RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 CAMKK2Q96RR4 588 aa23.26■■□□□ 1.31
PDLIM5-205ENST00000380180 TMEM63CQ9P1W3 806 aa23.26■■□□□ 1.31
PDLIM5-205ENST00000380180 LAMB1P07942 1786 aa23.26■■□□□ 1.31
PDLIM5-205ENST00000380180 CPLX1O14810 134 aa23.26■■□□□ 1.31
PDLIM5-205ENST00000380180 ALDH1B1P30837 517 aa23.26■■□□□ 1.31
PDLIM5-205ENST00000380180 FOSBP53539 338 aa23.26■■□□□ 1.31
PDLIM5-205ENST00000380180 KRT85P78386 507 aa23.26■■□□□ 1.31
PDLIM5-205ENST00000380180 ZKSCAN3Q9BRR0 538 aa23.26■■□□□ 1.31
PDLIM5-205ENST00000380180 ANO8Q9HCE9 1232 aaPredicted RBP23.26■■□□□ 1.31
PDLIM5-205ENST00000380180 DCP1AQ9NPI6 582 aaPredicted RBP23.26■■□□□ 1.31
PDLIM5-205ENST00000380180 USP17L12C9JPN9 530 aa23.25■■□□□ 1.31
PDLIM5-205ENST00000380180 USP17L21D6R901 530 aa23.25■■□□□ 1.31
PDLIM5-205ENST00000380180 METAP2P50579 478 aaKnown RBP eCLIP23.25■■□□□ 1.31
PDLIM5-205ENST00000380180 RESTQ13127 1097 aa23.25■■□□□ 1.31
PDLIM5-205ENST00000380180 RXRAP19793 462 aa23.25■■□□□ 1.31
PDLIM5-205ENST00000380180 SLC15A2Q16348 729 aa23.25■■□□□ 1.31
PDLIM5-205ENST00000380180 CSPP1Q1MSJ5 1256 aa23.25■■□□□ 1.31
PDLIM5-205ENST00000380180 ZSCAN16Q9H4T2 348 aaPredicted RBP23.25■■□□□ 1.31
PDLIM5-205ENST00000380180 ATP8A2Q9NTI2 1148 aa23.25■■□□□ 1.31
PDLIM5-205ENST00000380180 ADD1P35611 737 aaKnown RBP23.24■■□□□ 1.31
PDLIM5-205ENST00000380180 ISY1Q9ULR0 285 aaKnown RBP23.24■■□□□ 1.31
PDLIM5-205ENST00000380180 CDK5RAP2Q96SN8 1893 aa23.24■■□□□ 1.31
PDLIM5-205ENST00000380180 ZBTB43O43298 467 aa23.23■■□□□ 1.31
PDLIM5-205ENST00000380180 UBE2HP62256 183 aa23.23■■□□□ 1.31
PDLIM5-205ENST00000380180 GSTO1P78417 241 aa23.23■■□□□ 1.31
PDLIM5-205ENST00000380180 SART3Q15020 963 aaKnown RBP23.23■■□□□ 1.31
PDLIM5-205ENST00000380180 DIXDC1Q155Q3 683 aa23.23■■□□□ 1.31
PDLIM5-205ENST00000380180 OLFM4Q6UX06 510 aa23.23■■□□□ 1.31
PDLIM5-205ENST00000380180 MICU3Q86XE3 530 aa23.23■■□□□ 1.31
PDLIM5-205ENST00000380180 MASTLQ96GX5 879 aa23.23■■□□□ 1.31
PDLIM5-205ENST00000380180 MTA3Q9BTC8 594 aa23.23■■□□□ 1.31
PDLIM5-205ENST00000380180 DUOX1Q9NRD9 1551 aa23.23■■□□□ 1.31
PDLIM5-205ENST00000380180 CCDC69A6NI79 296 aa23.23■■□□□ 1.31
PDLIM5-205ENST00000380180 ZNF445P59923 1031 aa23.23■■□□□ 1.31
PDLIM5-205ENST00000380180 ESR2Q92731 530 aa23.23■■□□□ 1.31
PDLIM5-205ENST00000380180 ORC3Q9UBD5 711 aaPredicted RBP23.23■■□□□ 1.31
PDLIM5-205ENST00000380180 SLC12A7Q9Y666 1083 aa23.23■■□□□ 1.31
PDLIM5-205ENST00000380180 CDC27P30260 824 aa23.22■■□□□ 1.31
PDLIM5-205ENST00000380180 MYL10Q9BUA6 226 aa23.22■■□□□ 1.31
PDLIM5-205ENST00000380180 TFIP11Q9UBB9 837 aaKnown RBP23.22■■□□□ 1.31
PDLIM5-205ENST00000380180 ERICH2A1L162 156 aa23.21■■□□□ 1.31
PDLIM5-205ENST00000380180 FGRP09769 529 aa23.21■■□□□ 1.31
PDLIM5-205ENST00000380180 WTAPQ15007 396 aa23.21■■□□□ 1.31
PDLIM5-205ENST00000380180 TPRNQ4KMQ1 711 aa23.21■■□□□ 1.31
PDLIM5-205ENST00000380180 CCDC144CPQ8IYA2 1237 aa23.21■■□□□ 1.31
PDLIM5-205ENST00000380180 MPNDQ8N594 471 aa23.21■■□□□ 1.31
PDLIM5-205ENST00000380180 QSER1Q2KHR3 1735 aa23.21■■□□□ 1.31
PDLIM5-205ENST00000380180 RIMBP2O15034 1052 aa23.21■■□□□ 1.31
PDLIM5-205ENST00000380180 LDHCP07864 332 aa23.21■■□□□ 1.31
PDLIM5-205ENST00000380180 XRCC6P12956 609 aaKnown RBP eCLIP23.21■■□□□ 1.31
PDLIM5-205ENST00000380180 GUCY1B3Q02153 619 aa23.21■■□□□ 1.31
PDLIM5-205ENST00000380180 TTC6Q86TZ1 520 aa23.21■■□□□ 1.31
PDLIM5-205ENST00000380180 ECM29Q5VYK3 1845 aa23.2■■□□□ 1.31
PDLIM5-205ENST00000380180 EVX2Q03828 476 aa23.2■■□□□ 1.3
PDLIM5-205ENST00000380180 TMTC2Q8N394 836 aa23.2■■□□□ 1.3
PDLIM5-205ENST00000380180 ZNF622Q969S3 477 aaKnown RBP eCLIP23.2■■□□□ 1.3
PDLIM5-205ENST00000380180 UBAC1Q9BSL1 405 aa23.2■■□□□ 1.3
PDLIM5-205ENST00000380180 FAM217BQ9NTX9 383 aaPredicted RBP23.2■■□□□ 1.3
PDLIM5-205ENST00000380180 STK32BQ9NY57 414 aa23.2■■□□□ 1.3
PDLIM5-205ENST00000380180 GOLGA8AA7E2F4 631 aa23.2■■□□□ 1.3
PDLIM5-205ENST00000380180 BAG3O95817 575 aa23.2■■□□□ 1.3
PDLIM5-205ENST00000380180 PCP11498 1178 aaKnown RBP23.2■■□□□ 1.3
PDLIM5-205ENST00000380180 MRE11P49959 708 aa23.2■■□□□ 1.3
PDLIM5-205ENST00000380180 PPP4CP60510 307 aa23.2■■□□□ 1.3
PDLIM5-205ENST00000380180 SBK1Q52WX2 424 aa23.2■■□□□ 1.3
PDLIM5-205ENST00000380180 MFSD14BQ5SR56 506 aa23.2■■□□□ 1.3
PDLIM5-205ENST00000380180 SYNE3Q6ZMZ3 975 aa23.2■■□□□ 1.3
PDLIM5-205ENST00000380180 SH3RF3Q8TEJ3 882 aaPredicted RBP23.2■■□□□ 1.3
PDLIM5-205ENST00000380180 SCAND2PQ9GZW5 306 aaPredicted RBP23.2■■□□□ 1.3
PDLIM5-205ENST00000380180 GRPEL1Q9HAV7 217 aa23.2■■□□□ 1.3
PDLIM5-205ENST00000380180 ARPP21Q9UBL0 812 aaPredicted RBP23.2■■□□□ 1.3
PDLIM5-205ENST00000380180 PRDM1O75626 825 aa23.19■■□□□ 1.3
PDLIM5-205ENST00000380180 C8orf76Q96K31 380 aa23.19■■□□□ 1.3
PDLIM5-205ENST00000380180 ZC3H12CQ9C0D7 883 aaKnown RBP23.19■■□□□ 1.3
PDLIM5-205ENST00000380180 MROH7-TTC4A0A0A0MT08 1334 aa23.19■■□□□ 1.3
PDLIM5-205ENST00000380180 DLEC1Q9Y238 1755 aa23.18■■□□□ 1.3
PDLIM5-205ENST00000380180 RANBP6O60518 1105 aaKnown RBP23.18■■□□□ 1.3
PDLIM5-205ENST00000380180 CDKL5O76039 1030 aa23.18■■□□□ 1.3
PDLIM5-205ENST00000380180 CYP2D6P10635 497 aa23.18■■□□□ 1.3
PDLIM5-205ENST00000380180 NTRK3Q16288 839 aa23.18■■□□□ 1.3
PDLIM5-205ENST00000380180 CPLX2Q6PUV4 134 aaKnown RBP23.18■■□□□ 1.3
PDLIM5-205ENST00000380180 DPP8Q6V1X1 898 aaPredicted RBP23.18■■□□□ 1.3
PDLIM5-205ENST00000380180 TBC1D22AQ8WUA7 517 aa23.18■■□□□ 1.3
PDLIM5-205ENST00000380180 NOL10Q9BSC4 688 aaKnown RBP23.18■■□□□ 1.3
PDLIM5-205ENST00000380180 COA1Q9GZY4 146 aa23.18■■□□□ 1.3
PDLIM5-205ENST00000380180 MKRN1Q9UHC7 482 aaKnown RBP23.18■■□□□ 1.3
PDLIM5-205ENST00000380180 ELP1O95163 1332 aa23.18■■□□□ 1.3
PDLIM5-205ENST00000380180 SLX4Q8IY92 1834 aa23.18■■□□□ 1.3
PDLIM5-205ENST00000380180 USP5P45974 858 aa23.18■■□□□ 1.3
PDLIM5-205ENST00000380180 SEC23AQ15436 765 aa23.18■■□□□ 1.3
PDLIM5-205ENST00000380180 C2CD5Q86YS7 1000 aa23.18■■□□□ 1.3
PDLIM5-205ENST00000380180 SYAP1Q96A49 352 aaPredicted RBP23.18■■□□□ 1.3
PDLIM5-205ENST00000380180 RTFDC1Q9BY42 306 aaPredicted RBP23.18■■□□□ 1.3
PDLIM5-205ENST00000380180 MCM9Q9NXL9 1143 aa23.18■■□□□ 1.3
PDLIM5-205ENST00000380180 NAV1Q8NEY1 1877 aa23.18■■□□□ 1.3
PDLIM5-205ENST00000380180 TNKSO95271 1327 aa23.17■■□□□ 1.3
PDLIM5-205ENST00000380180 FAM205AQ6ZU69 1335 aa23.17■■□□□ 1.3
PDLIM5-205ENST00000380180 SYCE3A1L190 88 aa23.17■■□□□ 1.3
PDLIM5-205ENST00000380180 USP17L8P0C7I0 530 aa23.17■■□□□ 1.3
PDLIM5-205ENST00000380180 GTF2IP78347 998 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms