RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 DUOX1Q9NRD9 1551 aa21.24■□□□□ 0.99
ACTN4-202ENST00000390009 GIMAP6Q6P9H5 292 aa21.23■□□□□ 0.99
ACTN4-202ENST00000390009 TMED8Q6PL24 325 aaPredicted RBP21.23■□□□□ 0.99
ACTN4-202ENST00000390009 LAMB1P07942 1786 aa21.23■□□□□ 0.99
ACTN4-202ENST00000390009 ERICH2A1L162 156 aa21.23■□□□□ 0.99
ACTN4-202ENST00000390009 SMIM22K7EJ46 135 aa21.23■□□□□ 0.99
ACTN4-202ENST00000390009 GPSM2P81274 684 aa21.23■□□□□ 0.99
ACTN4-202ENST00000390009 CEBPZQ03701 1054 aaKnown RBP21.23■□□□□ 0.99
ACTN4-202ENST00000390009 WTAPQ15007 396 aa21.23■□□□□ 0.99
ACTN4-202ENST00000390009 SPTY2D1Q68D10 685 aaPredicted RBP21.23■□□□□ 0.99
ACTN4-202ENST00000390009 RNF214Q8ND24 703 aa21.23■□□□□ 0.99
ACTN4-202ENST00000390009 TDRD7Q8NHU6 1098 aaKnown RBP21.23■□□□□ 0.99
ACTN4-202ENST00000390009 ZNF396Q96N95 335 aaPredicted RBP21.23■□□□□ 0.99
ACTN4-202ENST00000390009 NTRK3Q16288 839 aa21.22■□□□□ 0.99
ACTN4-202ENST00000390009 ZNF772Q68DY9 489 aaPredicted RBP21.22■□□□□ 0.99
ACTN4-202ENST00000390009 C15orf52Q6ZUT6 534 aaKnown RBP21.22■□□□□ 0.99
ACTN4-202ENST00000390009 ZNF804AQ7Z570 1209 aa21.22■□□□□ 0.99
ACTN4-202ENST00000390009 USP28Q96RU2 1077 aa21.22■□□□□ 0.99
ACTN4-202ENST00000390009 PPP1R9BQ96SB3 815 aa21.22■□□□□ 0.99
ACTN4-202ENST00000390009 FTOQ9C0B1 505 aaKnown RBP eCLIP21.22■□□□□ 0.998e-20■■□□□ 11.6
ACTN4-202ENST00000390009 FAM217BQ9NTX9 383 aaPredicted RBP21.22■□□□□ 0.99
ACTN4-202ENST00000390009 SYNE3Q6ZMZ3 975 aa21.22■□□□□ 0.99
ACTN4-202ENST00000390009 DZIP1Q86YF9 867 aaKnown RBP21.22■□□□□ 0.99
ACTN4-202ENST00000390009 KLHL34Q8N239 644 aa21.22■□□□□ 0.99
ACTN4-202ENST00000390009 WDR66Q8TBY9 1149 aa21.22■□□□□ 0.99
ACTN4-202ENST00000390009 ESR2Q92731 530 aa21.22■□□□□ 0.99
ACTN4-202ENST00000390009 GPR101Q96P66 508 aaPredicted RBP21.22■□□□□ 0.99
ACTN4-202ENST00000390009 CRNKL1Q9BZJ0 848 aaKnown RBP21.22■□□□□ 0.99
ACTN4-202ENST00000390009 GJB4Q9NTQ9 266 aa21.22■□□□□ 0.99
ACTN4-202ENST00000390009 RCOR1Q9UKL0 485 aa21.22■□□□□ 0.99
ACTN4-202ENST00000390009 NID2Q14112 1375 aa21.21■□□□□ 0.99
ACTN4-202ENST00000390009 CYP2D7A0A087X1C5 515 aa21.21■□□□□ 0.99
ACTN4-202ENST00000390009 CTR9Q6PD62 1173 aa21.21■□□□□ 0.99
ACTN4-202ENST00000390009 RGS22Q8NE09 1264 aa21.21■□□□□ 0.99
ACTN4-202ENST00000390009 PHKBQ93100 1093 aa21.21■□□□□ 0.99
ACTN4-202ENST00000390009 TMTC2Q8N394 836 aa21.2■□□□□ 0.98
ACTN4-202ENST00000390009 BICD2Q8TD16 824 aa21.2■□□□□ 0.98
ACTN4-202ENST00000390009 UBAC1Q9BSL1 405 aa21.2■□□□□ 0.98
ACTN4-202ENST00000390009 ANKRD31Q8N7Z5 1873 aa21.2■□□□□ 0.98
ACTN4-202ENST00000390009 PLSCR1O15162 318 aa21.2■□□□□ 0.98
ACTN4-202ENST00000390009 BBOX1O75936 387 aa21.2■□□□□ 0.98
ACTN4-202ENST00000390009 UFL1O94874 794 aa21.2■□□□□ 0.98
ACTN4-202ENST00000390009 HOXA10P31260 410 aaPredicted RBP21.2■□□□□ 0.98
ACTN4-202ENST00000390009 ZNF827Q17R98 1081 aa21.2■□□□□ 0.98
ACTN4-202ENST00000390009 ALG1Q9BT22 464 aa21.2■□□□□ 0.98
ACTN4-202ENST00000390009 DCP1AQ9NPI6 582 aaPredicted RBP21.2■□□□□ 0.98
ACTN4-202ENST00000390009 DACT1Q9NYF0 836 aa21.2■□□□□ 0.98
ACTN4-202ENST00000390009 USP17L12C9JPN9 530 aa21.19■□□□□ 0.98
ACTN4-202ENST00000390009 USP17L21D6R901 530 aa21.19■□□□□ 0.98
ACTN4-202ENST00000390009 RANBP6O60518 1105 aaKnown RBP21.19■□□□□ 0.98
ACTN4-202ENST00000390009 LDHBP07195 334 aaKnown RBP21.19■□□□□ 0.98
ACTN4-202ENST00000390009 ATP2B4P23634 1241 aa21.19■□□□□ 0.98
ACTN4-202ENST00000390009 IARSP41252 1262 aaKnown RBP21.19■□□□□ 0.98
ACTN4-202ENST00000390009 AIFM3Q96NN9 605 aa21.19■□□□□ 0.98
ACTN4-202ENST00000390009 NUP62CLQ9H1M0 184 aa21.19■□□□□ 0.98
ACTN4-202ENST00000390009 ATP8A2Q9NTI2 1148 aa21.19■□□□□ 0.98
ACTN4-202ENST00000390009 KLRG2A4D1S0 409 aaPredicted RBP21.19■□□□□ 0.98
ACTN4-202ENST00000390009 IGSF3O75054 1194 aa21.19■□□□□ 0.98
ACTN4-202ENST00000390009 PCP11498 1178 aaKnown RBP21.19■□□□□ 0.98
ACTN4-202ENST00000390009 CRAMP1Q96RY5 1269 aa21.19■□□□□ 0.98
ACTN4-202ENST00000390009 FUCA2Q9BTY2 467 aa21.19■□□□□ 0.98
ACTN4-202ENST00000390009 GGA1Q9UJY5 639 aa21.19■□□□□ 0.98
ACTN4-202ENST00000390009 LRRC37AA6NMS7 1700 aa21.18■□□□□ 0.98
ACTN4-202ENST00000390009 FGRP09769 529 aa21.18■□□□□ 0.98
ACTN4-202ENST00000390009 BRAPQ7Z569 592 aa21.18■□□□□ 0.98
ACTN4-202ENST00000390009 DDX19AQ9NUU7 478 aaKnown RBP21.18■□□□□ 0.98
ACTN4-202ENST00000390009 TNKSO95271 1327 aa21.18■□□□□ 0.98
ACTN4-202ENST00000390009 DLEC1Q9Y238 1755 aa21.17■□□□□ 0.98
ACTN4-202ENST00000390009 APBA3O96018 575 aa21.17■□□□□ 0.98
ACTN4-202ENST00000390009 POLR3DP05423 398 aaPredicted RBP21.17■□□□□ 0.98
ACTN4-202ENST00000390009 KIF23Q02241 960 aaPredicted RBP21.17■□□□□ 0.98
ACTN4-202ENST00000390009 SEC23AQ15436 765 aa21.17■□□□□ 0.98
ACTN4-202ENST00000390009 STK36Q9NRP7 1315 aa21.17■□□□□ 0.98
ACTN4-202ENST00000390009 RCAN1P53805 252 aa21.17■□□□□ 0.98
ACTN4-202ENST00000390009 RTN1Q16799 776 aa21.17■□□□□ 0.98
ACTN4-202ENST00000390009 ZNF654Q8IZM8 581 aa21.17■□□□□ 0.98
ACTN4-202ENST00000390009 AKT1S1Q96B36 256 aa21.17■□□□□ 0.98
ACTN4-202ENST00000390009 TRIM44Q96DX7 344 aaPredicted RBP21.17■□□□□ 0.98
ACTN4-202ENST00000390009 NRXN2Q9P2S2 1712 aa21.17■□□□□ 0.98
ACTN4-202ENST00000390009 LTBP1Q14766 1721 aa21.16■□□□□ 0.98
ACTN4-202ENST00000390009 KIF28PB7ZC32 967 aa21.16■□□□□ 0.98
ACTN4-202ENST00000390009 NR1I2O75469 434 aa21.16■□□□□ 0.98
ACTN4-202ENST00000390009 IFNAR1P17181 557 aa21.16■□□□□ 0.98
ACTN4-202ENST00000390009 COL23A1Q86Y22 540 aaPredicted RBP21.16■□□□□ 0.98
ACTN4-202ENST00000390009 FAM43AQ8N2R8 423 aa21.16■□□□□ 0.98
ACTN4-202ENST00000390009 SLC26A6Q9BXS9 759 aa21.16■□□□□ 0.98
ACTN4-202ENST00000390009 CD209Q9NNX6 404 aa21.16■□□□□ 0.98
ACTN4-202ENST00000390009 PODXL2Q9NZ53 605 aa21.16■□□□□ 0.98
ACTN4-202ENST00000390009 ARPP21Q9UBL0 812 aaPredicted RBP21.16■□□□□ 0.98
ACTN4-202ENST00000390009 MYH6P13533 1939 aa21.16■□□□□ 0.98
ACTN4-202ENST00000390009 PRDM1O75626 825 aa21.16■□□□□ 0.98
ACTN4-202ENST00000390009 FMNL1O95466 1100 aaPredicted RBP21.16■□□□□ 0.98
ACTN4-202ENST00000390009 SSRP1Q08945 709 aaKnown RBP21.16■□□□□ 0.98
ACTN4-202ENST00000390009 CAMK4Q16566 473 aa21.16■□□□□ 0.98
ACTN4-202ENST00000390009 MAP3K11Q16584 847 aa21.16■□□□□ 0.98
ACTN4-202ENST00000390009 MYSM1Q5VVJ2 828 aa21.16■□□□□ 0.98
ACTN4-202ENST00000390009 KRT40Q6A162 431 aa21.16■□□□□ 0.98
ACTN4-202ENST00000390009 ZSCAN10Q96SZ4 725 aaPredicted RBP21.16■□□□□ 0.98
ACTN4-202ENST00000390009 RTEL1Q9NZ71 1219 aa21.16■□□□□ 0.98
ACTN4-202ENST00000390009 EVX2Q03828 476 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms