKnown RBP3.63□□□□□ -1.83
RNU6-578P-201ENST00000390980 PDZD3Q86UT5 571 aa3.63□□□□□ -1.83
RNU6-578P-201ENST00000390980 KCNB2Q92953 911 aa3.63□□□□□ -1.83
RNU6-578P-201ENST00000390980 KIRREL1Q96J84 757 aa3.63□□□□□ -1.83
RNU6-578P-201ENST00000390980 GTF2IRD1Q9UHL9 959 aa3.63□□□□□ -1.83
RNU6-578P-201ENST00000390980 RAPGEFL1Q9UHV5 662 aa3.63□□□□□ -1.83
RNU6-578P-201ENST00000390980 MTMR7Q9Y216 660 aa3.63□□□□□ -1.83
RNU6-578P-201ENST00000390980 CPNE3O75131 537 aaKnown RBP3.62□□□□□ -1.83
RNU6-578P-201ENST00000390980 ZC3H12AQ5D1E8 599 aaKnown RBP3.62□□□□□ -1.83
RNU6-578P-201ENST00000390980 PHLDB3Q6NSJ2 640 aa3.62□□□□□ -1.83
RNU6-578P-201ENST00000390980 CYFIP1Q7L576 1253 aa3.62□□□□□ -1.83
RNU6-578P-201ENST00000390980 AMIGO3Q86WK7 504 aa3.62□□□□□ -1.83
RNU6-578P-201ENST00000390980 FBXO15Q8NCQ5 510 aaPredicted RBP3.62□□□□□ -1.83
RNU6-578P-201ENST00000390980 RNF214Q8ND24 703 aa3.62□□□□□ -1.83
RNU6-578P-201ENST00000390980 CCDC97Q96F63 343 aaPredicted RBP3.62□□□□□ -1.83
RNU6-578P-201ENST00000390980 PRDM10Q9NQV6 1147 aa3.62□□□□□ -1.83
RNU6-578P-201ENST00000390980 BRPF3Q9ULD4 1205 aa3.62□□□□□ -1.83
RNU6-578P-201ENST00000390980 PITPNM2Q9BZ72 1349 aa3.62□□□□□ -1.83
RNU6-578P-201ENST00000390980 NPIPB6E9PJ23 425 aa3.61□□□□□ -1.83
RNU6-578P-201ENST00000390980 GADD45BO75293 160 aaPredicted RBP3.61□□□□□ -1.83
RNU6-578P-201ENST00000390980 INHBBP09529 407 aa3.61□□□□□ -1.83
RNU6-578P-201ENST00000390980 CLCN7P51798 805 aa3.61□□□□□ -1.83
RNU6-578P-201ENST00000390980 ERVK-24P63145 666 aa3.61□□□□□ -1.83
RNU6-578P-201ENST00000390980 PPP2R3AQ06190 1150 aa3.61□□□□□ -1.83
RNU6-578P-201ENST00000390980 STK35Q8TDR2 534 aa3.61□□□□□ -1.83
RNU6-578P-201ENST00000390980 CCDC74AQ96AQ1 378 aa3.61□□□□□ -1.83
RNU6-578P-201ENST00000390980 DIRC2Q96SL1 478 aa3.61□□□□□ -1.83
RNU6-578P-201ENST00000390980 NSUN3Q9H649 340 aaKnown RBP3.61□□□□□ -1.83
RNU6-578P-201ENST00000390980 CARS2Q9HA77 564 aaKnown RBP3.61□□□□□ -1.83
RNU6-578P-201ENST00000390980 TMEM39AQ9NV64 488 aa3.61□□□□□ -1.83
RNU6-578P-201ENST00000390980 C19orf73Q9NVV2 129 aa3.61□□□□□ -1.83
RNU6-578P-201ENST00000390980 SERPINA10Q9UK55 444 aa3.61□□□□□ -1.83
RNU6-578P-201ENST00000390980 GNAT3A8MTJ3 354 aa3.6□□□□□ -1.83
RNU6-578P-201ENST00000390980 TMEM253P0C7T8 217 aa3.6□□□□□ -1.83
RNU6-578P-201ENST00000390980 GDNFP39905 211 aa3.6□□□□□ -1.83
RNU6-578P-201ENST00000390980 GRM2Q14416 872 aa3.6□□□□□ -1.83
RNU6-578P-201ENST00000390980 MAP1SQ66K74 1059 aaPredicted RBP3.6□□□□□ -1.83
RNU6-578P-201ENST00000390980 KRTAP17-1Q9BYP8 105 aa3.6□□□□□ -1.83
RNU6-578P-201ENST00000390980 KCNK12Q9HB15 430 aa3.6□□□□□ -1.83
RNU6-578P-201ENST00000390980 CD320Q9NPF0 282 aa3.6□□□□□ -1.83
RNU6-578P-201ENST00000390980 GPN3Q9UHW5 284 aaPredicted RBP3.6□□□□□ -1.83
RNU6-578P-201ENST00000390980 TRAK1Q9UPV9 953 aa3.6□□□□□ -1.83
RNU6-578P-201ENST00000390980 EIF1AYO14602 144 aaKnown RBP3.59□□□□□ -1.83
RNU6-578P-201ENST00000390980 ICMTO60725 284 aa3.59□□□□□ -1.83
RNU6-578P-201ENST00000390980 EOMESO95936 686 aa3.59□□□□□ -1.83
RNU6-578P-201ENST00000390980 ARNTP27540 789 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms