RNA–Protein interactions for RNA: ENST00000390446.3

TRAV18-201, Transcript of T cell receptor alpha variable 18, humanhuman

APPRIS P1 BASIC

Gene TRAV18, Length 440 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18-201ENST00000390446 SLC45A1Q9Y2W3 748 aa12.23□□□□□ -0.45
TRAV18-201ENST00000390446 NFIAQ12857 509 aa12.22□□□□□ -0.45
TRAV18-201ENST00000390446 ZNF697Q5TEC3 545 aa12.22□□□□□ -0.45
TRAV18-201ENST00000390446 CCAR1Q8IX12 1150 aaKnown RBP12.22□□□□□ -0.45
TRAV18-201ENST00000390446 AFG3L2Q9Y4W6 797 aa12.22□□□□□ -0.45
TRAV18-201ENST00000390446 PDE8BO95263 885 aa12.21□□□□□ -0.45
TRAV18-201ENST00000390446 LDHBP07195 334 aaKnown RBP12.21□□□□□ -0.45
TRAV18-201ENST00000390446 PABPC4Q13310 644 aaKnown RBP eCLIP12.21□□□□□ -0.45
TRAV18-201ENST00000390446 DIXDC1Q155Q3 683 aa12.21□□□□□ -0.45
TRAV18-201ENST00000390446 LRRC24Q50LG9 513 aa12.21□□□□□ -0.45
TRAV18-201ENST00000390446 SRCIN1Q9C0H9 1055 aa12.21□□□□□ -0.45
TRAV18-201ENST00000390446 PRDM6Q9NQX0 595 aa12.21□□□□□ -0.45
TRAV18-201ENST00000390446 PRKAG2Q9UGJ0 569 aa12.21□□□□□ -0.45
TRAV18-201ENST00000390446 AGTPBP1Q9UPW5 1226 aa12.21□□□□□ -0.45
TRAV18-201ENST00000390446 DAGLAQ9Y4D2 1042 aa12.21□□□□□ -0.45
TRAV18-201ENST00000390446 MGAMO43451 1857 aa12.21□□□□□ -0.46
TRAV18-201ENST00000390446 SLC5A1P13866 664 aa12.2□□□□□ -0.46
TRAV18-201ENST00000390446 CYP2B6P20813 491 aa12.2□□□□□ -0.46
TRAV18-201ENST00000390446 GCLCP48506 637 aaPredicted RBP12.2□□□□□ -0.46
TRAV18-201ENST00000390446 TRIM32Q13049 653 aa12.2□□□□□ -0.46
TRAV18-201ENST00000390446 FAM110CQ1W6H9 321 aa12.2□□□□□ -0.46
TRAV18-201ENST00000390446 SUCLG2Q96I99 432 aa12.2□□□□□ -0.46
TRAV18-201ENST00000390446 CWC22Q9HCG8 908 aaKnown RBP12.2□□□□□ -0.46
TRAV18-201ENST00000390446 GNL3LQ9NVN8 582 aaKnown RBP12.2□□□□□ -0.46
TRAV18-201ENST00000390446 A0A1B0GUL6 1792 aa12.2□□□□□ -0.46
TRAV18-201ENST00000390446 CTNND1O60716 968 aaKnown RBP12.19□□□□□ -0.46
TRAV18-201ENST00000390446 ALDH1L1O75891 902 aa12.19□□□□□ -0.46
TRAV18-201ENST00000390446 RGS3P49796 1198 aa12.19□□□□□ -0.46
TRAV18-201ENST00000390446 PICALMQ13492 652 aa12.19□□□□□ -0.46
TRAV18-201ENST00000390446 PUM3Q15397 648 aaKnown RBP12.19□□□□□ -0.46
TRAV18-201ENST00000390446 FAM109BQ6ICB4 259 aaPredicted RBP12.19□□□□□ -0.46
TRAV18-201ENST00000390446 ZFPM1Q8IX07 1006 aa12.19□□□□□ -0.46
TRAV18-201ENST00000390446 SYMPKQ92797 1274 aaKnown RBP12.19□□□□□ -0.46
TRAV18-201ENST00000390446 GUCD1Q96NT3 240 aa12.19□□□□□ -0.46
TRAV18-201ENST00000390446 FAM198AQ9UFP1 575 aa12.19□□□□□ -0.46
TRAV18-201ENST00000390446 OGDHLQ9ULD0 1010 aa12.19□□□□□ -0.46
TRAV18-201ENST00000390446 BRCA2P51587 3418 aa12.18□□□□□ -0.46
TRAV18-201ENST00000390446 PHF20L1A8MW92 1017 aa12.18□□□□□ -0.46
TRAV18-201ENST00000390446 VAMP4O75379 141 aa12.18□□□□□ -0.46
TRAV18-201ENST00000390446 PRKAR2AP13861 404 aaKnown RBP12.18□□□□□ -0.46
TRAV18-201ENST00000390446 PDE3AQ14432 1141 aa12.18□□□□□ -0.46
TRAV18-201ENST00000390446 TREML2Q5T2D2 321 aa12.18□□□□□ -0.46
TRAV18-201ENST00000390446 CCDC84Q86UT8 332 aaPredicted RBP12.18□□□□□ -0.46
TRAV18-201ENST00000390446 WWC1Q8IX03 1113 aa12.18□□□□□ -0.46
TRAV18-201ENST00000390446 MAFAQ8NHW3 353 aaPredicted RBP12.18□□□□□ -0.46
TRAV18-201ENST00000390446 SALL2Q9Y467 1007 aaPredicted RBP12.18□□□□□ -0.46
TRAV18-201ENST00000390446 SZT2Q5T011 3432 aa12.17□□□□□ -0.46
TRAV18-201ENST00000390446 POTEB2H3BUK9 544 aa12.17□□□□□ -0.46
TRAV18-201ENST00000390446 ENTPD3O75355 529 aa12.17□□□□□ -0.46
TRAV18-201ENST00000390446 PRDX5P30044 214 aa12.17□□□□□ -0.46
TRAV18-201ENST00000390446 EXOSC9Q06265 439 aaKnown RBP12.17□□□□□ -0.46
TRAV18-201ENST00000390446 SPP2Q13103 211 aa12.17□□□□□ -0.46
TRAV18-201ENST00000390446 KLHDC4Q8TBB5 520 aa12.17□□□□□ -0.46
TRAV18-201ENST00000390446 NUDT12Q9BQG2 462 aa12.17□□□□□ -0.46
TRAV18-201ENST00000390446 BICC1Q9H694 974 aaKnown RBP12.17□□□□□ -0.46
TRAV18-201ENST00000390446 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRAV18-201ENST00000390446 NBPF7P0C2Y1 421 aaPredicted RBP12.16□□□□□ -0.46
TRAV18-201ENST00000390446 ZKSCAN1P17029 563 aaPredicted RBP12.16□□□□□ -0.46
TRAV18-201ENST00000390446 HMGCS2P54868 508 aa12.16□□□□□ -0.46
TRAV18-201ENST00000390446 IRX3P78415 501 aaPredicted RBP12.16□□□□□ -0.46
TRAV18-201ENST00000390446 LRRC26Q2I0M4 334 aa12.16□□□□□ -0.46
TRAV18-201ENST00000390446 DZIP1Q86YF9 867 aaKnown RBP12.16□□□□□ -0.46
TRAV18-201ENST00000390446 SLF2Q8IX21 1173 aa12.16□□□□□ -0.46
TRAV18-201ENST00000390446 TRMT44Q8IYL2 757 aaKnown RBP12.16□□□□□ -0.46
TRAV18-201ENST00000390446 PROCA1Q8NCQ7 364 aaPredicted RBP12.16□□□□□ -0.46
TRAV18-201ENST00000390446 TRIB2Q92519 343 aa12.16□□□□□ -0.46
TRAV18-201ENST00000390446 LPIN2Q92539 896 aa12.16□□□□□ -0.46
TRAV18-201ENST00000390446 CDX2Q99626 313 aaPredicted RBP12.16□□□□□ -0.46
TRAV18-201ENST00000390446 SENP6Q9GZR1 1112 aaPredicted RBP12.16□□□□□ -0.46
TRAV18-201ENST00000390446 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.16□□□□□ -0.46
TRAV18-201ENST00000390446 PFASO15067 1338 aa12.15□□□□□ -0.46
TRAV18-201ENST00000390446 FANCIQ9NVI1 1328 aa12.15□□□□□ -0.46
TRAV18-201ENST00000390446 COL9A1P20849 921 aa12.15□□□□□ -0.46
TRAV18-201ENST00000390446 CCDC27Q2M243 656 aa12.15□□□□□ -0.46
TRAV18-201ENST00000390446 ASCC2Q9H1I8 757 aaPredicted RBP12.15□□□□□ -0.46
TRAV18-201ENST00000390446 GJD2Q9UKL4 321 aa12.15□□□□□ -0.46
TRAV18-201ENST00000390446 ALPK3Q96L96 1907 aa12.15□□□□□ -0.46
TRAV18-201ENST00000390446 DDX60LQ5H9U9 1706 aaKnown RBP12.14□□□□□ -0.47
TRAV18-201ENST00000390446 IL16Q14005 1332 aa12.14□□□□□ -0.47
TRAV18-201ENST00000390446 DDTLA6NHG4 134 aaPredicted RBP12.14□□□□□ -0.47
TRAV18-201ENST00000390446 CNGA1P29973 690 aa12.14□□□□□ -0.47
TRAV18-201ENST00000390446 ATN1P54259 1190 aaPredicted RBP12.14□□□□□ -0.47
TRAV18-201ENST00000390446 NCBP3Q53F19 620 aaKnown RBP12.14□□□□□ -0.47
TRAV18-201ENST00000390446 ZGPATQ8N5A5 531 aaKnown RBP12.14□□□□□ -0.47
TRAV18-201ENST00000390446 ZNF280CQ8ND82 737 aa12.14□□□□□ -0.47
TRAV18-201ENST00000390446 IDI2Q9BXS1 227 aa12.14□□□□□ -0.47
TRAV18-201ENST00000390446 PRKRIP1Q9H875 184 aaPredicted RBP12.14□□□□□ -0.47
TRAV18-201ENST00000390446 AS3MTQ9HBK9 375 aa12.14□□□□□ -0.47
TRAV18-201ENST00000390446 TMOD4Q9NZQ9 345 aa12.14□□□□□ -0.47
TRAV18-201ENST00000390446 ABCF2Q9UG63 623 aa12.14□□□□□ -0.47
TRAV18-201ENST00000390446 DENND2AQ9ULE3 1009 aa12.14□□□□□ -0.47
TRAV18-201ENST00000390446 KIF16BQ96L93 1317 aa12.13□□□□□ -0.47
TRAV18-201ENST00000390446 SLURP2P0DP57 97 aa12.13□□□□□ -0.47
TRAV18-201ENST00000390446 FOSL2P15408 326 aa12.13□□□□□ -0.47
TRAV18-201ENST00000390446 CACNB2Q08289 660 aaPredicted RBP12.13□□□□□ -0.47
TRAV18-201ENST00000390446 VGLL2Q8N8G2 317 aa12.13□□□□□ -0.47
TRAV18-201ENST00000390446 GPRC5AQ8NFJ5 357 aa12.13□□□□□ -0.47
TRAV18-201ENST00000390446 SOCS4Q8WXH5 440 aa12.13□□□□□ -0.47
TRAV18-201ENST00000390446 MYLIPQ8WY64 445 aa12.13□□□□□ -0.47
TRAV18-201ENST00000390446 KAZALD1Q96I82 304 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms