RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 CIAO1O76071 339 aa16.03■□□□□ 0.16
SNCAIP-203ENST00000379538 ATP1A3P13637 1013 aa16.03■□□□□ 0.16
SNCAIP-203ENST00000379538 PHKA1P46020 1223 aa16.03■□□□□ 0.16
SNCAIP-203ENST00000379538 DDR1Q08345 913 aa16.03■□□□□ 0.16
SNCAIP-203ENST00000379538 SLC27A3Q5K4L6 730 aa16.03■□□□□ 0.16
SNCAIP-203ENST00000379538 TPTE2Q6XPS3 522 aa16.03■□□□□ 0.16
SNCAIP-203ENST00000379538 CCDC73Q6ZRK6 1079 aa16.03■□□□□ 0.16
SNCAIP-203ENST00000379538 ENGASEQ8NFI3 743 aa16.03■□□□□ 0.16
SNCAIP-203ENST00000379538 FEZ2Q9UHY8 353 aaPredicted RBP16.03■□□□□ 0.16
SNCAIP-203ENST00000379538 LCMT1Q9UIC8 334 aa16.03■□□□□ 0.16
SNCAIP-203ENST00000379538 PDE8BO95263 885 aa16.02■□□□□ 0.16
SNCAIP-203ENST00000379538 KLRK1P26718 216 aa16.02■□□□□ 0.16
SNCAIP-203ENST00000379538 LMOD1P29536 600 aaPredicted RBP16.02■□□□□ 0.16
SNCAIP-203ENST00000379538 ANKRD1Q15327 319 aa16.02■□□□□ 0.16
SNCAIP-203ENST00000379538 CARD6Q9BX69 1037 aa16.02■□□□□ 0.16
SNCAIP-203ENST00000379538 CFAP45Q9UL16 551 aa16.02■□□□□ 0.16
SNCAIP-203ENST00000379538 CARMIL3Q8ND23 1372 aa16.02■□□□□ 0.15
SNCAIP-203ENST00000379538 TRIM66O15016 1216 aa16.02■□□□□ 0.15
SNCAIP-203ENST00000379538 URI1O94763 535 aaPredicted RBP16.02■□□□□ 0.15
SNCAIP-203ENST00000379538 CTDNEP1O95476 244 aa16.02■□□□□ 0.15
SNCAIP-203ENST00000379538 IFIT1P09914 478 aaKnown RBP16.02■□□□□ 0.15
SNCAIP-203ENST00000379538 ATP5JP18859 108 aa16.02■□□□□ 0.15
SNCAIP-203ENST00000379538 CHRNDQ07001 517 aa16.02■□□□□ 0.15
SNCAIP-203ENST00000379538 RNF20Q5VTR2 975 aa16.02■□□□□ 0.15
SNCAIP-203ENST00000379538 CEP57L1Q8IYX8 460 aa16.02■□□□□ 0.15
SNCAIP-203ENST00000379538 GJB4Q9NTQ9 266 aa16.02■□□□□ 0.15
SNCAIP-203ENST00000379538 ANO10Q9NW15 660 aa16.02■□□□□ 0.15
SNCAIP-203ENST00000379538 APOBRQ0VD83 1088 aa16.01■□□□□ 0.15
SNCAIP-203ENST00000379538 PRR5LQ6MZQ0 368 aa16.01■□□□□ 0.15
SNCAIP-203ENST00000379538 ILDR1Q86SU0 546 aaPredicted RBP16.01■□□□□ 0.15
SNCAIP-203ENST00000379538 UBXN4Q92575 508 aa16.01■□□□□ 0.15
SNCAIP-203ENST00000379538 GPR101Q96P66 508 aaPredicted RBP16.01■□□□□ 0.15
SNCAIP-203ENST00000379538 NEK1Q96PY6 1258 aa16.01■□□□□ 0.15
SNCAIP-203ENST00000379538 ORC3Q9UBD5 711 aaPredicted RBP16.01■□□□□ 0.15
SNCAIP-203ENST00000379538 ZNF609O15014 1411 aa16.01■□□□□ 0.15
SNCAIP-203ENST00000379538 ZRANB2O95218 330 aaKnown RBP eCLIP16.01■□□□□ 0.15
SNCAIP-203ENST00000379538 SFPQP23246 707 aaKnown RBP eCLIP16.01■□□□□ 0.15
SNCAIP-203ENST00000379538 ZAP70P43403 619 aa16.01■□□□□ 0.15
SNCAIP-203ENST00000379538 BCAMP50895 628 aa16.01■□□□□ 0.15
SNCAIP-203ENST00000379538 NDUFA8P51970 172 aa16.01■□□□□ 0.15
SNCAIP-203ENST00000379538 HSP90AA4PQ58FG1 418 aa16.01■□□□□ 0.15
SNCAIP-203ENST00000379538 CNBD1Q8NA66 436 aa16.01■□□□□ 0.15
SNCAIP-203ENST00000379538 NLRP3Q96P20 1036 aa16.01■□□□□ 0.15
SNCAIP-203ENST00000379538 RCOR1Q9UKL0 485 aa16.01■□□□□ 0.15
SNCAIP-203ENST00000379538 JAG2Q9Y219 1238 aa16.01■□□□□ 0.15
SNCAIP-203ENST00000379538 MYH3P11055 1940 aa16■□□□□ 0.15
SNCAIP-203ENST00000379538 SERPINB2P05120 415 aa16■□□□□ 0.15
SNCAIP-203ENST00000379538 CYP21A2P08686 494 aa16■□□□□ 0.15
SNCAIP-203ENST00000379538 IGHMBP2P38935 993 aaKnown RBP16■□□□□ 0.15
SNCAIP-203ENST00000379538 TMCO3Q6UWJ1 677 aa16■□□□□ 0.15
SNCAIP-203ENST00000379538 KRBA2Q6ZNG9 492 aa16■□□□□ 0.15
SNCAIP-203ENST00000379538 STOX1Q6ZVD7 989 aa16■□□□□ 0.15
SNCAIP-203ENST00000379538 DDX60Q8IY21 1712 aaKnown RBP16■□□□□ 0.15
SNCAIP-203ENST00000379538 MCAMP43121 646 aa16■□□□□ 0.15
SNCAIP-203ENST00000379538 FAM160A1Q05DH4 1040 aa16■□□□□ 0.15
SNCAIP-203ENST00000379538 TTC39AQ5SRH9 613 aa16■□□□□ 0.15
SNCAIP-203ENST00000379538 PCDHA7Q9UN72 937 aa16■□□□□ 0.15
SNCAIP-203ENST00000379538 C4AP0C0L4 1744 aa16■□□□□ 0.15
SNCAIP-203ENST00000379538 PLSCR1O15162 318 aa15.99■□□□□ 0.15
SNCAIP-203ENST00000379538 POLR3DP05423 398 aaPredicted RBP15.99■□□□□ 0.15
SNCAIP-203ENST00000379538 DPF2Q92785 391 aa15.99■□□□□ 0.15
SNCAIP-203ENST00000379538 OSBPL5Q9H0X9 879 aaPredicted RBP15.99■□□□□ 0.15
SNCAIP-203ENST00000379538 PTPDC1A2A3K4 754 aa15.99■□□□□ 0.15
SNCAIP-203ENST00000379538 CAVIN2O95810 425 aa15.99■□□□□ 0.15
SNCAIP-203ENST00000379538 TM4SF1P30408 202 aa15.99■□□□□ 0.15
SNCAIP-203ENST00000379538 GYG1P46976 350 aa15.99■□□□□ 0.15
SNCAIP-203ENST00000379538 OLFM4Q6UX06 510 aa15.99■□□□□ 0.15
SNCAIP-203ENST00000379538 RAB11FIP4Q86YS3 637 aa15.99■□□□□ 0.15
SNCAIP-203ENST00000379538 NSUN7Q8NE18 718 aaKnown RBP15.99■□□□□ 0.15
SNCAIP-203ENST00000379538 HAUS7Q99871 368 aa15.99■□□□□ 0.15
SNCAIP-203ENST00000379538 PAG1Q9NWQ8 432 aa15.99■□□□□ 0.15
SNCAIP-203ENST00000379538 BCORQ6W2J9 1755 aa15.99■□□□□ 0.15
SNCAIP-203ENST00000379538 CCDC102BQ68D86 513 aa15.98■□□□□ 0.15
SNCAIP-203ENST00000379538 ANKRD18AQ8IVF6 992 aa15.98■□□□□ 0.15
SNCAIP-203ENST00000379538 AKT1S1Q96B36 256 aa15.98■□□□□ 0.15
SNCAIP-203ENST00000379538 WWC3Q9ULE0 1092 aa15.98■□□□□ 0.15
SNCAIP-203ENST00000379538 OAS2P29728 719 aaKnown RBP15.98■□□□□ 0.15
SNCAIP-203ENST00000379538 TRIM65Q6PJ69 517 aa15.98■□□□□ 0.15
SNCAIP-203ENST00000379538 GPHNQ9NQX3 736 aaPredicted RBP15.98■□□□□ 0.15
SNCAIP-203ENST00000379538 SPEF2Q9C093 1822 aa15.98■□□□□ 0.15
SNCAIP-203ENST00000379538 GSDMDP57764 484 aa15.97■□□□□ 0.15
SNCAIP-203ENST00000379538 ETF1P62495 437 aaKnown RBP15.97■□□□□ 0.15
SNCAIP-203ENST00000379538 CCDC158Q5M9N0 1113 aa15.97■□□□□ 0.15
SNCAIP-203ENST00000379538 C10orf67Q8IYJ2 551 aa15.97■□□□□ 0.15
SNCAIP-203ENST00000379538 FMR1NBQ8N0W7 255 aaPredicted RBP15.97■□□□□ 0.15
SNCAIP-203ENST00000379538 MNS1Q8NEH6 495 aa15.97■□□□□ 0.15
SNCAIP-203ENST00000379538 ZSCAN16Q9H4T2 348 aaPredicted RBP15.97■□□□□ 0.15
SNCAIP-203ENST00000379538 ZSWIM4Q9H7M6 989 aa15.97■□□□□ 0.15
SNCAIP-203ENST00000379538 MINPP1Q9UNW1 487 aa15.97■□□□□ 0.15
SNCAIP-203ENST00000379538 MED23Q9ULK4 1368 aa15.97■□□□□ 0.15
SNCAIP-203ENST00000379538 UBR3Q6ZT12 1888 aa15.97■□□□□ 0.15
SNCAIP-203ENST00000379538 TBC1D8O95759 1140 aa15.97■□□□□ 0.15
SNCAIP-203ENST00000379538 GNL2Q13823 731 aaKnown RBP15.97■□□□□ 0.15
SNCAIP-203ENST00000379538 SF3B3Q15393 1217 aaKnown RBP15.97■□□□□ 0.15
SNCAIP-203ENST00000379538 TXNRD3Q86VQ6 643 aa15.97■□□□□ 0.15
SNCAIP-203ENST00000379538 AKAP2Q9Y2D5 859 aa15.97■□□□□ 0.15
SNCAIP-203ENST00000379538 CLIC4Q9Y696 253 aa15.97■□□□□ 0.15
SNCAIP-203ENST00000379538 CTAGE5O15320 804 aa15.96■□□□□ 0.15
SNCAIP-203ENST00000379538 RPS8P62241 208 aaKnown RBP15.96■□□□□ 0.15
SNCAIP-203ENST00000379538 NYXQ9GZU5 481 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms