RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 HHIPL2Q6UWX4 724 aa12.44□□□□□ -0.42
PDPN-203ENST00000376061 CERS3Q8IU89 383 aa12.44□□□□□ -0.42
PDPN-203ENST00000376061 TBC1D10CQ8IV04 446 aa12.44□□□□□ -0.42
PDPN-203ENST00000376061 JDP2Q8WYK2 163 aa12.44□□□□□ -0.42
PDPN-203ENST00000376061 TEKT1Q969V4 418 aa12.44□□□□□ -0.42
PDPN-203ENST00000376061 GMLQ99445 158 aa12.44□□□□□ -0.42
PDPN-203ENST00000376061 TBC1D2Q9BYX2 928 aa12.44□□□□□ -0.42
PDPN-203ENST00000376061 ZSWIM6Q9HCJ5 1215 aa12.44□□□□□ -0.42
PDPN-203ENST00000376061 E7EWF7 191 aa12.43□□□□□ -0.42
PDPN-203ENST00000376061 ST18O60284 1047 aa12.43□□□□□ -0.42
PDPN-203ENST00000376061 CPA1P15085 419 aa12.43□□□□□ -0.42
PDPN-203ENST00000376061 PLCG2P16885 1265 aa12.43□□□□□ -0.42
PDPN-203ENST00000376061 YBX3P16989 372 aaKnown RBP eCLIP12.43□□□□□ -0.42
PDPN-203ENST00000376061 CRKP46108 304 aa12.43□□□□□ -0.42
PDPN-203ENST00000376061 NEK4P51957 841 aa12.43□□□□□ -0.42
PDPN-203ENST00000376061 HDLBPQ00341 1268 aaKnown RBP12.43□□□□□ -0.42
PDPN-203ENST00000376061 CXCL9Q07325 125 aa12.43□□□□□ -0.42
PDPN-203ENST00000376061 BECN1Q14457 450 aa12.43□□□□□ -0.42
PDPN-203ENST00000376061 ATP8A2Q9NTI2 1148 aa12.43□□□□□ -0.42
PDPN-203ENST00000376061 ZNF213O14771 459 aa12.43□□□□□ -0.42
PDPN-203ENST00000376061 PSMA5P28066 241 aa12.43□□□□□ -0.42
PDPN-203ENST00000376061 BLOC1S2Q6QNY1 142 aa12.43□□□□□ -0.42
PDPN-203ENST00000376061 ARHGAP27Q6ZUM4 889 aa12.43□□□□□ -0.42
PDPN-203ENST00000376061 HSCBQ8IWL3 235 aa12.43□□□□□ -0.42
PDPN-203ENST00000376061 TEX11Q8IYF3 940 aa12.43□□□□□ -0.42
PDPN-203ENST00000376061 ZDHHC15Q96MV8 337 aa12.43□□□□□ -0.42
PDPN-203ENST00000376061 TTC14Q96N46 770 aa12.43□□□□□ -0.42
PDPN-203ENST00000376061 DCP1AQ9NPI6 582 aaPredicted RBP12.43□□□□□ -0.42
PDPN-203ENST00000376061 CYP46A1Q9Y6A2 500 aa12.43□□□□□ -0.42
PDPN-203ENST00000376061 RPS6KB1P23443 525 aa12.42□□□□□ -0.42
PDPN-203ENST00000376061 USP5P45974 858 aa12.42□□□□□ -0.42
PDPN-203ENST00000376061 CIAPIN1Q6FI81 312 aa12.42□□□□□ -0.42
PDPN-203ENST00000376061 APOBEC3HQ6NTF7 200 aaKnown RBP12.42□□□□□ -0.42
PDPN-203ENST00000376061 RUFY3Q7L099 469 aa12.42□□□□□ -0.42
PDPN-203ENST00000376061 NEK1Q96PY6 1258 aa12.42□□□□□ -0.42
PDPN-203ENST00000376061 MRIQ9BWK5 157 aa12.42□□□□□ -0.42
PDPN-203ENST00000376061 MKRN1Q9UHC7 482 aaKnown RBP12.42□□□□□ -0.42
PDPN-203ENST00000376061 SERPINA10Q9UK55 444 aa12.42□□□□□ -0.42
PDPN-203ENST00000376061 PCDHAC2Q9Y5I4 1007 aa12.42□□□□□ -0.42
PDPN-203ENST00000376061 MYH8P13535 1937 aa12.41□□□□□ -0.42
PDPN-203ENST00000376061 SIPA1L1O43166 1804 aa12.41□□□□□ -0.42
PDPN-203ENST00000376061 FLT1P17948 1338 aa12.41□□□□□ -0.42
PDPN-203ENST00000376061 NEDD4P46934 1319 aa12.41□□□□□ -0.42
PDPN-203ENST00000376061 ROBO3Q96MS0 1386 aa12.41□□□□□ -0.42
PDPN-203ENST00000376061 CYP2D7A0A087X1C5 515 aa12.41□□□□□ -0.42
PDPN-203ENST00000376061 FZD9O00144 591 aa12.41□□□□□ -0.42
PDPN-203ENST00000376061 LMNB1P20700 586 aa12.41□□□□□ -0.42
PDPN-203ENST00000376061 PPARAQ07869 468 aa12.41□□□□□ -0.42
PDPN-203ENST00000376061 CDC42EP5Q6NZY7 148 aa12.41□□□□□ -0.42
PDPN-203ENST00000376061 CTR9Q6PD62 1173 aa12.41□□□□□ -0.42
PDPN-203ENST00000376061 AGBL3Q8NEM8 1001 aa12.41□□□□□ -0.42
PDPN-203ENST00000376061 IL27Q8NEV9 243 aa12.41□□□□□ -0.42
PDPN-203ENST00000376061 TGFBRAP1Q8WUH2 860 aa12.41□□□□□ -0.42
PDPN-203ENST00000376061 ARPP21Q9UBL0 812 aaPredicted RBP12.41□□□□□ -0.42
PDPN-203ENST00000376061 ANAPC4Q9UJX5 808 aa12.41□□□□□ -0.42
PDPN-203ENST00000376061 ZNF541Q9H0D2 1346 aa12.4□□□□□ -0.42
PDPN-203ENST00000376061 MINDY4BA8MYZ0 360 aa12.4□□□□□ -0.42
PDPN-203ENST00000376061 USP17L12C9JPN9 530 aa12.4□□□□□ -0.42
PDPN-203ENST00000376061 USP17L21D6R901 530 aa12.4□□□□□ -0.42
PDPN-203ENST00000376061 SMIM22K7EJ46 135 aa12.4□□□□□ -0.42
PDPN-203ENST00000376061 K7ELQ4 463 aaPredicted RBP12.4□□□□□ -0.42
PDPN-203ENST00000376061 HMGB1P09429 215 aaKnown RBP12.4□□□□□ -0.42
PDPN-203ENST00000376061 CYP2D6P10635 497 aa12.4□□□□□ -0.42
PDPN-203ENST00000376061 SLC4A3P48751 1232 aa12.4□□□□□ -0.42
PDPN-203ENST00000376061 CTDSPL2Q05D32 466 aa12.4□□□□□ -0.42
PDPN-203ENST00000376061 TNIP1Q15025 636 aa12.4□□□□□ -0.42
PDPN-203ENST00000376061 SBK1Q52WX2 424 aa12.4□□□□□ -0.42
PDPN-203ENST00000376061 MAPKAPK5Q8IW41 473 aa12.4□□□□□ -0.42
PDPN-203ENST00000376061 STAG1Q8WVM7 1258 aa12.4□□□□□ -0.42
PDPN-203ENST00000376061 TCEANC2Q96MN5 208 aa12.4□□□□□ -0.42
PDPN-203ENST00000376061 PDRG1Q9NUG6 133 aa12.4□□□□□ -0.42
PDPN-203ENST00000376061 TACC3Q9Y6A5 838 aa12.4□□□□□ -0.42
PDPN-203ENST00000376061 WDHD1O75717 1129 aaPredicted RBP12.39□□□□□ -0.43
PDPN-203ENST00000376061 USP17L8P0C7I0 530 aa12.39□□□□□ -0.43
PDPN-203ENST00000376061 RBM5P52756 815 aaKnown RBP eCLIP12.39□□□□□ -0.43
PDPN-203ENST00000376061 AK2P54819 239 aa12.39□□□□□ -0.43
PDPN-203ENST00000376061 EIF6P56537 245 aaKnown RBP12.39□□□□□ -0.43
PDPN-203ENST00000376061 CFAP100Q494V2 611 aa12.39□□□□□ -0.43
PDPN-203ENST00000376061 AKNAD1Q5T1N1 836 aa12.39□□□□□ -0.43
PDPN-203ENST00000376061 RALYLQ86SE5 291 aaKnown RBP12.39□□□□□ -0.43
PDPN-203ENST00000376061 MB21D2Q8IYB1 491 aaPredicted RBP12.39□□□□□ -0.43
PDPN-203ENST00000376061 ZNF579Q8NAF0 562 aaKnown RBP12.39□□□□□ -0.43
PDPN-203ENST00000376061 USP40Q9NVE5 1235 aa12.39□□□□□ -0.43
PDPN-203ENST00000376061 MCM9Q9NXL9 1143 aa12.39□□□□□ -0.43
PDPN-203ENST00000376061 HDAC9Q9UKV0 1011 aa12.39□□□□□ -0.43
PDPN-203ENST00000376061 UTRNP46939 3433 aa12.38□□□□□ -0.43
PDPN-203ENST00000376061 RPS12P25398 132 aaKnown RBP12.38□□□□□ -0.43
PDPN-203ENST00000376061 MCM2P49736 904 aa12.38□□□□□ -0.43
PDPN-203ENST00000376061 GMPSP49915 693 aaPredicted RBP12.38□□□□□ -0.43
PDPN-203ENST00000376061 C12orf60Q5U649 245 aa12.38□□□□□ -0.43
PDPN-203ENST00000376061 NOL8Q76FK4 1167 aaKnown RBP12.38□□□□□ -0.43
PDPN-203ENST00000376061 DHX32Q7L7V1 743 aaKnown RBP12.38□□□□□ -0.43
PDPN-203ENST00000376061 NCOA7Q8NI08 942 aa12.38□□□□□ -0.43
PDPN-203ENST00000376061 NKX2-3Q8TAU0 364 aa12.38□□□□□ -0.43
PDPN-203ENST00000376061 DDX4Q9NQI0 724 aaKnown RBP12.38□□□□□ -0.43
PDPN-203ENST00000376061 INCENPQ9NQS7 918 aa12.38□□□□□ -0.43
PDPN-203ENST00000376061 SAP30BPQ9UHR5 308 aaKnown RBP12.38□□□□□ -0.43
PDPN-203ENST00000376061 WDR19Q8NEZ3 1342 aa12.38□□□□□ -0.43
PDPN-203ENST00000376061 SHTN1A0MZ66 631 aa12.37□□□□□ -0.43
PDPN-203ENST00000376061 B4E1Z4 1266 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms