RNA–Protein interactions for RNA: ENST00000381337.6

THUMPD1-201, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 4,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-201ENST00000381337 CEP170Q5SW79 1584 aa12.91□□□□□ -0.34
THUMPD1-201ENST00000381337 USP27XA6NNY8 438 aa12.91□□□□□ -0.34
THUMPD1-201ENST00000381337 TAF5LO75529 589 aa12.91□□□□□ -0.34
THUMPD1-201ENST00000381337 KRT2P35908 639 aa12.91□□□□□ -0.34
THUMPD1-201ENST00000381337 ARID5AQ03989 594 aa12.91□□□□□ -0.34
THUMPD1-201ENST00000381337 IFIT1BQ5T764 474 aaKnown RBP12.91□□□□□ -0.34
THUMPD1-201ENST00000381337 SEC62Q99442 399 aaKnown RBP12.91□□□□□ -0.34
THUMPD1-201ENST00000381337 SERTAD1Q9UHV2 236 aa12.91□□□□□ -0.34
THUMPD1-201ENST00000381337 NCOA3Q9Y6Q9 1424 aa12.91□□□□□ -0.34
THUMPD1-201ENST00000381337 A0A087WUV0 522 aaPredicted RBP12.91□□□□□ -0.34
THUMPD1-201ENST00000381337 TSPY2A6NKD2 308 aa12.91□□□□□ -0.34
THUMPD1-201ENST00000381337 UBE4AQ14139 1066 aa12.91□□□□□ -0.34
THUMPD1-201ENST00000381337 IFT20Q8IY31 132 aa12.91□□□□□ -0.34
THUMPD1-201ENST00000381337 EFCAB13Q8IY85 973 aa12.91□□□□□ -0.34
THUMPD1-201ENST00000381337 TMEM87BQ96K49 555 aa12.91□□□□□ -0.34
THUMPD1-201ENST00000381337 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.91□□□□□ -0.34
THUMPD1-201ENST00000381337 CLIC4Q9Y696 253 aa12.91□□□□□ -0.34
THUMPD1-201ENST00000381337 CTIFO43310 598 aaKnown RBP12.9□□□□□ -0.34
THUMPD1-201ENST00000381337 GYS2P54840 703 aa12.9□□□□□ -0.34
THUMPD1-201ENST00000381337 ZNF174Q15697 407 aa12.9□□□□□ -0.34
THUMPD1-201ENST00000381337 ZNF827Q17R98 1081 aa12.9□□□□□ -0.34
THUMPD1-201ENST00000381337 DSCC1Q9BVC3 393 aa12.9□□□□□ -0.34
THUMPD1-201ENST00000381337 CAPS2Q9BXY5 557 aa12.9□□□□□ -0.34
THUMPD1-201ENST00000381337 SLC4A4Q9Y6R1 1079 aa12.9□□□□□ -0.34
THUMPD1-201ENST00000381337 RESTQ13127 1097 aa12.9□□□□□ -0.34
THUMPD1-201ENST00000381337 E2F4Q16254 413 aa12.9□□□□□ -0.34
THUMPD1-201ENST00000381337 ICE2Q659A1 982 aa12.9□□□□□ -0.34
THUMPD1-201ENST00000381337 BANK1Q8NDB2 785 aa12.9□□□□□ -0.34
THUMPD1-201ENST00000381337 SECISBP2LQ93073 1101 aaKnown RBP12.9□□□□□ -0.34
THUMPD1-201ENST00000381337 KIF4AO95239 1232 aa12.9□□□□□ -0.34
THUMPD1-201ENST00000381337 CETN2P41208 172 aa12.9□□□□□ -0.34
THUMPD1-201ENST00000381337 PAK1Q13153 545 aa12.9□□□□□ -0.34
THUMPD1-201ENST00000381337 ZNF444Q8N0Y2 327 aaPredicted RBP12.9□□□□□ -0.34
THUMPD1-201ENST00000381337 PSMB7Q99436 277 aa12.9□□□□□ -0.34
THUMPD1-201ENST00000381337 SAMD15Q9P1V8 674 aa12.9□□□□□ -0.34
THUMPD1-201ENST00000381337 SSR1P43307 286 aaKnown RBP12.9□□□□□ -0.35
THUMPD1-201ENST00000381337 CAVIN4Q5BKX8 364 aa12.9□□□□□ -0.35
THUMPD1-201ENST00000381337 SPTY2D1Q68D10 685 aaPredicted RBP12.9□□□□□ -0.35
THUMPD1-201ENST00000381337 SLC35F6Q8N357 371 aa12.9□□□□□ -0.35
THUMPD1-201ENST00000381337 OR8K1Q8NGG5 319 aa12.9□□□□□ -0.35
THUMPD1-201ENST00000381337 PRDM11Q9NQV5 511 aa12.9□□□□□ -0.35
THUMPD1-201ENST00000381337 MCM7P33993 719 aa12.89□□□□□ -0.35
THUMPD1-201ENST00000381337 NECTIN1Q15223 517 aa12.89□□□□□ -0.35
THUMPD1-201ENST00000381337 PTPN21Q16825 1174 aa12.89□□□□□ -0.35
THUMPD1-201ENST00000381337 CCDC50Q8IVM0 306 aa12.89□□□□□ -0.35
THUMPD1-201ENST00000381337 NSUN7Q8NE18 718 aaKnown RBP12.89□□□□□ -0.35
THUMPD1-201ENST00000381337 FBF1Q8TES7 1133 aa12.89□□□□□ -0.35
THUMPD1-201ENST00000381337 APPBP2Q92624 585 aa12.89□□□□□ -0.35
THUMPD1-201ENST00000381337 PGBD1Q96JS3 809 aa12.89□□□□□ -0.35
THUMPD1-201ENST00000381337 DEXIO95424 95 aa12.89□□□□□ -0.35
THUMPD1-201ENST00000381337 MAGEA1P43355 309 aa12.89□□□□□ -0.35
THUMPD1-201ENST00000381337 CCDC6Q16204 474 aa12.89□□□□□ -0.35
THUMPD1-201ENST00000381337 UBLCP1Q8WVY7 318 aaPredicted RBP12.89□□□□□ -0.35
THUMPD1-201ENST00000381337 CTNNBL1Q8WYA6 563 aaPredicted RBP12.89□□□□□ -0.35
THUMPD1-201ENST00000381337 STAMQ92783 540 aa12.89□□□□□ -0.35
THUMPD1-201ENST00000381337 NOC4LQ9BVI4 516 aaKnown RBP12.89□□□□□ -0.35
THUMPD1-201ENST00000381337 KAT14Q9H8E8 782 aa12.89□□□□□ -0.35
THUMPD1-201ENST00000381337 CTDP1Q9Y5B0 961 aaPredicted RBP12.89□□□□□ -0.35
THUMPD1-201ENST00000381337 CLASP1Q7Z460 1538 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 PDIA3P30101 505 aaKnown RBP12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 MAGEA9P43362 315 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 PAK2Q13177 524 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 CEP85LQ5SZL2 805 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 CC2D1AQ6P1N0 951 aaPredicted RBP12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 RGS22Q8NE09 1264 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 LRRC27Q9C0I9 530 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 HAUS4Q9H6D7 363 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 ZNF287Q9HBT7 754 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 SMIM23A6NLE4 172 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 ANKRD65E5RJM6 399 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 CCDC172P0C7W6 258 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 CALML3P27482 149 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 BEND3Q5T5X7 828 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 DTHD1Q6ZMT9 781 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 TTC14Q96N46 770 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 ZKSCAN3Q9BRR0 538 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 LGR6Q9HBX8 967 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 PLXNC1O60486 1568 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 EYA2O00167 538 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 RNF40O75150 1001 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 RNASE9P60153 205 aaKnown RBP12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 PPARDQ03181 441 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 RUFY4Q6ZNE9 571 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 LINC00301Q8NCQ3 95 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 LRRC59Q96AG4 307 aaKnown RBP12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 PLIN2Q99541 437 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 NUP58Q9BVL2 599 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 ST7Q9NRC1 585 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 TTC37Q6PGP7 1564 aa12.88□□□□□ -0.35
THUMPD1-201ENST00000381337 GPAA1O43292 621 aa12.87□□□□□ -0.35
THUMPD1-201ENST00000381337 CYP21A2P08686 494 aa12.87□□□□□ -0.35
THUMPD1-201ENST00000381337 ATP1A3P13637 1013 aa12.87□□□□□ -0.35
THUMPD1-201ENST00000381337 HOXC9P31274 260 aa12.87□□□□□ -0.35
THUMPD1-201ENST00000381337 PNMA8AQ86V59 439 aaPredicted RBP12.87□□□□□ -0.35
THUMPD1-201ENST00000381337 LMBR1Q8WVP7 490 aa12.87□□□□□ -0.35
THUMPD1-201ENST00000381337 CLIC6Q96NY7 704 aa12.87□□□□□ -0.35
THUMPD1-201ENST00000381337 OSBPL5Q9H0X9 879 aaPredicted RBP12.87□□□□□ -0.35
THUMPD1-201ENST00000381337 E7EVH7 732 aa12.87□□□□□ -0.35
THUMPD1-201ENST00000381337 CLGNO14967 610 aa12.87□□□□□ -0.35
THUMPD1-201ENST00000381337 CYP7A1P22680 504 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms