RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 STK11IPQ8N1F8 1099 aa13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 SUGCTQ9HAC7 445 aa13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 ATP8B1O43520 1251 aa13.18□□□□□ -0.3
TM9SF2-201ENST00000376387 FGAP02671 866 aa13.18□□□□□ -0.3
TM9SF2-201ENST00000376387 WWC2Q6AWC2 1192 aa13.18□□□□□ -0.3
TM9SF2-201ENST00000376387 MB21D2Q8IYB1 491 aaPredicted RBP13.18□□□□□ -0.3
TM9SF2-201ENST00000376387 PHKBQ93100 1093 aa13.18□□□□□ -0.3
TM9SF2-201ENST00000376387 SENP2Q9HC62 589 aa13.18□□□□□ -0.3
TM9SF2-201ENST00000376387 PUF60Q9UHX1 559 aaKnown RBP13.18□□□□□ -0.3
TM9SF2-201ENST00000376387 N4BP1O75113 896 aaKnown RBP13.18□□□□□ -0.3
TM9SF2-201ENST00000376387 TPM1P09493 284 aa13.18□□□□□ -0.3
TM9SF2-201ENST00000376387 VPS37DQ86XT2 251 aa13.18□□□□□ -0.3
TM9SF2-201ENST00000376387 MAP3K14Q99558 947 aa13.17□□□□□ -0.3
TM9SF2-201ENST00000376387 PUS3Q9BZE2 481 aaKnown RBP13.17□□□□□ -0.3
TM9SF2-201ENST00000376387 GRIN1Q05586 938 aa13.17□□□□□ -0.3
TM9SF2-201ENST00000376387 WASHC4Q2M389 1173 aa13.17□□□□□ -0.3
TM9SF2-201ENST00000376387 FCHSD1Q86WN1 690 aa13.17□□□□□ -0.3
TM9SF2-201ENST00000376387 GRAMD1CQ8IYS0 662 aa13.17□□□□□ -0.3
TM9SF2-201ENST00000376387 CCDC12Q8WUD4 166 aaPredicted RBP13.17□□□□□ -0.3
TM9SF2-201ENST00000376387 MED15Q96RN5 788 aa13.17□□□□□ -0.3
TM9SF2-201ENST00000376387 C19orf44Q9H6X5 657 aa13.17□□□□□ -0.3
TM9SF2-201ENST00000376387 LZTFL1Q9NQ48 299 aa13.17□□□□□ -0.3
TM9SF2-201ENST00000376387 C4AP0C0L4 1744 aa13.17□□□□□ -0.3
TM9SF2-201ENST00000376387 C4BP0C0L5 1744 aa13.17□□□□□ -0.3
TM9SF2-201ENST00000376387 SOWAHDA6NJG2 315 aa13.17□□□□□ -0.3
TM9SF2-201ENST00000376387 DHX8Q14562 1220 aaKnown RBP13.17□□□□□ -0.3
TM9SF2-201ENST00000376387 LMOD2Q6P5Q4 547 aa13.17□□□□□ -0.3
TM9SF2-201ENST00000376387 FOXR1Q6PIV2 292 aa13.17□□□□□ -0.3
TM9SF2-201ENST00000376387 OLFM4Q6UX06 510 aa13.17□□□□□ -0.3
TM9SF2-201ENST00000376387 RABGGTAQ92696 567 aa13.17□□□□□ -0.3
TM9SF2-201ENST00000376387 MYO1CO00159 1063 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 GCP02774 474 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 MCM6Q14566 821 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 ESCO1Q5FWF5 840 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 RESP18Q5W5W9 173 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 GOLGA1Q92805 767 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 PNKPQ96T60 521 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 ALG1Q9BT22 464 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 PUS7LQ9H0K6 701 aaKnown RBP13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 PDE11AQ9HCR9 933 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 A0A1B0GUL7 405 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 SCARF1Q14162 830 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 KRT40Q6A162 431 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 PI16Q6UXB8 463 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 FBXL16Q8N461 479 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 CNNM3Q8NE01 707 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 TEX13AQ9BXU3 409 aaPredicted RBP13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 ANKZF1Q9H8Y5 726 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 SEC31BQ9NQW1 1179 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 SAMSN1Q9NSI8 373 aaKnown RBP13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 RSPH14Q9UHP6 348 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 ADORA1P30542 326 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 TXLNAP40222 546 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 SLC52A2Q9HAB3 445 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 NFE2L3Q9Y4A8 694 aa13.16□□□□□ -0.3
TM9SF2-201ENST00000376387 OVOS2A0A0G2JMS6 1433 aa13.15□□□□□ -0.3
TM9SF2-201ENST00000376387 KDM6AO15550 1401 aaPredicted RBP13.15□□□□□ -0.3
TM9SF2-201ENST00000376387 ARHGEF25Q86VW2 580 aa13.15□□□□□ -0.3
TM9SF2-201ENST00000376387 NBPF3Q9H094 633 aa13.15□□□□□ -0.3
TM9SF2-201ENST00000376387 ATG3Q9NT62 314 aa13.15□□□□□ -0.3
TM9SF2-201ENST00000376387 VPS18Q9P253 973 aa13.15□□□□□ -0.3
TM9SF2-201ENST00000376387 MAN1B1Q9UKM7 699 aa13.15□□□□□ -0.3
TM9SF2-201ENST00000376387 KCNH3Q9ULD8 1083 aa13.15□□□□□ -0.3
TM9SF2-201ENST00000376387 MAP2K7O14733 419 aa13.15□□□□□ -0.3
TM9SF2-201ENST00000376387 STX10O60499 249 aa13.15□□□□□ -0.3
TM9SF2-201ENST00000376387 ABL1P00519 1130 aa13.15□□□□□ -0.3
TM9SF2-201ENST00000376387 MDM2Q00987 491 aaPredicted RBP13.15□□□□□ -0.3
TM9SF2-201ENST00000376387 GPS2Q13227 327 aa13.15□□□□□ -0.3
TM9SF2-201ENST00000376387 IMMTQ16891 758 aaKnown RBP13.15□□□□□ -0.3
TM9SF2-201ENST00000376387 SPECC1LQ69YQ0 1117 aa13.15□□□□□ -0.3
TM9SF2-201ENST00000376387 ANKLE2Q86XL3 938 aa13.15□□□□□ -0.3
TM9SF2-201ENST00000376387 ARFGEF2Q9Y6D5 1785 aa13.15□□□□□ -0.3
TM9SF2-201ENST00000376387 DHX16O60231 1041 aaKnown RBP13.14□□□□□ -0.31
TM9SF2-201ENST00000376387 CYB5R4Q7L1T6 521 aa13.14□□□□□ -0.31
TM9SF2-201ENST00000376387 KCNH5Q8NCM2 988 aa13.14□□□□□ -0.31
TM9SF2-201ENST00000376387 MYL10Q9BUA6 226 aa13.14□□□□□ -0.31
TM9SF2-201ENST00000376387 TEX33O43247 280 aa13.14□□□□□ -0.31
TM9SF2-201ENST00000376387 RAD9BQ6WBX8 426 aa13.14□□□□□ -0.31
TM9SF2-201ENST00000376387 CPLX3Q8WVH0 158 aa13.14□□□□□ -0.31
TM9SF2-201ENST00000376387 INCENPQ9NQS7 918 aa13.14□□□□□ -0.31
TM9SF2-201ENST00000376387 PPP6R2O75170 966 aa13.14□□□□□ -0.31
TM9SF2-201ENST00000376387 CHMP4BP1P59074 171 aa13.14□□□□□ -0.31
TM9SF2-201ENST00000376387 CCDC102BQ68D86 513 aa13.14□□□□□ -0.31
TM9SF2-201ENST00000376387 RASSF4Q9H2L5 321 aa13.14□□□□□ -0.31
TM9SF2-201ENST00000376387 CUTAO60888 179 aa13.13□□□□□ -0.31
TM9SF2-201ENST00000376387 ZNF18P17022 549 aa13.13□□□□□ -0.31
TM9SF2-201ENST00000376387 BEND6Q5SZJ8 279 aaPredicted RBP13.13□□□□□ -0.31
TM9SF2-201ENST00000376387 EXOC4Q96A65 974 aa13.13□□□□□ -0.31
TM9SF2-201ENST00000376387 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.13□□□□□ -0.31
TM9SF2-201ENST00000376387 ECM29Q5VYK3 1845 aa13.13□□□□□ -0.31
TM9SF2-201ENST00000376387 DDX60Q8IY21 1712 aaKnown RBP13.13□□□□□ -0.31
TM9SF2-201ENST00000376387 NCOA7Q8NI08 942 aa13.13□□□□□ -0.31
TM9SF2-201ENST00000376387 GOLGA5Q8TBA6 731 aa13.13□□□□□ -0.31
TM9SF2-201ENST00000376387 CALR3Q96L12 384 aaKnown RBP13.13□□□□□ -0.31
TM9SF2-201ENST00000376387 RGPD5Q99666 1765 aa13.13□□□□□ -0.31
TM9SF2-201ENST00000376387 FAM237AA0A1B0GTK4 181 aa13.13□□□□□ -0.31
TM9SF2-201ENST00000376387 RALYLQ86SE5 291 aaKnown RBP13.13□□□□□ -0.31
TM9SF2-201ENST00000376387 SRLQ86TD4 932 aa13.13□□□□□ -0.31
TM9SF2-201ENST00000376387 MICU3Q86XE3 530 aa13.13□□□□□ -0.31
TM9SF2-201ENST00000376387 CCDC85AQ96PX6 553 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms