RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 HSPA1LP34931 641 aa12.41□□□□□ -0.42
PCDHGA1-201ENST00000378105 CNBD1Q8NA66 436 aa12.41□□□□□ -0.42
PCDHGA1-201ENST00000378105 KIF9Q9HAQ2 790 aa12.41□□□□□ -0.42
PCDHGA1-201ENST00000378105 RIMBP2O15034 1052 aa12.41□□□□□ -0.42
PCDHGA1-201ENST00000378105 IL15P40933 162 aaPredicted RBP12.41□□□□□ -0.42
PCDHGA1-201ENST00000378105 TBC1D8BQ0IIM8 1120 aa12.41□□□□□ -0.42
PCDHGA1-201ENST00000378105 C11orf91Q3C1V1 193 aa12.41□□□□□ -0.42
PCDHGA1-201ENST00000378105 BICD2Q8TD16 824 aa12.41□□□□□ -0.42
PCDHGA1-201ENST00000378105 TCEANC2Q96MN5 208 aa12.41□□□□□ -0.42
PCDHGA1-201ENST00000378105 ZNF396Q96N95 335 aaPredicted RBP12.41□□□□□ -0.42
PCDHGA1-201ENST00000378105 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.41□□□□□ -0.42
PCDHGA1-201ENST00000378105 MKI67P46013 3256 aaKnown RBP12.41□□□□□ -0.42
PCDHGA1-201ENST00000378105 AFF2P51816 1311 aa12.41□□□□□ -0.42
PCDHGA1-201ENST00000378105 ITGA6P23229 1130 aa12.4□□□□□ -0.42
PCDHGA1-201ENST00000378105 BMP2KLQ5H9B9 411 aa12.4□□□□□ -0.42
PCDHGA1-201ENST00000378105 SYAP1Q96A49 352 aaPredicted RBP12.4□□□□□ -0.42
PCDHGA1-201ENST00000378105 USP44Q9H0E7 712 aa12.4□□□□□ -0.42
PCDHGA1-201ENST00000378105 PARP3Q9Y6F1 533 aa12.4□□□□□ -0.42
PCDHGA1-201ENST00000378105 KIF3CO14782 793 aa12.4□□□□□ -0.42
PCDHGA1-201ENST00000378105 TAF5LO75529 589 aa12.4□□□□□ -0.42
PCDHGA1-201ENST00000378105 RANBP1P43487 201 aa12.4□□□□□ -0.42
PCDHGA1-201ENST00000378105 DDX11Q96FC9 970 aa12.4□□□□□ -0.42
PCDHGA1-201ENST00000378105 FAM210AQ96ND0 272 aa12.4□□□□□ -0.42
PCDHGA1-201ENST00000378105 PAPPA2Q9BXP8 1791 aa12.4□□□□□ -0.42
PCDHGA1-201ENST00000378105 FOXD4Q12950 439 aaPredicted RBP12.4□□□□□ -0.42
PCDHGA1-201ENST00000378105 TMEM63CQ9P1W3 806 aa12.4□□□□□ -0.42
PCDHGA1-201ENST00000378105 SOS1Q07889 1333 aaPredicted RBP12.4□□□□□ -0.43
PCDHGA1-201ENST00000378105 DCAF8L1A6NGE4 600 aa12.39□□□□□ -0.43
PCDHGA1-201ENST00000378105 ZNF445P59923 1031 aa12.39□□□□□ -0.43
PCDHGA1-201ENST00000378105 FBXW10Q5XX13 1052 aa12.39□□□□□ -0.43
PCDHGA1-201ENST00000378105 EVI5LQ96CN4 794 aa12.39□□□□□ -0.43
PCDHGA1-201ENST00000378105 TAF1P21675 1872 aa12.39□□□□□ -0.43
PCDHGA1-201ENST00000378105 RBM47A0AV96 593 aaKnown RBP12.39□□□□□ -0.43
PCDHGA1-201ENST00000378105 CCP110O43303 1012 aa12.39□□□□□ -0.43
PCDHGA1-201ENST00000378105 POLR3DP05423 398 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA1-201ENST00000378105 RAB3GAP1Q15042 981 aa12.39□□□□□ -0.43
PCDHGA1-201ENST00000378105 IMMTQ16891 758 aaKnown RBP12.39□□□□□ -0.43
PCDHGA1-201ENST00000378105 SWT1Q5T5J6 900 aaKnown RBP12.39□□□□□ -0.43
PCDHGA1-201ENST00000378105 WWC2Q6AWC2 1192 aa12.39□□□□□ -0.43
PCDHGA1-201ENST00000378105 ISM2Q6H9L7 571 aa12.39□□□□□ -0.43
PCDHGA1-201ENST00000378105 RAB11FIP4Q86YS3 637 aa12.39□□□□□ -0.43
PCDHGA1-201ENST00000378105 UBAC1Q9BSL1 405 aa12.39□□□□□ -0.43
PCDHGA1-201ENST00000378105 LIG3P49916 1009 aa12.39□□□□□ -0.43
PCDHGA1-201ENST00000378105 SAFBQ15424 915 aaKnown RBP eCLIP12.39□□□□□ -0.43
PCDHGA1-201ENST00000378105 NBPF14Q5TI25 921 aa12.39□□□□□ -0.43
PCDHGA1-201ENST00000378105 TSPAN18Q96SJ8 248 aa12.39□□□□□ -0.43
PCDHGA1-201ENST00000378105 TRIM6Q9C030 488 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA1-201ENST00000378105 KCNQ2O43526 872 aa12.38□□□□□ -0.43
PCDHGA1-201ENST00000378105 SMC5Q8IY18 1101 aa12.38□□□□□ -0.43
PCDHGA1-201ENST00000378105 CTCFLQ8NI51 663 aaPredicted RBP12.38□□□□□ -0.43
PCDHGA1-201ENST00000378105 PPM1EQ8WY54 764 aa12.38□□□□□ -0.43
PCDHGA1-201ENST00000378105 STK32BQ9NY57 414 aa12.38□□□□□ -0.43
PCDHGA1-201ENST00000378105 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.38□□□□□ -0.43
PCDHGA1-201ENST00000378105 PAXBP1Q9Y5B6 917 aa12.38□□□□□ -0.43
PCDHGA1-201ENST00000378105 NEURL1BA8MQ27 555 aa12.38□□□□□ -0.43
PCDHGA1-201ENST00000378105 RXRBP28702 533 aa12.38□□□□□ -0.43
PCDHGA1-201ENST00000378105 CRKLP46109 303 aaKnown RBP12.38□□□□□ -0.43
PCDHGA1-201ENST00000378105 KIAA0825Q8IV33 1275 aa12.38□□□□□ -0.43
PCDHGA1-201ENST00000378105 MTRQ99707 1265 aa12.38□□□□□ -0.43
PCDHGA1-201ENST00000378105 RANBP6O60518 1105 aaKnown RBP12.38□□□□□ -0.43
PCDHGA1-201ENST00000378105 KRT27Q7Z3Y8 459 aa12.38□□□□□ -0.43
PCDHGA1-201ENST00000378105 KCNB2Q92953 911 aa12.38□□□□□ -0.43
PCDHGA1-201ENST00000378105 DBNDD2Q9BQY9 259 aa12.38□□□□□ -0.43
PCDHGA1-201ENST00000378105 NYXQ9GZU5 481 aa12.38□□□□□ -0.43
PCDHGA1-201ENST00000378105 FIBPO43427 364 aa12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 MCM2P49736 904 aa12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 NUCB2P80303 420 aa12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 HHATQ5VTY9 493 aa12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 FAM196AQ6ZSG2 479 aa12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 FNBP4Q8N3X1 1017 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 TCIRG1Q13488 830 aa12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 PKP1Q13835 747 aa12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 MUM1L1Q5H9M0 696 aa12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 LEKR1Q6ZMV7 388 aa12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 CCDC26Q8TAB7 109 aa12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 ZCWPW1Q9H0M4 648 aa12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 HTTP42858 3142 aa12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 CCDC69A6NI79 296 aa12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 K7ELQ4 463 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 SLC9C2Q5TAH2 1124 aa12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 USPL1Q5W0Q7 1092 aa12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 TBC1D22AQ8WUA7 517 aa12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 CDK5RAP2Q96SN8 1893 aa12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 MYSM1Q5VVJ2 828 aa12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 MKNK2Q9HBH9 465 aa12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 TMOD2Q9NZR1 351 aa12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 U3KPZ7 1027 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA1-201ENST00000378105 DNAH12Q6ZR08 3092 aa12.36□□□□□ -0.43
PCDHGA1-201ENST00000378105 CCDC15Q0P6D6 951 aa12.36□□□□□ -0.43
PCDHGA1-201ENST00000378105 TPD52L1Q16890 204 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA1-201ENST00000378105 SMIM5Q71RC9 77 aa12.36□□□□□ -0.43
PCDHGA1-201ENST00000378105 FERMT3Q86UX7 667 aa12.36□□□□□ -0.43
PCDHGA1-201ENST00000378105 PLEKHM2Q8IWE5 1019 aa12.36□□□□□ -0.43
PCDHGA1-201ENST00000378105 TATDN2Q93075 761 aa12.36□□□□□ -0.43
PCDHGA1-201ENST00000378105 LRRC2Q9BYS8 371 aa12.36□□□□□ -0.43
PCDHGA1-201ENST00000378105 ZC3H12CQ9C0D7 883 aaKnown RBP12.36□□□□□ -0.43
PCDHGA1-201ENST00000378105 SEC31AO94979 1220 aaKnown RBP12.36□□□□□ -0.43
PCDHGA1-201ENST00000378105 RHBDL3P58872 404 aa12.36□□□□□ -0.43
PCDHGA1-201ENST00000378105 LRSAM1Q6UWE0 723 aa12.36□□□□□ -0.43
PCDHGA1-201ENST00000378105 SAPCD2Q86UD0 394 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms