RNA–Protein interactions for RNA: ENST00000390398.3

TRBV25-1-202, Transcript of T cell receptor beta variable 25-1, humanhuman

APPRIS P1 BASIC

Gene TRBV25-1, Length 381 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1-202ENST00000390398 INCENPQ9NQS7 918 aa8.62□□□□□ -1.03
TRBV25-1-202ENST00000390398 ANAPC4Q9UJX5 808 aa8.62□□□□□ -1.03
TRBV25-1-202ENST00000390398 MYO3BQ8WXR4 1341 aa8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 MINDY4BA8MYZ0 360 aa8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 USP17L12C9JPN9 530 aa8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 USP17L21D6R901 530 aa8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 HMGB1P09429 215 aaKnown RBP8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 USP17L8P0C7I0 530 aa8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 CYP2D6P10635 497 aa8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 PLCG2P16885 1265 aa8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 YBX3P16989 372 aaKnown RBP eCLIP8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 USP5P45974 858 aa8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 TOB2Q14106 344 aaPredicted RBP8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 SBK1Q52WX2 424 aa8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 AKNAD1Q5T1N1 836 aa8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 CDC42EP5Q6NZY7 148 aa8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 NOL8Q76FK4 1167 aaKnown RBP8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 CERS3Q8IU89 383 aa8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 TEX11Q8IYF3 940 aa8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 NCOA7Q8NI08 942 aa8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 STAG1Q8WVM7 1258 aa8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 TMX3Q96JJ7 454 aa8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 LARP6Q9BRS8 491 aaKnown RBP8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 DAXXQ9UER7 740 aaPredicted RBP8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 SERPINA10Q9UK55 444 aa8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 ZBTB12Q9Y330 459 aaPredicted RBP8.61□□□□□ -1.03
TRBV25-1-202ENST00000390398 FLT1P17948 1338 aa8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 B4E1Z4 1266 aa8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 FZD9O00144 591 aa8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 WDHD1O75717 1129 aaPredicted RBP8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 LARGE1O95461 756 aa8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 FGRP09769 529 aa8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 ANTXR2P58335 489 aa8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 C12orf60Q5U649 245 aa8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 CIAPIN1Q6FI81 312 aa8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 Q6ZUG5 572 aa8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 ARHGAP27Q6ZUM4 889 aa8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 CYB5R4Q7L1T6 521 aa8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 CHST3Q7LGC8 479 aa8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 MAPKAPK5Q8IW41 473 aa8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 STK11IPQ8N1F8 1099 aa8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 SPRYD3Q8NCJ5 442 aa8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 JDP2Q8WYK2 163 aa8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 LRRC2Q9BYS8 371 aa8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 AGXT2Q9BYV1 514 aa8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 USP40Q9NVE5 1235 aa8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 RNF216Q9NWF9 866 aaPredicted RBP8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 MCM9Q9NXL9 1143 aa8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 ARPP21Q9UBL0 812 aaPredicted RBP8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 SAP30BPQ9UHR5 308 aaKnown RBP8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 TPCN1Q9ULQ1 816 aa8.6□□□□□ -1.03
TRBV25-1-202ENST00000390398 WDR19Q8NEZ3 1342 aa8.59□□□□□ -1.03
TRBV25-1-202ENST00000390398 PRC1O43663 620 aa8.59□□□□□ -1.03
TRBV25-1-202ENST00000390398 MCM5P33992 734 aa8.59□□□□□ -1.03
TRBV25-1-202ENST00000390398 PLCD1P51178 756 aa8.59□□□□□ -1.03
TRBV25-1-202ENST00000390398 ST3GAL1Q11201 340 aa8.59□□□□□ -1.03
TRBV25-1-202ENST00000390398 NFIAQ12857 509 aa8.59□□□□□ -1.03
TRBV25-1-202ENST00000390398 CUL4AQ13619 759 aa8.59□□□□□ -1.03
TRBV25-1-202ENST00000390398 SLC4A8Q2Y0W8 1093 aa8.59□□□□□ -1.03
TRBV25-1-202ENST00000390398 CFAP100Q494V2 611 aa8.59□□□□□ -1.03
TRBV25-1-202ENST00000390398 MFSD6Q6ZSS7 791 aa8.59□□□□□ -1.03
TRBV25-1-202ENST00000390398 RALYLQ86SE5 291 aaKnown RBP8.59□□□□□ -1.03
TRBV25-1-202ENST00000390398 FBXL16Q8N461 479 aa8.59□□□□□ -1.03
TRBV25-1-202ENST00000390398 AGBL3Q8NEM8 1001 aa8.59□□□□□ -1.03
TRBV25-1-202ENST00000390398 PRMT6Q96LA8 375 aaPredicted RBP8.59□□□□□ -1.03
TRBV25-1-202ENST00000390398 DDX4Q9NQI0 724 aaKnown RBP8.59□□□□□ -1.03
TRBV25-1-202ENST00000390398 GPHNQ9NQX3 736 aaPredicted RBP8.59□□□□□ -1.03
TRBV25-1-202ENST00000390398 ZSWIM5Q9P217 1185 aa8.59□□□□□ -1.03
TRBV25-1-202ENST00000390398 LIMCH1Q9UPQ0 1083 aa8.59□□□□□ -1.03
TRBV25-1-202ENST00000390398 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.59□□□□□ -1.03
TRBV25-1-202ENST00000390398 ROBO3Q96MS0 1386 aa8.59□□□□□ -1.03
TRBV25-1-202ENST00000390398 ZNF541Q9H0D2 1346 aa8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 UTRNP46939 3433 aa8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 SHTN1A0MZ66 631 aa8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 NPM3O75607 178 aaKnown RBP8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 PCP11498 1178 aaKnown RBP8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 LMNB1P20700 586 aa8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 DDIT3P35638 169 aa8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 RBM5P52756 815 aaKnown RBP eCLIP8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 CACNB3P54284 484 aa8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 TRDNQ13061 729 aa8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 PICALMQ13492 652 aa8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 TNIP1Q15025 636 aa8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 ANKRD1Q15327 319 aa8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 ME3Q16798 604 aa8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 RRP12Q5JTH9 1297 aaKnown RBP8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 BRF1Q92994 677 aa8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 KRT23Q9C075 422 aa8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 RNF41Q9H4P4 317 aaPredicted RBP8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 TDRD3Q9H7E2 651 aaKnown RBP8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 CNNM2Q9H8M5 875 aa8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 FOXD4L1Q9NU39 408 aa8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 FAM198AQ9UFP1 575 aa8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 HDAC9Q9UKV0 1011 aa8.58□□□□□ -1.04
TRBV25-1-202ENST00000390398 GREB1LQ9C091 1923 aaPredicted RBP8.57□□□□□ -1.04
TRBV25-1-202ENST00000390398 SPDYE2BA6NHP3 402 aa8.57□□□□□ -1.04
TRBV25-1-202ENST00000390398 SH2B2O14492 632 aaPredicted RBP8.57□□□□□ -1.04
TRBV25-1-202ENST00000390398 SOCS7O14512 581 aa8.57□□□□□ -1.04
TRBV25-1-202ENST00000390398 ORC4O43929 436 aa8.57□□□□□ -1.04
TRBV25-1-202ENST00000390398 KDM4AO75164 1064 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms