RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 LRRFIP2Q9Y608 721 aaKnown RBP22.15■■□□□ 1.14
PDLIM4-202ENST00000379018 ZNF521Q96K83 1311 aa22.14■■□□□ 1.14
PDLIM4-202ENST00000379018 ADCY3O60266 1144 aa22.14■■□□□ 1.13
PDLIM4-202ENST00000379018 UBTFL1P0CB47 393 aaPredicted RBP22.14■■□□□ 1.13
PDLIM4-202ENST00000379018 ADORA1P30542 326 aa22.14■■□□□ 1.13
PDLIM4-202ENST00000379018 FASTKD5Q7L8L6 764 aaKnown RBP22.14■■□□□ 1.13
PDLIM4-202ENST00000379018 CCDC84Q86UT8 332 aaPredicted RBP22.14■■□□□ 1.13
PDLIM4-202ENST00000379018 DZIP1Q86YF9 867 aaKnown RBP22.14■■□□□ 1.13
PDLIM4-202ENST00000379018 SMCR8Q8TEV9 937 aaPredicted RBP22.14■■□□□ 1.13
PDLIM4-202ENST00000379018 PA2G4Q9UQ80 394 aaKnown RBP22.14■■□□□ 1.13
PDLIM4-202ENST00000379018 A0A0G2JLL6 359 aaPredicted RBP22.13■■□□□ 1.13
PDLIM4-202ENST00000379018 TRIM75PA6NK02 468 aa22.13■■□□□ 1.13
PDLIM4-202ENST00000379018 PHF20L1A8MW92 1017 aa22.13■■□□□ 1.13
PDLIM4-202ENST00000379018 PTPRAP18433 802 aa22.13■■□□□ 1.13
PDLIM4-202ENST00000379018 FLT3LGP49771 235 aa22.13■■□□□ 1.13
PDLIM4-202ENST00000379018 PRRT2Q7Z6L0 340 aaPredicted RBP22.13■■□□□ 1.13
PDLIM4-202ENST00000379018 SMC4Q9NTJ3 1288 aa22.13■■□□□ 1.13
PDLIM4-202ENST00000379018 ABCF2Q9UG63 623 aa22.13■■□□□ 1.13
PDLIM4-202ENST00000379018 NR2E3Q9Y5X4 410 aa22.13■■□□□ 1.13
PDLIM4-202ENST00000379018 ATRNL1Q5VV63 1379 aa22.12■■□□□ 1.13
PDLIM4-202ENST00000379018 DOCK1Q14185 1865 aa22.12■■□□□ 1.13
PDLIM4-202ENST00000379018 TNPO2O14787 897 aaKnown RBP22.12■■□□□ 1.13
PDLIM4-202ENST00000379018 INHAP05111 366 aa22.12■■□□□ 1.13
PDLIM4-202ENST00000379018 PTPRFP10586 1907 aa22.12■■□□□ 1.13
PDLIM4-202ENST00000379018 SALL1Q9NSC2 1324 aa22.11■■□□□ 1.13
PDLIM4-202ENST00000379018 DDTLA6NHG4 134 aaPredicted RBP22.11■■□□□ 1.13
PDLIM4-202ENST00000379018 SH3BP5LQ7L8J4 393 aa22.11■■□□□ 1.13
PDLIM4-202ENST00000379018 UBE2Q1Q7Z7E8 422 aa22.11■■□□□ 1.13
PDLIM4-202ENST00000379018 AFG3L2Q9Y4W6 797 aa22.11■■□□□ 1.13
PDLIM4-202ENST00000379018 SZT2Q5T011 3432 aa22.11■■□□□ 1.13
PDLIM4-202ENST00000379018 E9PSI1 815 aa22.1■■□□□ 1.13
PDLIM4-202ENST00000379018 ENTPD3O75355 529 aa22.1■■□□□ 1.13
PDLIM4-202ENST00000379018 CIAO1O76071 339 aa22.1■■□□□ 1.13
PDLIM4-202ENST00000379018 TFRCP02786 760 aaKnown RBP22.1■■□□□ 1.13
PDLIM4-202ENST00000379018 BTDP43251 543 aa22.1■■□□□ 1.13
PDLIM4-202ENST00000379018 CCDC102BQ68D86 513 aa22.1■■□□□ 1.13
PDLIM4-202ENST00000379018 ZGPATQ8N5A5 531 aaKnown RBP22.1■■□□□ 1.13
PDLIM4-202ENST00000379018 DEFB118Q96PH6 123 aa22.1■■□□□ 1.13
PDLIM4-202ENST00000379018 DDX4Q9NQI0 724 aaKnown RBP22.1■■□□□ 1.13
PDLIM4-202ENST00000379018 FAM196BA6NMK8 535 aa22.09■■□□□ 1.13
PDLIM4-202ENST00000379018 SEMA3EO15041 775 aa22.09■■□□□ 1.13
PDLIM4-202ENST00000379018 ZBTB7BO15156 539 aaPredicted RBP22.09■■□□□ 1.13
PDLIM4-202ENST00000379018 SGPL1O95470 568 aa22.09■■□□□ 1.13
PDLIM4-202ENST00000379018 ANKRD13CQ8N6S4 541 aa22.09■■□□□ 1.13
PDLIM4-202ENST00000379018 IDI2Q9BXS1 227 aa22.09■■□□□ 1.13
PDLIM4-202ENST00000379018 DOCK3Q8IZD9 2030 aa22.09■■□□□ 1.13
PDLIM4-202ENST00000379018 GAKO14976 1311 aa22.08■■□□□ 1.13
PDLIM4-202ENST00000379018 EVI5O60447 810 aa22.08■■□□□ 1.13
PDLIM4-202ENST00000379018 IL15P40933 162 aaPredicted RBP22.08■■□□□ 1.13
PDLIM4-202ENST00000379018 RASGRF1Q13972 1273 aa22.08■■□□□ 1.13
PDLIM4-202ENST00000379018 PHIPQ8WWQ0 1821 aa22.08■■□□□ 1.12
PDLIM4-202ENST00000379018 RANBP2P49792 3224 aaKnown RBP22.07■■□□□ 1.12
PDLIM4-202ENST00000379018 TREML2Q5T2D2 321 aa22.07■■□□□ 1.12
PDLIM4-202ENST00000379018 FBXO3Q9UK99 471 aa22.07■■□□□ 1.12
PDLIM4-202ENST00000379018 RFX7Q2KHR2 1363 aa22.07■■□□□ 1.12
PDLIM4-202ENST00000379018 CTNND1O60716 968 aaKnown RBP22.06■■□□□ 1.12
PDLIM4-202ENST00000379018 TIMM10P62072 90 aa22.06■■□□□ 1.12
PDLIM4-202ENST00000379018 SLF2Q8IX21 1173 aa22.06■■□□□ 1.12
PDLIM4-202ENST00000379018 COA7Q96BR5 231 aa22.06■■□□□ 1.12
PDLIM4-202ENST00000379018 ALDH1L2Q3SY69 923 aa22.05■■□□□ 1.12
PDLIM4-202ENST00000379018 AGTPBP1Q9UPW5 1226 aa22.05■■□□□ 1.12
PDLIM4-202ENST00000379018 SLC45A1Q9Y2W3 748 aa22.05■■□□□ 1.12
PDLIM4-202ENST00000379018 MROH7-TTC4A0A0A0MT08 1334 aa22.05■■□□□ 1.12
PDLIM4-202ENST00000379018 ZNF316A6NFI3 1004 aaPredicted RBP22.04■■□□□ 1.12
PDLIM4-202ENST00000379018 SLFN5Q08AF3 891 aa22.04■■□□□ 1.12
PDLIM4-202ENST00000379018 SPTY2D1Q68D10 685 aaPredicted RBP22.04■■□□□ 1.12
PDLIM4-202ENST00000379018 CDCA7LQ96GN5 454 aa22.04■■□□□ 1.12
PDLIM4-202ENST00000379018 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.04■■□□□ 1.12
PDLIM4-202ENST00000379018 NOB1Q9ULX3 412 aaKnown RBP22.04■■□□□ 1.12
PDLIM4-202ENST00000379018 MECOMQ03112 1051 aa22.03■■□□□ 1.12
PDLIM4-202ENST00000379018 ERICH6Q7L0X2 663 aa22.03■■□□□ 1.12
PDLIM4-202ENST00000379018 PXYLP1Q8TE99 480 aa22.03■■□□□ 1.12
PDLIM4-202ENST00000379018 DIS3LQ8TF46 1054 aaKnown RBP22.03■■□□□ 1.12
PDLIM4-202ENST00000379018 PAWRQ96IZ0 340 aaKnown RBP22.03■■□□□ 1.12
PDLIM4-202ENST00000379018 MEIS3Q99687 375 aa22.03■■□□□ 1.12
PDLIM4-202ENST00000379018 PRO3102Q9H379 93 aa22.03■■□□□ 1.12
PDLIM4-202ENST00000379018 A0A1B0GUL7 405 aa22.02■■□□□ 1.12
PDLIM4-202ENST00000379018 IRF5Q13568 498 aa22.02■■□□□ 1.12
PDLIM4-202ENST00000379018 XAGE2Q96GT9 111 aa22.02■■□□□ 1.12
PDLIM4-202ENST00000379018 NEUROD6Q96NK8 337 aa22.02■■□□□ 1.12
PDLIM4-202ENST00000379018 STAP2Q9UGK3 403 aa22.02■■□□□ 1.12
PDLIM4-202ENST00000379018 PNMA3Q9UL41 463 aa22.02■■□□□ 1.12
PDLIM4-202ENST00000379018 ALPK3Q96L96 1907 aa22.02■■□□□ 1.11
PDLIM4-202ENST00000379018 ATAD5Q96QE3 1844 aa22.01■■□□□ 1.11
PDLIM4-202ENST00000379018 SOX1O00570 391 aaPredicted RBP22.01■■□□□ 1.11
PDLIM4-202ENST00000379018 HMGCS2P54868 508 aa22.01■■□□□ 1.11
PDLIM4-202ENST00000379018 TFCP2Q12800 502 aa22.01■■□□□ 1.11
PDLIM4-202ENST00000379018 SPP2Q13103 211 aa22.01■■□□□ 1.11
PDLIM4-202ENST00000379018 PI16Q6UXB8 463 aa22.01■■□□□ 1.11
PDLIM4-202ENST00000379018 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.01■■□□□ 1.11
PDLIM4-202ENST00000379018 COPRSQ9NQ92 184 aa22.01■■□□□ 1.11
PDLIM4-202ENST00000379018 PAK6Q9NQU5 681 aaPredicted RBP22.01■■□□□ 1.11
PDLIM4-202ENST00000379018 MAP3K10Q02779 954 aa22■■□□□ 1.11
PDLIM4-202ENST00000379018 FAM110CQ1W6H9 321 aa22■■□□□ 1.11
PDLIM4-202ENST00000379018 C7orf61Q8IZ16 206 aa22■■□□□ 1.11
PDLIM4-202ENST00000379018 LRCH3Q96II8 777 aa22■■□□□ 1.11
PDLIM4-202ENST00000379018 RHBDL3P58872 404 aa21.99■■□□□ 1.11
PDLIM4-202ENST00000379018 MVPQ14764 893 aaKnown RBP21.99■■□□□ 1.11
PDLIM4-202ENST00000379018 GORABQ5T7V8 394 aa21.99■■□□□ 1.11
PDLIM4-202ENST00000379018 TBC1D9Q6ZT07 1266 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms