RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 APOA5Q6Q788 366 aa13.41□□□□□ -0.26
DDR1-227ENST00000376570 ECM2O94769 699 aaPredicted RBP13.41□□□□□ -0.26
DDR1-227ENST00000376570 CTDNEP1O95476 244 aa13.41□□□□□ -0.26
DDR1-227ENST00000376570 ATP1A3P13637 1013 aa13.41□□□□□ -0.26
DDR1-227ENST00000376570 IDEP14735 1019 aa13.41□□□□□ -0.26
DDR1-227ENST00000376570 RAD51AP2Q09MP3 1159 aa13.41□□□□□ -0.26
DDR1-227ENST00000376570 DOK7Q18PE1 504 aa13.41□□□□□ -0.26
DDR1-227ENST00000376570 TPTE2Q6XPS3 522 aa13.41□□□□□ -0.26
DDR1-227ENST00000376570 C3orf67Q6ZVT6 689 aa13.41□□□□□ -0.26
DDR1-227ENST00000376570 MARCH10Q8NA82 808 aaPredicted RBP13.41□□□□□ -0.26
DDR1-227ENST00000376570 HINFPQ9BQA5 517 aa13.41□□□□□ -0.26
DDR1-227ENST00000376570 KIF13AQ9H1H9 1805 aa13.41□□□□□ -0.26
DDR1-227ENST00000376570 CARMIL3Q8ND23 1372 aa13.41□□□□□ -0.26
DDR1-227ENST00000376570 UFL1O94874 794 aa13.41□□□□□ -0.26
DDR1-227ENST00000376570 USP17L8P0C7I0 530 aa13.41□□□□□ -0.26
DDR1-227ENST00000376570 RPS8P62241 208 aaKnown RBP13.41□□□□□ -0.26
DDR1-227ENST00000376570 FAM196AQ6ZSG2 479 aa13.41□□□□□ -0.26
DDR1-227ENST00000376570 USP21Q9UK80 565 aa13.41□□□□□ -0.26
DDR1-227ENST00000376570 TNKSO95271 1327 aa13.4□□□□□ -0.26
DDR1-227ENST00000376570 UBN2Q6ZU65 1347 aa13.4□□□□□ -0.26
DDR1-227ENST00000376570 TSPY3P0CV98 308 aa13.4□□□□□ -0.26
DDR1-227ENST00000376570 TSPY8P0CW00 308 aa13.4□□□□□ -0.26
DDR1-227ENST00000376570 TOP1P11387 765 aaKnown RBP13.4□□□□□ -0.26
DDR1-227ENST00000376570 HIBADHP31937 336 aaKnown RBP13.4□□□□□ -0.26
DDR1-227ENST00000376570 NAP1L1P55209 391 aaKnown RBP13.4□□□□□ -0.26
DDR1-227ENST00000376570 AKNAD1Q5T1N1 836 aa13.4□□□□□ -0.26
DDR1-227ENST00000376570 OXER1Q8TDS5 423 aa13.4□□□□□ -0.26
DDR1-227ENST00000376570 CCDC34Q96HJ3 373 aa13.4□□□□□ -0.26
DDR1-227ENST00000376570 ISCA1Q9BUE6 129 aa13.4□□□□□ -0.26
DDR1-227ENST00000376570 KAT14Q9H8E8 782 aa13.4□□□□□ -0.26
DDR1-227ENST00000376570 TNS3Q68CZ2 1445 aa13.4□□□□□ -0.26
DDR1-227ENST00000376570 USP32Q8NFA0 1604 aa13.4□□□□□ -0.26
DDR1-227ENST00000376570 RIOK3O14730 519 aaKnown RBP13.4□□□□□ -0.26
DDR1-227ENST00000376570 COL15A1P39059 1388 aa13.4□□□□□ -0.26
DDR1-227ENST00000376570 RABL6Q3YEC7 729 aaPredicted RBP13.4□□□□□ -0.26
DDR1-227ENST00000376570 TBC1D9BQ66K14 1250 aa13.4□□□□□ -0.26
DDR1-227ENST00000376570 FBXO18Q8NFZ0 1043 aa13.4□□□□□ -0.26
DDR1-227ENST00000376570 ZNF75DP51815 510 aa13.39□□□□□ -0.27
DDR1-227ENST00000376570 PPARAQ07869 468 aa13.39□□□□□ -0.27
DDR1-227ENST00000376570 NKX2-3Q8TAU0 364 aa13.39□□□□□ -0.27
DDR1-227ENST00000376570 XPO4Q9C0E2 1151 aaKnown RBP13.39□□□□□ -0.27
DDR1-227ENST00000376570 SCAF8Q9UPN6 1271 aaKnown RBP13.39□□□□□ -0.27
DDR1-227ENST00000376570 ZNF654Q8IZM8 581 aa13.39□□□□□ -0.27
DDR1-227ENST00000376570 UBA5Q9GZZ9 404 aa13.39□□□□□ -0.27
DDR1-227ENST00000376570 GPCPD1Q9NPB8 672 aa13.39□□□□□ -0.27
DDR1-227ENST00000376570 SERTAD1Q9UHV2 236 aa13.39□□□□□ -0.27
DDR1-227ENST00000376570 HOOK1Q9UJC3 728 aaKnown RBP13.39□□□□□ -0.27
DDR1-227ENST00000376570 CCDC194A0A1B0GVG4 234 aa13.39□□□□□ -0.27
DDR1-227ENST00000376570 TOM1O60784 492 aa13.39□□□□□ -0.27
DDR1-227ENST00000376570 PLEKHA8P1O95397 391 aa13.39□□□□□ -0.27
DDR1-227ENST00000376570 KCNG4Q8TDN1 519 aa13.39□□□□□ -0.27
DDR1-227ENST00000376570 CACTINQ8WUQ7 758 aaKnown RBP13.39□□□□□ -0.27
DDR1-227ENST00000376570 DNAI1Q9UI46 699 aa13.39□□□□□ -0.27
DDR1-227ENST00000376570 RIPOR2Q9Y4F9 1068 aa13.39□□□□□ -0.27
DDR1-227ENST00000376570 FAM196BA6NMK8 535 aa13.38□□□□□ -0.27
DDR1-227ENST00000376570 TRIM37O94972 964 aa13.38□□□□□ -0.27
DDR1-227ENST00000376570 CACNB3P54284 484 aa13.38□□□□□ -0.27
DDR1-227ENST00000376570 TFAP4Q01664 338 aa13.38□□□□□ -0.27
DDR1-227ENST00000376570 ZFP91Q96JP5 570 aaPredicted RBP13.38□□□□□ -0.27
DDR1-227ENST00000376570 KCNH3Q9ULD8 1083 aa13.38□□□□□ -0.27
DDR1-227ENST00000376570 PATL2C9JE40 543 aaKnown RBP13.38□□□□□ -0.27
DDR1-227ENST00000376570 FKBP15Q5T1M5 1219 aa13.38□□□□□ -0.27
DDR1-227ENST00000376570 SYT10Q6XYQ8 523 aa13.38□□□□□ -0.27
DDR1-227ENST00000376570 CLEC10AQ8IUN9 316 aa13.38□□□□□ -0.27
DDR1-227ENST00000376570 STRBPQ96SI9 672 aaKnown RBP13.38□□□□□ -0.27
DDR1-227ENST00000376570 CRNKL1Q9BZJ0 848 aaKnown RBP13.38□□□□□ -0.27
DDR1-227ENST00000376570 ANTXR2P58335 489 aa13.38□□□□□ -0.27
DDR1-227ENST00000376570 CNBD1Q8NA66 436 aa13.38□□□□□ -0.27
DDR1-227ENST00000376570 SMARCE1Q969G3 411 aa13.38□□□□□ -0.27
DDR1-227ENST00000376570 KRT23Q9C075 422 aa13.38□□□□□ -0.27
DDR1-227ENST00000376570 TANGO6Q9C0B7 1094 aa13.38□□□□□ -0.27
DDR1-227ENST00000376570 RNF41Q9H4P4 317 aaPredicted RBP13.38□□□□□ -0.27
DDR1-227ENST00000376570 NCOA3Q9Y6Q9 1424 aa13.38□□□□□ -0.27
DDR1-227ENST00000376570 NRXN3Q9Y4C0 1643 aa13.38□□□□□ -0.27
DDR1-227ENST00000376570 USP17L3A6NCW0 530 aa13.37□□□□□ -0.27
DDR1-227ENST00000376570 USP17L4A6NCW7 530 aa13.37□□□□□ -0.27
DDR1-227ENST00000376570 ZNF500O60304 480 aaPredicted RBP13.37□□□□□ -0.27
DDR1-227ENST00000376570 IL6STP40189 918 aaPredicted RBP13.37□□□□□ -0.27
DDR1-227ENST00000376570 ADKP55263 362 aaKnown RBP13.37□□□□□ -0.27
DDR1-227ENST00000376570 ZYXQ15942 572 aaKnown RBP13.37□□□□□ -0.27
DDR1-227ENST00000376570 USP17L1Q7RTZ2 530 aa13.37□□□□□ -0.27
DDR1-227ENST00000376570 LZTFL1Q9NQ48 299 aa13.37□□□□□ -0.27
DDR1-227ENST00000376570 PCDHB6Q9Y5E3 794 aa13.37□□□□□ -0.27
DDR1-227ENST00000376570 SOS2Q07890 1332 aaPredicted RBP13.37□□□□□ -0.27
DDR1-227ENST00000376570 LDHBP07195 334 aaKnown RBP13.37□□□□□ -0.27
DDR1-227ENST00000376570 GRIN1Q05586 938 aa13.37□□□□□ -0.27
DDR1-227ENST00000376570 CCDC144BQ3MJ40 725 aa13.37□□□□□ -0.27
DDR1-227ENST00000376570 TRAPPC3LQ5T215 181 aa13.37□□□□□ -0.27
DDR1-227ENST00000376570 SOGA3Q5TF21 947 aa13.37□□□□□ -0.27
DDR1-227ENST00000376570 JAKMIP3Q5VZ66 844 aa13.37□□□□□ -0.27
DDR1-227ENST00000376570 USP49Q70CQ1 688 aa13.37□□□□□ -0.27
DDR1-227ENST00000376570 DESI2Q9BSY9 194 aa13.37□□□□□ -0.27
DDR1-227ENST00000376570 BCL2L12Q9HB09 334 aa13.37□□□□□ -0.27
DDR1-227ENST00000376570 POLD4Q9HCU8 107 aa13.37□□□□□ -0.27
DDR1-227ENST00000376570 KNDC1Q76NI1 1749 aa13.37□□□□□ -0.27
DDR1-227ENST00000376570 TPM3P06753 285 aa13.37□□□□□ -0.27
DDR1-227ENST00000376570 FDPSP14324 419 aaKnown RBP13.37□□□□□ -0.27
DDR1-227ENST00000376570 CRACR2BQ8N4Y2 399 aaPredicted RBP13.37□□□□□ -0.27
DDR1-227ENST00000376570 CCDC94Q9BW85 323 aaPredicted RBP13.37□□□□□ -0.27
DDR1-227ENST00000376570 GTF2IP78347 998 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms