RNA–Protein interactions for RNA: ENST00000384018.1

RNU6-643P-201, Transcript of RNA, U6 small nuclear 643, pseudogene, humanhuman

BASIC

Gene RNU6-643P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-643P-201ENST00000384018 NEFMP07197 916 aa3.52□□□□□ -1.85
RNU6-643P-201ENST00000384018 ZSCAN22P10073 491 aaPredicted RBP3.52□□□□□ -1.85
RNU6-643P-201ENST00000384018 KIF4BQ2VIQ3 1234 aa3.52□□□□□ -1.85
RNU6-643P-201ENST00000384018 KIAA0319Q5VV43 1072 aa3.52□□□□□ -1.85
RNU6-643P-201ENST00000384018 FYB2Q5VWT5 728 aa3.52□□□□□ -1.85
RNU6-643P-201ENST00000384018 ABCB6Q9NP58 842 aa3.52□□□□□ -1.85
RNU6-643P-201ENST00000384018 RNGTTO60942 597 aaKnown RBP3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 KRT1P04264 644 aa3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 SLFN14P0C7P3 912 aa3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 BUD31P41223 144 aaPredicted RBP3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 PTPN12Q05209 780 aaKnown RBP3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 ZP2Q05996 745 aa3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 IKZF1Q13422 519 aa3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 ECM1Q16610 540 aa3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 PRR23BQ6ZRT6 265 aa3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 TTLL10Q6ZVT0 673 aa3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 SYDE1Q6ZW31 735 aaPredicted RBP3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 ANKLE2Q86XL3 938 aa3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 SIAH1Q8IUQ4 282 aa3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 SPACA3Q8IXA5 215 aa3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 ASB11Q8WXH4 323 aa3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 ISL2Q96A47 359 aa3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 HEXIM2Q96MH2 286 aaKnown RBP3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 KRTAP17-1Q9BYP8 105 aa3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 EHD4Q9H223 541 aa3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 NPHS2Q9NP85 383 aa3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 KRT82Q9NSB4 513 aa3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 PCOLCE2Q9UKZ9 415 aa3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 SNX11Q9Y5W9 270 aa3.51□□□□□ -1.85
RNU6-643P-201ENST00000384018 GLI1P08151 1106 aa3.5□□□□□ -1.85
RNU6-643P-201ENST00000384018 GSTP1P09211 210 aaKnown RBP3.5□□□□□ -1.85
RNU6-643P-201ENST00000384018 C1QTNF9P0C862 333 aa3.5□□□□□ -1.85
RNU6-643P-201ENST00000384018 SSFA2P28290 1259 aa3.5□□□□□ -1.85
RNU6-643P-201ENST00000384018 ZNF157P51786 506 aaPredicted RBP3.5□□□□□ -1.85
RNU6-643P-201ENST00000384018 FAAP100Q0VG06 881 aa3.5□□□□□ -1.85
RNU6-643P-201ENST00000384018 ZNF211Q13398 564 aaPredicted RBP3.5□□□□□ -1.85
RNU6-643P-201ENST00000384018 SF3B2Q13435 895 aaKnown RBP3.5□□□□□ -1.85
RNU6-643P-201ENST00000384018 PRPF40BQ6NWY9 871 aaKnown RBP3.5□□□□□ -1.85
RNU6-643P-201ENST00000384018 RAPGEFL1Q9UHV5 662 aa3.5□□□□□ -1.85
RNU6-643P-201ENST00000384018 PITPNM2Q9BZ72 1349 aa3.49□□□□□ -1.85
RNU6-643P-201ENST00000384018 AFMP43652 599 aa3.49□□□□□ -1.85
RNU6-643P-201ENST00000384018 HNRNPUQ00839 825 aaKnown RBP eCLIP3.49□□□□□ -1.85
RNU6-643P-201ENST00000384018 NKPD1Q17RQ9 610 aa3.49□□□□□ -1.85
RNU6-643P-201ENST00000384018 RPS26P11Q5JNZ5 115 aaPredicted RBP3.49□□□□□ -1.85
RNU6-643P-201ENST00000384018 MPZL3Q6UWV2 235 aa3.49□□□□□ -1.85
RNU6-643P-201ENST00000384018 FAM214BQ7L5A3 538 aa3.49□□□□□ -1.85
RNU6-643P-201ENST00000384018 PDZD3Q86UT5 571 aa3.49□□□□□ -1.85
RNU6-643P-201ENST00000384018 KIRREL1Q96J84 757 aa3.49□□□□□ -1.85
RNU6-643P-201ENST00000384018 TMEM88BA6NKF7 163 aa3.48□□□□□ -1.85
RNU6-643P-201ENST00000384018 IGF2BP3O00425 579 aaKnown RBP eCLIP3.48□□□□□ -1.85
RNU6-643P-201ENST00000384018 NFIBO00712 420 aa3.48□□□□□ -1.85
RNU6-643P-201ENST00000384018 ABL1P00519 1130 aa3.48□□□□□ -1.85
RNU6-643P-201ENST00000384018 FKBP4Q02790 459 aaKnown RBP eCLIP3.48□□□□□ -1.85
RNU6-643P-201ENST00000384018 ORC1Q13415 861 aa3.48□□□□□ -1.85
RNU6-643P-201ENST00000384018 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.48□□□□□ -1.85
RNU6-643P-201ENST00000384018 SSU72Q9NP77 194 aaKnown RBP3.48□□□□□ -1.85
RNU6-643P-201ENST00000384018 ANO2Q9NQ90 1003 aa3.48□□□□□ -1.85
RNU6-643P-201ENST00000384018 C19orf73Q9NVV2 129 aa3.48□□□□□ -1.85
RNU6-643P-201ENST00000384018 GTF2IRD1Q9UHL9 959 aa3.48□□□□□ -1.85
RNU6-643P-201ENST00000384018 TMEM238LA0A1B0GVL6 79 aa3.47□□□□□ -1.85
RNU6-643P-201ENST00000384018 NPIPB6E9PJ23 425 aa3.47□□□□□ -1.85
RNU6-643P-201ENST00000384018 CPNE3O75131 537 aaKnown RBP3.47□□□□□ -1.85
RNU6-643P-201ENST00000384018 INHBBP09529 407 aa3.47□□□□□ -1.85
RNU6-643P-201ENST00000384018 CLCN7P51798 805 aa3.47□□□□□ -1.85
RNU6-643P-201ENST00000384018 ERVK-24P63145 666 aa3.47□□□□□ -1.85
RNU6-643P-201ENST00000384018 ZC3H12AQ5D1E8 599 aaKnown RBP3.47□□□□□ -1.85
RNU6-643P-201ENST00000384018 TMEM67Q5HYA8 995 aa3.47□□□□□ -1.85
RNU6-643P-201ENST00000384018 CYFIP1Q7L576 1253 aa3.47□□□□□ -1.85
RNU6-643P-201ENST00000384018 UBE3DQ7Z6J8 389 aa3.47□□□□□ -1.85
RNU6-643P-201ENST00000384018 FBXO15Q8NCQ5 510 aaPredicted RBP3.47□□□□□ -1.85
RNU6-643P-201ENST00000384018 RNF214Q8ND24 703 aa3.47□□□□□ -1.85
RNU6-643P-201ENST00000384018 KCNB2Q92953 911 aa3.47□□□□□ -1.85
RNU6-643P-201ENST00000384018 DIRC2Q96SL1 478 aa3.47□□□□□ -1.85
RNU6-643P-201ENST00000384018 NSUN3Q9H649 340 aaKnown RBP3.47□□□□□ -1.85
RNU6-643P-201ENST00000384018 CD320Q9NPF0 282 aa3.47□□□□□ -1.85
RNU6-643P-201ENST00000384018 PRDM10Q9NQV6 1147 aa3.47□□□□□ -1.85
RNU6-643P-201ENST00000384018 MTMR7Q9Y216 660 aa3.47□□□□□ -1.85
RNU6-643P-201ENST00000384018 NTF4P34130 210 aa3.46□□□□□ -1.86
RNU6-643P-201ENST00000384018 KCNA10Q16322 511 aa3.46□□□□□ -1.86
RNU6-643P-201ENST00000384018 PHLDB3Q6NSJ2 640 aa3.46□□□□□ -1.86
RNU6-643P-201ENST00000384018 AMIGO3Q86WK7 504 aa3.46□□□□□ -1.86
RNU6-643P-201ENST00000384018 STK35Q8TDR2 534 aa3.46□□□□□ -1.86
RNU6-643P-201ENST00000384018 CCDC97Q96F63 343 aaPredicted RBP3.46□□□□□ -1.86
RNU6-643P-201ENST00000384018 CARS2Q9HA77 564 aaKnown RBP3.46□□□□□ -1.86
RNU6-643P-201ENST00000384018 GPN3Q9UHW5 284 aaPredicted RBP3.46□□□□□ -1.86
RNU6-643P-201ENST00000384018 GNAT3A8MTJ3 354 aa3.45□□□□□ -1.86
RNU6-643P-201ENST00000384018 GADD45BO75293 160 aaPredicted RBP3.45□□□□□ -1.86
RNU6-643P-201ENST00000384018 EOMESO95936 686 aa3.45□□□□□ -1.86
RNU6-643P-201ENST00000384018 NEFLP07196 543 aa3.45□□□□□ -1.86
RNU6-643P-201ENST00000384018 GDNFP39905 211 aa3.45□□□□□ -1.86
RNU6-643P-201ENST00000384018 CTSWP56202 376 aa3.45□□□□□ -1.86
RNU6-643P-201ENST00000384018 GRM2Q14416 872 aa3.45□□□□□ -1.86
RNU6-643P-201ENST00000384018 SULF2Q8IWU5 870 aa3.45□□□□□ -1.86
RNU6-643P-201ENST00000384018 GPBAR1Q8TDU6 330 aa3.45□□□□□ -1.86
RNU6-643P-201ENST00000384018 CCDC74AQ96AQ1 378 aa3.45□□□□□ -1.86
RNU6-643P-201ENST00000384018 FAM129BQ96TA1 746 aa3.45□□□□□ -1.86
RNU6-643P-201ENST00000384018 KCNK12Q9HB15 430 aa3.45□□□□□ -1.86
RNU6-643P-201ENST00000384018 ATP13A1Q9HD20 1204 aa3.45□□□□□ -1.86
RNU6-643P-201ENST00000384018 TMEM39AQ9NV64 488 aa3.45□□□□□ -1.86
RNU6-643P-201ENST00000384018 BRPF3Q9ULD4 1205 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms