RNA–Protein interactions for RNA: ENST00000378152.8

ARHGEF1-204, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-204ENST00000378152 PTPAQ15257 358 aa18.4■□□□□ 0.54
ARHGEF1-204ENST00000378152 PPP2R2CQ9Y2T4 447 aa18.4■□□□□ 0.54
ARHGEF1-204ENST00000378152 NUP188Q5SRE5 1749 aa18.4■□□□□ 0.54
ARHGEF1-204ENST00000378152 VWA3AA6NCI4 1184 aa18.39■□□□□ 0.54
ARHGEF1-204ENST00000378152 CIAO1O76071 339 aa18.39■□□□□ 0.54
ARHGEF1-204ENST00000378152 NBPF3Q9H094 633 aa18.39■□□□□ 0.54
ARHGEF1-204ENST00000378152 INTS13Q9NVM9 706 aa18.39■□□□□ 0.54
ARHGEF1-204ENST00000378152 ZRANB2O95218 330 aaKnown RBP eCLIP18.39■□□□□ 0.532e-6■■■□□ 15.3
ARHGEF1-204ENST00000378152 ZFYP08048 801 aaPredicted RBP18.39■□□□□ 0.53
ARHGEF1-204ENST00000378152 GNG11P61952 73 aa18.39■□□□□ 0.53
ARHGEF1-204ENST00000378152 TAF7LQ5H9L4 462 aa18.39■□□□□ 0.53
ARHGEF1-204ENST00000378152 TBC1D10CQ8IV04 446 aa18.39■□□□□ 0.53
ARHGEF1-204ENST00000378152 JMYQ8N9B5 988 aa18.39■□□□□ 0.53
ARHGEF1-204ENST00000378152 WDR24Q96S15 920 aa18.39■□□□□ 0.53
ARHGEF1-204ENST00000378152 ANGEL1Q9UNK9 670 aaKnown RBP18.39■□□□□ 0.53
ARHGEF1-204ENST00000378152 ZMYM6O95789 1325 aa18.38■□□□□ 0.53
ARHGEF1-204ENST00000378152 BMP6P22004 513 aa18.38■□□□□ 0.53
ARHGEF1-204ENST00000378152 ADKP55263 362 aaKnown RBP18.38■□□□□ 0.53
ARHGEF1-204ENST00000378152 CCDC191Q8NCU4 936 aa18.38■□□□□ 0.53
ARHGEF1-204ENST00000378152 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.38■□□□□ 0.53
ARHGEF1-204ENST00000378152 MAP3K14Q99558 947 aa18.38■□□□□ 0.53
ARHGEF1-204ENST00000378152 INCENPQ9NQS7 918 aa18.38■□□□□ 0.53
ARHGEF1-204ENST00000378152 B4E1Z4 1266 aa18.38■□□□□ 0.53
ARHGEF1-204ENST00000378152 ZSCAN12O43309 604 aa18.38■□□□□ 0.53
ARHGEF1-204ENST00000378152 PPP6R2O75170 966 aa18.38■□□□□ 0.53
ARHGEF1-204ENST00000378152 RESP18Q5W5W9 173 aa18.38■□□□□ 0.53
ARHGEF1-204ENST00000378152 CCDC102BQ68D86 513 aa18.38■□□□□ 0.53
ARHGEF1-204ENST00000378152 TICAM2Q86XR7 235 aa18.38■□□□□ 0.53
ARHGEF1-204ENST00000378152 TMEM139Q8IV31 216 aa18.38■□□□□ 0.53
ARHGEF1-204ENST00000378152 KCNH3Q9ULD8 1083 aa18.38■□□□□ 0.53
ARHGEF1-204ENST00000378152 TEX35Q5T0J7 233 aa18.37■□□□□ 0.53
ARHGEF1-204ENST00000378152 NFXL1Q6ZNB6 911 aa18.37■□□□□ 0.53
ARHGEF1-204ENST00000378152 TRERF1Q96PN7 1200 aa18.37■□□□□ 0.53
ARHGEF1-204ENST00000378152 THRAP3Q9Y2W1 955 aaKnown RBP18.37■□□□□ 0.53
ARHGEF1-204ENST00000378152 CICQ96RK0 1608 aaPredicted RBP18.37■□□□□ 0.53
ARHGEF1-204ENST00000378152 CASQ1P31415 396 aa18.37■□□□□ 0.53
ARHGEF1-204ENST00000378152 ZNF827Q17R98 1081 aa18.37■□□□□ 0.53
ARHGEF1-204ENST00000378152 KRBA2Q6ZNG9 492 aa18.37■□□□□ 0.53
ARHGEF1-204ENST00000378152 TOGARAM2Q6ZUX3 1019 aa18.37■□□□□ 0.53
ARHGEF1-204ENST00000378152 TRMT44Q8IYL2 757 aaKnown RBP18.37■□□□□ 0.53
ARHGEF1-204ENST00000378152 BAG1Q99933 345 aaPredicted RBP18.37■□□□□ 0.53
ARHGEF1-204ENST00000378152 CDCA7Q9BWT1 371 aaPredicted RBP18.37■□□□□ 0.53
ARHGEF1-204ENST00000378152 EFCAB8A8MWE9 144 aa18.36■□□□□ 0.53
ARHGEF1-204ENST00000378152 CDK11BP21127 795 aaKnown RBP18.36■□□□□ 0.53
ARHGEF1-204ENST00000378152 CYP2C19P33261 490 aa18.36■□□□□ 0.53
ARHGEF1-204ENST00000378152 ZCCHC17Q9NP64 241 aaKnown RBP18.36■□□□□ 0.53
ARHGEF1-204ENST00000378152 AKAP2Q9Y2D5 859 aa18.36■□□□□ 0.53
ARHGEF1-204ENST00000378152 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.36■□□□□ 0.53
ARHGEF1-204ENST00000378152 ARHGAP6O43182 974 aa18.36■□□□□ 0.53
ARHGEF1-204ENST00000378152 TRIM29Q14134 588 aa18.36■□□□□ 0.53
ARHGEF1-204ENST00000378152 APOA5Q6Q788 366 aa18.36■□□□□ 0.53
ARHGEF1-204ENST00000378152 DESI2Q9BSY9 194 aa18.36■□□□□ 0.53
ARHGEF1-204ENST00000378152 SRRTQ9BXP5 876 aaKnown RBP18.36■□□□□ 0.53
ARHGEF1-204ENST00000378152 FAM89AQ96GI7 184 aa18.36■□□□□ 0.53
ARHGEF1-204ENST00000378152 CCDC34Q96HJ3 373 aa18.36■□□□□ 0.53
ARHGEF1-204ENST00000378152 C4AP0C0L4 1744 aa18.35■□□□□ 0.53
ARHGEF1-204ENST00000378152 C4BP0C0L5 1744 aa18.35■□□□□ 0.53
ARHGEF1-204ENST00000378152 SH2B2O14492 632 aaPredicted RBP18.35■□□□□ 0.53
ARHGEF1-204ENST00000378152 IARSP41252 1262 aaKnown RBP18.35■□□□□ 0.53
ARHGEF1-204ENST00000378152 KARSQ15046 597 aaKnown RBP18.35■□□□□ 0.53
ARHGEF1-204ENST00000378152 SLC9C2Q5TAH2 1124 aa18.35■□□□□ 0.53
ARHGEF1-204ENST00000378152 DOT1LQ8TEK3 1739 aa18.35■□□□□ 0.53
ARHGEF1-204ENST00000378152 SPATA31A1Q5TZJ5 1347 aa18.35■□□□□ 0.53
ARHGEF1-204ENST00000378152 RANBP6O60518 1105 aaKnown RBP18.35■□□□□ 0.53
ARHGEF1-204ENST00000378152 SASH3O75995 380 aa18.35■□□□□ 0.53
ARHGEF1-204ENST00000378152 CDKL5O76039 1030 aa18.35■□□□□ 0.53
ARHGEF1-204ENST00000378152 GRIN1Q05586 938 aa18.35■□□□□ 0.53
ARHGEF1-204ENST00000378152 FMR1Q06787 632 aaKnown RBP eCLIP18.35■□□□□ 0.532e-6■■■□□ 15.1
ARHGEF1-204ENST00000378152 CPLX2Q6PUV4 134 aaKnown RBP18.35■□□□□ 0.53
ARHGEF1-204ENST00000378152 GRAMD1CQ8IYS0 662 aa18.35■□□□□ 0.53
ARHGEF1-204ENST00000378152 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.35■□□□□ 0.53
ARHGEF1-204ENST00000378152 SLC26A6Q9BXS9 759 aa18.35■□□□□ 0.53
ARHGEF1-204ENST00000378152 CUTAO60888 179 aa18.34■□□□□ 0.53
ARHGEF1-204ENST00000378152 PRR29P0C7W0 189 aa18.34■□□□□ 0.53
ARHGEF1-204ENST00000378152 MCAMP43121 646 aa18.34■□□□□ 0.53
ARHGEF1-204ENST00000378152 ATG3Q9NT62 314 aa18.34■□□□□ 0.53
ARHGEF1-204ENST00000378152 NFE2L3Q9Y4A8 694 aa18.34■□□□□ 0.53
ARHGEF1-204ENST00000378152 TJP1Q07157 1748 aa18.34■□□□□ 0.53
ARHGEF1-204ENST00000378152 GOLGA8AA7E2F4 631 aa18.34■□□□□ 0.53
ARHGEF1-204ENST00000378152 ZBTB43O43298 467 aa18.34■□□□□ 0.53
ARHGEF1-204ENST00000378152 IDH1O75874 414 aaKnown RBP18.34■□□□□ 0.53
ARHGEF1-204ENST00000378152 NEK11Q8NG66 645 aa18.34■□□□□ 0.53
ARHGEF1-204ENST00000378152 ZBTB9Q96C00 473 aa18.34■□□□□ 0.53
ARHGEF1-204ENST00000378152 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.34■□□□□ 0.53
ARHGEF1-204ENST00000378152 CALCOCO1Q9P1Z2 691 aa18.34■□□□□ 0.53
ARHGEF1-204ENST00000378152 SPEF2Q9C093 1822 aa18.34■□□□□ 0.53
ARHGEF1-204ENST00000378152 PPP2R3AQ06190 1150 aa18.33■□□□□ 0.53
ARHGEF1-204ENST00000378152 ZSWIM4Q9H7M6 989 aa18.33■□□□□ 0.53
ARHGEF1-204ENST00000378152 MAN1B1Q9UKM7 699 aa18.33■□□□□ 0.53
ARHGEF1-204ENST00000378152 HNRNPH2P55795 449 aaKnown RBP18.33■□□□□ 0.52
ARHGEF1-204ENST00000378152 SYNE4Q8N205 404 aa18.33■□□□□ 0.52
ARHGEF1-204ENST00000378152 CCDC82Q8N4S0 544 aa18.33■□□□□ 0.52
ARHGEF1-204ENST00000378152 TC2NQ8N9U0 490 aa18.33■□□□□ 0.52
ARHGEF1-204ENST00000378152 UBN2Q6ZU65 1347 aa18.33■□□□□ 0.52
ARHGEF1-204ENST00000378152 ATP2B1P20020 1258 aa18.33■□□□□ 0.52
ARHGEF1-204ENST00000378152 FCHSD1Q86WN1 690 aa18.33■□□□□ 0.52
ARHGEF1-204ENST00000378152 MPHOSPH8Q99549 860 aa18.33■□□□□ 0.52
ARHGEF1-204ENST00000378152 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.33■□□□□ 0.525e-7■■■■□ 19.7
ARHGEF1-204ENST00000378152 BCL9O00512 1426 aa18.32■□□□□ 0.52
ARHGEF1-204ENST00000378152 BTBD18B2RXH4 712 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms