RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 STX8Q9UNK0 236 aa21.57■■□□□ 1.04
PPFIA1-202ENST00000389547 MPHOSPH10O00566 681 aaKnown RBP21.57■■□□□ 1.04
PPFIA1-202ENST00000389547 HSPD1P10809 573 aaKnown RBP21.57■■□□□ 1.04
PPFIA1-202ENST00000389547 RAD51AP2Q09MP3 1159 aa21.57■■□□□ 1.04
PPFIA1-202ENST00000389547 TSR1Q2NL82 804 aaKnown RBP21.57■■□□□ 1.04
PPFIA1-202ENST00000389547 TBC1D9BQ66K14 1250 aa21.57■■□□□ 1.04
PPFIA1-202ENST00000389547 CAGE1Q8TC20 777 aa21.57■■□□□ 1.04
PPFIA1-202ENST00000389547 BAG3O95817 575 aa21.56■■□□□ 1.04
PPFIA1-202ENST00000389547 RPS6KA4O75676 772 aa21.56■■□□□ 1.04
PPFIA1-202ENST00000389547 CALRP27797 417 aaKnown RBP21.56■■□□□ 1.04
PPFIA1-202ENST00000389547 SPTY2D1Q68D10 685 aaPredicted RBP21.56■■□□□ 1.04
PPFIA1-202ENST00000389547 ARHGEF1Q92888 912 aaKnown RBP21.56■■□□□ 1.04
PPFIA1-202ENST00000389547 MCM9Q9NXL9 1143 aa21.56■■□□□ 1.04
PPFIA1-202ENST00000389547 CBFA2T2O43439 604 aa21.56■■□□□ 1.04
PPFIA1-202ENST00000389547 PDE6AP16499 860 aa21.56■■□□□ 1.04
PPFIA1-202ENST00000389547 LDHCP07864 332 aa21.55■■□□□ 1.04
PPFIA1-202ENST00000389547 PICALMQ13492 652 aa21.55■■□□□ 1.04
PPFIA1-202ENST00000389547 SYCP1Q15431 976 aa21.55■■□□□ 1.04
PPFIA1-202ENST00000389547 ZNF804AQ7Z570 1209 aa21.55■■□□□ 1.04
PPFIA1-202ENST00000389547 CCDC12Q8WUD4 166 aaPredicted RBP21.55■■□□□ 1.04
PPFIA1-202ENST00000389547 AATFQ9NY61 560 aaKnown RBP eCLIP21.55■■□□□ 1.04
PPFIA1-202ENST00000389547 COL15A1P39059 1388 aa21.55■■□□□ 1.04
PPFIA1-202ENST00000389547 RABL6Q3YEC7 729 aaPredicted RBP21.55■■□□□ 1.04
PPFIA1-202ENST00000389547 BRMS1Q9HCU9 246 aa21.55■■□□□ 1.04
PPFIA1-202ENST00000389547 CHD2O14647 1828 aaKnown RBP21.55■■□□□ 1.04
PPFIA1-202ENST00000389547 LDHBP07195 334 aaKnown RBP21.55■■□□□ 1.04
PPFIA1-202ENST00000389547 SMC1AQ14683 1233 aaKnown RBP21.55■■□□□ 1.04
PPFIA1-202ENST00000389547 KCNF1Q9H3M0 494 aa21.55■■□□□ 1.04
PPFIA1-202ENST00000389547 AKAP12Q02952 1782 aa21.55■■□□□ 1.04
PPFIA1-202ENST00000389547 TRIM28Q13263 835 aaKnown RBP21.54■■□□□ 1.04
PPFIA1-202ENST00000389547 MAP4K1Q92918 833 aa21.54■■□□□ 1.04
PPFIA1-202ENST00000389547 SLC26A6Q9BXS9 759 aa21.54■■□□□ 1.04
PPFIA1-202ENST00000389547 DENND2AQ9ULE3 1009 aa21.54■■□□□ 1.04
PPFIA1-202ENST00000389547 IARSP41252 1262 aaKnown RBP21.54■■□□□ 1.04
PPFIA1-202ENST00000389547 CTDSPL2Q05D32 466 aa21.54■■□□□ 1.04
PPFIA1-202ENST00000389547 WTAPQ15007 396 aa21.54■■□□□ 1.04
PPFIA1-202ENST00000389547 ATG9AQ7Z3C6 839 aa21.54■■□□□ 1.04
PPFIA1-202ENST00000389547 RNF216Q9NWF9 866 aaPredicted RBP21.54■■□□□ 1.04
PPFIA1-202ENST00000389547 ZBTB43O43298 467 aa21.53■■□□□ 1.04
PPFIA1-202ENST00000389547 FGAP02671 866 aa21.53■■□□□ 1.04
PPFIA1-202ENST00000389547 OSBP2Q969R2 916 aa21.53■■□□□ 1.04
PPFIA1-202ENST00000389547 IFNKQ9P0W0 207 aa21.53■■□□□ 1.04
PPFIA1-202ENST00000389547 NFAT5O94916 1531 aa21.53■■□□□ 1.04
PPFIA1-202ENST00000389547 RXRBP28702 533 aa21.53■■□□□ 1.04
PPFIA1-202ENST00000389547 LINC00116Q8NCU8 138 aa21.53■■□□□ 1.04
PPFIA1-202ENST00000389547 IL25Q9H293 177 aa21.53■■□□□ 1.04
PPFIA1-202ENST00000389547 FBXO3Q9UK99 471 aa21.53■■□□□ 1.04
PPFIA1-202ENST00000389547 LMOD1P29536 600 aaPredicted RBP21.53■■□□□ 1.04
PPFIA1-202ENST00000389547 GPR108Q9NPR9 543 aa21.53■■□□□ 1.04
PPFIA1-202ENST00000389547 CYP21A2P08686 494 aa21.53■■□□□ 1.04
PPFIA1-202ENST00000389547 ME3Q16798 604 aa21.53■■□□□ 1.04
PPFIA1-202ENST00000389547 LRRC8AQ8IWT6 810 aa21.53■■□□□ 1.04
PPFIA1-202ENST00000389547 CRACR2BQ8N4Y2 399 aaPredicted RBP21.53■■□□□ 1.04
PPFIA1-202ENST00000389547 SDR42E1Q8WUS8 393 aa21.53■■□□□ 1.04
PPFIA1-202ENST00000389547 RBM17Q96I25 401 aaKnown RBP21.53■■□□□ 1.04
PPFIA1-202ENST00000389547 SERPINB2P05120 415 aa21.52■■□□□ 1.04
PPFIA1-202ENST00000389547 SCARF1Q14162 830 aa21.52■■□□□ 1.04
PPFIA1-202ENST00000389547 HSP90AA4PQ58FG1 418 aa21.52■■□□□ 1.04
PPFIA1-202ENST00000389547 CTCFLQ8NI51 663 aaPredicted RBP21.52■■□□□ 1.04
PPFIA1-202ENST00000389547 MYL10Q9BUA6 226 aa21.52■■□□□ 1.04
PPFIA1-202ENST00000389547 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.52■■□□□ 1.043e-7■■□□□ 11.9
PPFIA1-202ENST00000389547 SEC31AO94979 1220 aaKnown RBP21.52■■□□□ 1.04
PPFIA1-202ENST00000389547 CELF1Q92879 486 aaKnown RBP21.52■■□□□ 1.04
PPFIA1-202ENST00000389547 MYCBPQ99417 103 aaPredicted RBP21.52■■□□□ 1.04
PPFIA1-202ENST00000389547 SRRTQ9BXP5 876 aaKnown RBP21.52■■□□□ 1.04
PPFIA1-202ENST00000389547 E7EWF7 191 aa21.52■■□□□ 1.03
PPFIA1-202ENST00000389547 CDR1P51861 262 aa21.52■■□□□ 1.03
PPFIA1-202ENST00000389547 CT47A1Q5JQC4 288 aaPredicted RBP21.52■■□□□ 1.03
PPFIA1-202ENST00000389547 SLC4A9Q96Q91 983 aa21.52■■□□□ 1.03
PPFIA1-202ENST00000389547 SETD1AO15047 1707 aaKnown RBP21.51■■□□□ 1.03
PPFIA1-202ENST00000389547 IPO7O95373 1038 aaKnown RBP21.51■■□□□ 1.03
PPFIA1-202ENST00000389547 GPR101Q96P66 508 aaPredicted RBP21.51■■□□□ 1.03
PPFIA1-202ENST00000389547 CRACR2AQ9BSW2 395 aa21.51■■□□□ 1.03
PPFIA1-202ENST00000389547 PUS7LQ9H0K6 701 aaKnown RBP21.51■■□□□ 1.03
PPFIA1-202ENST00000389547 GGA1Q9UJY5 639 aa21.51■■□□□ 1.03
PPFIA1-202ENST00000389547 JAK2O60674 1132 aa21.51■■□□□ 1.03
PPFIA1-202ENST00000389547 BARGINQ6ZT62 677 aa21.51■■□□□ 1.03
PPFIA1-202ENST00000389547 ESR2Q92731 530 aa21.51■■□□□ 1.03
PPFIA1-202ENST00000389547 MCAMP43121 646 aa21.51■■□□□ 1.03
PPFIA1-202ENST00000389547 PTF1AQ7RTS3 328 aa21.51■■□□□ 1.03
PPFIA1-202ENST00000389547 GBP3Q9H0R5 595 aa21.51■■□□□ 1.03
PPFIA1-202ENST00000389547 NARFQ9UHQ1 456 aa21.51■■□□□ 1.03
PPFIA1-202ENST00000389547 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.51■■□□□ 1.03
PPFIA1-202ENST00000389547 MAST3O60307 1309 aa21.5■■□□□ 1.03
PPFIA1-202ENST00000389547 MRVI1Q9Y6F6 885 aa21.5■■□□□ 1.03
PPFIA1-202ENST00000389547 MYO1CO00159 1063 aa21.5■■□□□ 1.03
PPFIA1-202ENST00000389547 PDE4BQ07343 736 aa21.5■■□□□ 1.03
PPFIA1-202ENST00000389547 ARID5BQ14865 1188 aa21.5■■□□□ 1.03
PPFIA1-202ENST00000389547 CLEC4GQ6UXB4 293 aa21.5■■□□□ 1.03
PPFIA1-202ENST00000389547 CCDC91Q7Z6B0 441 aa21.5■■□□□ 1.03
PPFIA1-202ENST00000389547 VAT1LQ9HCJ6 419 aa21.5■■□□□ 1.03
PPFIA1-202ENST00000389547 PTPDC1A2A3K4 754 aa21.5■■□□□ 1.03
PPFIA1-202ENST00000389547 CLCN6P51797 869 aa21.5■■□□□ 1.03
PPFIA1-202ENST00000389547 CUL4AQ13619 759 aa21.5■■□□□ 1.03
PPFIA1-202ENST00000389547 CATIPQ7Z7H3 387 aa21.5■■□□□ 1.03
PPFIA1-202ENST00000389547 PPFIBP1Q86W92 1011 aa21.5■■□□□ 1.03
PPFIA1-202ENST00000389547 OTUD7BQ6GQQ9 843 aa21.49■■□□□ 1.03
PPFIA1-202ENST00000389547 STK32BQ9NY57 414 aa21.49■■□□□ 1.03
PPFIA1-202ENST00000389547 TPCN1Q9ULQ1 816 aa21.49■■□□□ 1.03
PPFIA1-202ENST00000389547 ZMYM1Q5SVZ6 1142 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms