RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 FIBPO43427 364 aa15.16■□□□□ 0.02
TRIM40-206ENST00000376724 DHX16O60231 1041 aaKnown RBP15.16■□□□□ 0.02
TRIM40-206ENST00000376724 CHRNA5P30532 468 aa15.16■□□□□ 0.02
TRIM40-206ENST00000376724 GSTO1P78417 241 aa15.16■□□□□ 0.02
TRIM40-206ENST00000376724 EVX2Q03828 476 aa15.16■□□□□ 0.02
TRIM40-206ENST00000376724 MFSD14BQ5SR56 506 aa15.16■□□□□ 0.02
TRIM40-206ENST00000376724 CAVIN1Q6NZI2 390 aaKnown RBP15.16■□□□□ 0.02
TRIM40-206ENST00000376724 FAM173BQ6P4H8 233 aa15.16■□□□□ 0.02
TRIM40-206ENST00000376724 CHMP4CQ96CF2 233 aa15.16■□□□□ 0.02
TRIM40-206ENST00000376724 ZC3H12CQ9C0D7 883 aaKnown RBP15.16■□□□□ 0.02
TRIM40-206ENST00000376724 LY9Q9HBG7 655 aa15.16■□□□□ 0.02
TRIM40-206ENST00000376724 DCP1AQ9NPI6 582 aaPredicted RBP15.16■□□□□ 0.02
TRIM40-206ENST00000376724 BAZ2AQ9UIF9 1905 aaKnown RBP15.15■□□□□ 0.02
TRIM40-206ENST00000376724 TIAM2Q8IVF5 1701 aa15.15■□□□□ 0.02
TRIM40-206ENST00000376724 PRDM1O75626 825 aa15.15■□□□□ 0.02
TRIM40-206ENST00000376724 GTF2IP78347 998 aa15.15■□□□□ 0.02
TRIM40-206ENST00000376724 APOA5Q6Q788 366 aa15.15■□□□□ 0.02
TRIM40-206ENST00000376724 MICU3Q86XE3 530 aa15.15■□□□□ 0.02
TRIM40-206ENST00000376724 MYL10Q9BUA6 226 aa15.15■□□□□ 0.02
TRIM40-206ENST00000376724 ANAPC4Q9UJX5 808 aa15.15■□□□□ 0.02
TRIM40-206ENST00000376724 LRRC37AA6NMS7 1700 aa15.15■□□□□ 0.02
TRIM40-206ENST00000376724 MAST2Q6P0Q8 1798 aa15.15■□□□□ 0.02
TRIM40-206ENST00000376724 CCDC69A6NI79 296 aa15.14■□□□□ 0.01
TRIM40-206ENST00000376724 GADD45BO75293 160 aaPredicted RBP15.14■□□□□ 0.01
TRIM40-206ENST00000376724 USP5P45974 858 aa15.14■□□□□ 0.01
TRIM40-206ENST00000376724 METAP2P50579 478 aaKnown RBP eCLIP15.14■□□□□ 0.01
TRIM40-206ENST00000376724 SART3Q15020 963 aaKnown RBP15.14■□□□□ 0.01
TRIM40-206ENST00000376724 DOK7Q18PE1 504 aa15.14■□□□□ 0.01
TRIM40-206ENST00000376724 GIMAP6Q6P9H5 292 aa15.14■□□□□ 0.01
TRIM40-206ENST00000376724 SH3RF3Q8TEJ3 882 aaPredicted RBP15.14■□□□□ 0.01
TRIM40-206ENST00000376724 NOL10Q9BSC4 688 aaKnown RBP15.14■□□□□ 0.01
TRIM40-206ENST00000376724 ATP8A2Q9NTI2 1148 aa15.14■□□□□ 0.01
TRIM40-206ENST00000376724 KIF3AQ9Y496 699 aa15.14■□□□□ 0.01
TRIM40-206ENST00000376724 TCHHQ07283 1943 aa15.14■□□□□ 0.01
TRIM40-206ENST00000376724 ERICH2A1L162 156 aa15.14■□□□□ 0.01
TRIM40-206ENST00000376724 G3V3G9 751 aa15.14■□□□□ 0.01
TRIM40-206ENST00000376724 BAG3O95817 575 aa15.14■□□□□ 0.01
TRIM40-206ENST00000376724 CYP2D6P10635 497 aa15.14■□□□□ 0.01
TRIM40-206ENST00000376724 ADD1P35611 737 aaKnown RBP15.14■□□□□ 0.01
TRIM40-206ENST00000376724 GUCY1B3Q02153 619 aa15.14■□□□□ 0.01
TRIM40-206ENST00000376724 DCAF8Q5TAQ9 597 aa15.14■□□□□ 0.01
TRIM40-206ENST00000376724 TMED8Q6PL24 325 aaPredicted RBP15.14■□□□□ 0.01
TRIM40-206ENST00000376724 ESR2Q92731 530 aa15.14■□□□□ 0.01
TRIM40-206ENST00000376724 MCM9Q9NXL9 1143 aa15.14■□□□□ 0.01
TRIM40-206ENST00000376724 RBM27Q9P2N5 1060 aaKnown RBP15.14■□□□□ 0.01
TRIM40-206ENST00000376724 SLC12A7Q9Y666 1083 aa15.14■□□□□ 0.01
TRIM40-206ENST00000376724 ZBTB43O43298 467 aa15.13■□□□□ 0.01
TRIM40-206ENST00000376724 RANBP6O60518 1105 aaKnown RBP15.13■□□□□ 0.01
TRIM40-206ENST00000376724 LDHCP07864 332 aa15.13■□□□□ 0.01
TRIM40-206ENST00000376724 FDPSP14324 419 aaKnown RBP15.13■□□□□ 0.01
TRIM40-206ENST00000376724 LIFRP42702 1097 aa15.13■□□□□ 0.01
TRIM40-206ENST00000376724 WTAPQ15007 396 aa15.13■□□□□ 0.01
TRIM40-206ENST00000376724 UBAC1Q9BSL1 405 aa15.13■□□□□ 0.01
TRIM40-206ENST00000376724 COA1Q9GZY4 146 aa15.13■□□□□ 0.01
TRIM40-206ENST00000376724 TAOK2Q9UL54 1235 aa15.13■□□□□ 0.01
TRIM40-206ENST00000376724 LTBP1Q14766 1721 aa15.13■□□□□ 0.01
TRIM40-206ENST00000376724 MROH7-TTC4A0A0A0MT08 1334 aa15.13■□□□□ 0.01
TRIM40-206ENST00000376724 USP17L8P0C7I0 530 aa15.12■□□□□ 0.01
TRIM40-206ENST00000376724 SYNE3Q6ZMZ3 975 aa15.12■□□□□ 0.01
TRIM40-206ENST00000376724 SGMS1Q86VZ5 419 aa15.12■□□□□ 0.01
TRIM40-206ENST00000376724 TGFBRAP1Q8WUH2 860 aa15.12■□□□□ 0.01
TRIM40-206ENST00000376724 GOLGA8AA7E2F4 631 aa15.12■□□□□ 0.01
TRIM40-206ENST00000376724 F8W031 263 aaPredicted RBP15.12■□□□□ 0.01
TRIM40-206ENST00000376724 CDC27P30260 824 aa15.12■□□□□ 0.01
TRIM40-206ENST00000376724 BTDP43251 543 aa15.12■□□□□ 0.01
TRIM40-206ENST00000376724 STYK1Q6J9G0 422 aa15.12■□□□□ 0.01
TRIM40-206ENST00000376724 TBC1D22AQ8WUA7 517 aa15.12■□□□□ 0.01
TRIM40-206ENST00000376724 ORC3Q9UBD5 711 aaPredicted RBP15.12■□□□□ 0.01
TRIM40-206ENST00000376724 ARPP21Q9UBL0 812 aaPredicted RBP15.12■□□□□ 0.01
TRIM40-206ENST00000376724 DUOX1Q9NRD9 1551 aa15.11■□□□□ 0.01
TRIM40-206ENST00000376724 GOLGA6L3A6NEY3 463 aa15.11■□□□□ 0.01
TRIM40-206ENST00000376724 MBD3O95983 291 aa15.11■□□□□ 0.01
TRIM40-206ENST00000376724 RTFDC1Q9BY42 306 aaPredicted RBP15.11■□□□□ 0.01
TRIM40-206ENST00000376724 TFIP11Q9UBB9 837 aaKnown RBP15.11■□□□□ 0.01
TRIM40-206ENST00000376724 KRT85P78386 507 aa15.1■□□□□ 0.01
TRIM40-206ENST00000376724 OTUD7BQ6GQQ9 843 aa15.1■□□□□ 0.01
TRIM40-206ENST00000376724 TMEM87AQ8NBN3 555 aa15.1■□□□□ 0.01
TRIM40-206ENST00000376724 MXD3Q9BW11 206 aa15.1■□□□□ 0.01
TRIM40-206ENST00000376724 TNKSO95271 1327 aa15.1■□□□□ 0.01
TRIM40-206ENST00000376724 IGSF3O75054 1194 aa15.1■□□□□ 0.01
TRIM40-206ENST00000376724 SLC3A2P08195 630 aaKnown RBP15.1■□□□□ 0.01
TRIM40-206ENST00000376724 PPP4CP60510 307 aa15.1■□□□□ 0.01
TRIM40-206ENST00000376724 RESTQ13127 1097 aa15.1■□□□□ 0.01
TRIM40-206ENST00000376724 MAPKAPK5Q8IW41 473 aa15.1■□□□□ 0.01
TRIM40-206ENST00000376724 PHKBQ93100 1093 aa15.1■□□□□ 0.01
TRIM40-206ENST00000376724 EYA3Q99504 573 aa15.1■□□□□ 0.01
TRIM40-206ENST00000376724 DBNDD1Q9H9R9 158 aa15.1■□□□□ 0.01
TRIM40-206ENST00000376724 FAM205AQ6ZU69 1335 aa15.1■□□□□ 0.01
TRIM40-206ENST00000376724 MYH2Q9UKX2 1941 aa15.1■□□□□ 0.01
TRIM40-206ENST00000376724 CSPP1Q1MSJ5 1256 aa15.09■□□□□ 0.01
TRIM40-206ENST00000376724 SBK1Q52WX2 424 aa15.09■□□□□ 0.01
TRIM40-206ENST00000376724 FAM47AQ5JRC9 791 aa15.09■□□□□ 0.01
TRIM40-206ENST00000376724 CPLX2Q6PUV4 134 aaKnown RBP15.09■□□□□ 0.01
TRIM40-206ENST00000376724 NUP133Q8WUM0 1156 aa15.09■□□□□ 0.01
TRIM40-206ENST00000376724 ZSCAN10Q96SZ4 725 aaPredicted RBP15.09■□□□□ 0.01
TRIM40-206ENST00000376724 TMEM63CQ9P1W3 806 aa15.09■□□□□ 0.01
TRIM40-206ENST00000376724 SAP30BPQ9UHR5 308 aaKnown RBP15.09■□□□□ 0.01
TRIM40-206ENST00000376724 CDKL5O76039 1030 aa15.09■□□□□ 0.01
TRIM40-206ENST00000376724 PDE4BQ07343 736 aa15.09■□□□□ 0.01
TRIM40-206ENST00000376724 ZSCAN23Q3MJ62 389 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms